RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 DDX10Q13206 875 aaKnown RBP14.13□□□□□ -0.15
SHANK2-206ENST00000424924 UPF2Q9HAU5 1272 aaKnown RBP14.12□□□□□ -0.15
SHANK2-206ENST00000424924 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
SHANK2-206ENST00000424924 FKBP8Q14318 412 aa14.1□□□□□ -0.15
SHANK2-206ENST00000424924 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
SHANK2-206ENST00000424924 TSPY4P0CV99 314 aa14.09□□□□□ -0.15
SHANK2-206ENST00000424924 TSPY10P0CW01 314 aa14.09□□□□□ -0.15
SHANK2-206ENST00000424924 MLECQ14165 292 aa14.09□□□□□ -0.15
SHANK2-206ENST00000424924 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-206ENST00000424924 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
SHANK2-206ENST00000424924 SOX12O15370 315 aa14.05□□□□□ -0.16
SHANK2-206ENST00000424924 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
SHANK2-206ENST00000424924 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
SHANK2-206ENST00000424924 NBR1Q14596 966 aa14.04□□□□□ -0.16
SHANK2-206ENST00000424924 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
SHANK2-206ENST00000424924 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-206ENST00000424924 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
SHANK2-206ENST00000424924 CCDC136Q96JN2 1154 aa13.96□□□□□ -0.17
SHANK2-206ENST00000424924 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.18
SHANK2-206ENST00000424924 CLSTN1O94985 981 aa13.95□□□□□ -0.18
SHANK2-206ENST00000424924 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
SHANK2-206ENST00000424924 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
SHANK2-206ENST00000424924 ISY1Q9ULR0 285 aaKnown RBP13.93□□□□□ -0.18
SHANK2-206ENST00000424924 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
SHANK2-206ENST00000424924 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-206ENST00000424924 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
SHANK2-206ENST00000424924 POGKQ9P215 609 aa13.9□□□□□ -0.18
SHANK2-206ENST00000424924 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SHANK2-206ENST00000424924 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
SHANK2-206ENST00000424924 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
SHANK2-206ENST00000424924 SAFB2Q14151 953 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHANK2-206ENST00000424924 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
SHANK2-206ENST00000424924 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
SHANK2-206ENST00000424924 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-206ENST00000424924 OS9Q13438 667 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-206ENST00000424924 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
SHANK2-206ENST00000424924 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-206ENST00000424924 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
SHANK2-206ENST00000424924 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
SHANK2-206ENST00000424924 ZRSR1Q15695 479 aaKnown RBP13.8□□□□□ -0.2
SHANK2-206ENST00000424924 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
SHANK2-206ENST00000424924 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
SHANK2-206ENST00000424924 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.2
SHANK2-206ENST00000424924 STK26Q9P289 416 aa13.77□□□□□ -0.21
SHANK2-206ENST00000424924 FGD1P98174 961 aa13.76□□□□□ -0.21
SHANK2-206ENST00000424924 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
SHANK2-206ENST00000424924 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
SHANK2-206ENST00000424924 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-206ENST00000424924 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
SHANK2-206ENST00000424924 CFDP1Q9UEE9 299 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-206ENST00000424924 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
SHANK2-206ENST00000424924 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
SHANK2-206ENST00000424924 KCNJ4P48050 445 aa13.72□□□□□ -0.21
SHANK2-206ENST00000424924 CASC1Q6TDU7 716 aa13.72□□□□□ -0.21
SHANK2-206ENST00000424924 EIF4G2P78344 907 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHANK2-206ENST00000424924 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-206ENST00000424924 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-206ENST00000424924 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
SHANK2-206ENST00000424924 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
SHANK2-206ENST00000424924 PTMAP06454 111 aaKnown RBP13.69□□□□□ -0.22
SHANK2-206ENST00000424924 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
SHANK2-206ENST00000424924 GGT6Q6P531 493 aa13.69□□□□□ -0.22
SHANK2-206ENST00000424924 APBB1O00213 710 aa13.67□□□□□ -0.22
SHANK2-206ENST00000424924 PRM3Q9NNZ6 103 aa13.67□□□□□ -0.22
SHANK2-206ENST00000424924 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
SHANK2-206ENST00000424924 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
SHANK2-206ENST00000424924 RGS3P49796 1198 aa13.64□□□□□ -0.23
SHANK2-206ENST00000424924 PDE4CQ08493 712 aa13.64□□□□□ -0.23
SHANK2-206ENST00000424924 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-206ENST00000424924 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
SHANK2-206ENST00000424924 TRIM44Q96DX7 344 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-206ENST00000424924 G3V3G9 751 aa13.62□□□□□ -0.23
SHANK2-206ENST00000424924 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
SHANK2-206ENST00000424924 BECN1Q14457 450 aa13.62□□□□□ -0.23
SHANK2-206ENST00000424924 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
SHANK2-206ENST00000424924 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
SHANK2-206ENST00000424924 MSH5O43196 834 aa13.61□□□□□ -0.23
SHANK2-206ENST00000424924 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
SHANK2-206ENST00000424924 GLIPR1L2Q4G1C9 344 aa13.6□□□□□ -0.23
SHANK2-206ENST00000424924 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
SHANK2-206ENST00000424924 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
SHANK2-206ENST00000424924 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
SHANK2-206ENST00000424924 CHMP3Q9Y3E7 222 aa13.6□□□□□ -0.23
SHANK2-206ENST00000424924 MIER1Q8N108 512 aa13.59□□□□□ -0.23
SHANK2-206ENST00000424924 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
SHANK2-206ENST00000424924 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-206ENST00000424924 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
SHANK2-206ENST00000424924 DCAF11Q8TEB1 546 aa13.56□□□□□ -0.24
SHANK2-206ENST00000424924 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
SHANK2-206ENST00000424924 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
SHANK2-206ENST00000424924 LTV1Q96GA3 475 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-206ENST00000424924 CLIP1P30622 1438 aa13.54□□□□□ -0.24
SHANK2-206ENST00000424924 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
SHANK2-206ENST00000424924 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
SHANK2-206ENST00000424924 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
SHANK2-206ENST00000424924 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.24
SHANK2-206ENST00000424924 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
SHANK2-206ENST00000424924 KANK1Q14678 1352 aa13.51□□□□□ -0.25
SHANK2-206ENST00000424924 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
SHANK2-206ENST00000424924 MORC1Q86VD1 984 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms