RNA–Protein interactions for RNA: ENST00000424684.2

AC239800.3-201, humanhuman

TSL 5 BASIC

Gene AC239800.3, Length 5,243 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239800.3-201ENST00000424684 TRIM44Q96DX7 344 aaPredicted RBP19.64■□□□□ 0.73
AC239800.3-201ENST00000424684 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
AC239800.3-201ENST00000424684 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
AC239800.3-201ENST00000424684 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
AC239800.3-201ENST00000424684 CLIP1P30622 1438 aa19.54■□□□□ 0.72
AC239800.3-201ENST00000424684 HIRIP3Q9BW71 556 aaPredicted RBP19.54■□□□□ 0.72
AC239800.3-201ENST00000424684 CFAP53Q96M91 514 aa19.53■□□□□ 0.72
AC239800.3-201ENST00000424684 CDCA8Q53HL2 280 aa19.52■□□□□ 0.72
AC239800.3-201ENST00000424684 PPM1GO15355 546 aaPredicted RBP19.5■□□□□ 0.71
AC239800.3-201ENST00000424684 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
AC239800.3-201ENST00000424684 ZRSR1Q15695 479 aaKnown RBP19.48■□□□□ 0.71
AC239800.3-201ENST00000424684 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
AC239800.3-201ENST00000424684 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
AC239800.3-201ENST00000424684 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
AC239800.3-201ENST00000424684 CASC1Q6TDU7 716 aa19.46■□□□□ 0.71
AC239800.3-201ENST00000424684 PTMAP06454 111 aaKnown RBP19.46■□□□□ 0.71
AC239800.3-201ENST00000424684 PPP1R15AO75807 674 aaPredicted RBP19.45■□□□□ 0.7
AC239800.3-201ENST00000424684 ERICH6BQ5W0A0 696 aa19.45■□□□□ 0.7
AC239800.3-201ENST00000424684 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
AC239800.3-201ENST00000424684 A0A0G2JS52 829 aa19.43■□□□□ 0.7
AC239800.3-201ENST00000424684 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
AC239800.3-201ENST00000424684 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
AC239800.3-201ENST00000424684 FTSJ3Q8IY81 847 aaKnown RBP19.4■□□□□ 0.7
AC239800.3-201ENST00000424684 EEA1Q15075 1411 aa19.39■□□□□ 0.69
AC239800.3-201ENST00000424684 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
AC239800.3-201ENST00000424684 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
AC239800.3-201ENST00000424684 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
AC239800.3-201ENST00000424684 DNTTIP2Q5QJE6 756 aaKnown RBP19.36■□□□□ 0.69
AC239800.3-201ENST00000424684 CHMP4BQ9H444 224 aaKnown RBP19.35■□□□□ 0.69
AC239800.3-201ENST00000424684 PPP4R2Q9NY27 417 aa19.35■□□□□ 0.69
AC239800.3-201ENST00000424684 NUDCQ9Y266 331 aa19.34■□□□□ 0.69
AC239800.3-201ENST00000424684 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.69
AC239800.3-201ENST00000424684 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.68
AC239800.3-201ENST00000424684 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
AC239800.3-201ENST00000424684 MS4A1P11836 297 aa19.31■□□□□ 0.68
AC239800.3-201ENST00000424684 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
AC239800.3-201ENST00000424684 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
AC239800.3-201ENST00000424684 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
AC239800.3-201ENST00000424684 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
AC239800.3-201ENST00000424684 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
AC239800.3-201ENST00000424684 RGS3P49796 1198 aa19.25■□□□□ 0.67
AC239800.3-201ENST00000424684 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
AC239800.3-201ENST00000424684 NOP58Q9Y2X3 529 aaKnown RBP19.24■□□□□ 0.67
AC239800.3-201ENST00000424684 NAP1L5Q96NT1 182 aaPredicted RBP19.23■□□□□ 0.67
AC239800.3-201ENST00000424684 NRDCO43847 1150 aa19.23■□□□□ 0.67
AC239800.3-201ENST00000424684 HAP1P54257 671 aaPredicted RBP19.23■□□□□ 0.67
AC239800.3-201ENST00000424684 GOLGA6L6A8MZA4 724 aa19.22■□□□□ 0.67
AC239800.3-201ENST00000424684 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
AC239800.3-201ENST00000424684 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
AC239800.3-201ENST00000424684 FRAT1Q92837 279 aaPredicted RBP19.21■□□□□ 0.67
AC239800.3-201ENST00000424684 HSP90AB1P08238 724 aaKnown RBP19.2■□□□□ 0.66
AC239800.3-201ENST00000424684 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
AC239800.3-201ENST00000424684 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
AC239800.3-201ENST00000424684 PLCB2Q00722 1185 aa19.18■□□□□ 0.66
AC239800.3-201ENST00000424684 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
AC239800.3-201ENST00000424684 FGD1P98174 961 aa19.17■□□□□ 0.66
AC239800.3-201ENST00000424684 POGKQ9P215 609 aa19.16■□□□□ 0.66
AC239800.3-201ENST00000424684 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.66
AC239800.3-201ENST00000424684 OS9Q13438 667 aaPredicted RBP19.13■□□□□ 0.65
AC239800.3-201ENST00000424684 KCNJ4P48050 445 aa19.13■□□□□ 0.65
AC239800.3-201ENST00000424684 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
AC239800.3-201ENST00000424684 HSCBQ8IWL3 235 aa19.11■□□□□ 0.65
AC239800.3-201ENST00000424684 KIF27Q86VH2 1401 aa19.11■□□□□ 0.65
AC239800.3-201ENST00000424684 GOLGA6L4A6NEF3 574 aa19.11■□□□□ 0.65
AC239800.3-201ENST00000424684 CFAP44Q96MT7 982 aa19.1■□□□□ 0.65
AC239800.3-201ENST00000424684 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
AC239800.3-201ENST00000424684 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
AC239800.3-201ENST00000424684 SIN3AQ96ST3 1273 aa19.09■□□□□ 0.65
AC239800.3-201ENST00000424684 ARID4BQ4LE39 1312 aaPredicted RBP19.09■□□□□ 0.65
AC239800.3-201ENST00000424684 TMF1P82094 1093 aa19.09■□□□□ 0.65
AC239800.3-201ENST00000424684 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
AC239800.3-201ENST00000424684 B4GALNT3Q6L9W6 998 aa19.08■□□□□ 0.65
AC239800.3-201ENST00000424684 CHAF1AQ13111 956 aaPredicted RBP19.08■□□□□ 0.65
AC239800.3-201ENST00000424684 L1TD1Q5T7N2 865 aaKnown RBP19.08■□□□□ 0.65
AC239800.3-201ENST00000424684 CC2D1BQ5T0F9 858 aaKnown RBP19.07■□□□□ 0.64
AC239800.3-201ENST00000424684 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
AC239800.3-201ENST00000424684 MCCP23508 829 aa19.05■□□□□ 0.64
AC239800.3-201ENST00000424684 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
AC239800.3-201ENST00000424684 LMOD2Q6P5Q4 547 aa19.04■□□□□ 0.64
AC239800.3-201ENST00000424684 TULP1O00294 542 aaPredicted RBP19.03■□□□□ 0.64
AC239800.3-201ENST00000424684 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.63
AC239800.3-201ENST00000424684 NAP1L2Q9ULW6 460 aaPredicted RBP19.02■□□□□ 0.63
AC239800.3-201ENST00000424684 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
AC239800.3-201ENST00000424684 NPHP1O15259 732 aa19■□□□□ 0.63
AC239800.3-201ENST00000424684 GOLGA2Q08379 1002 aa18.99■□□□□ 0.63
AC239800.3-201ENST00000424684 TAOK2Q9UL54 1235 aa18.98■□□□□ 0.63
AC239800.3-201ENST00000424684 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
AC239800.3-201ENST00000424684 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
AC239800.3-201ENST00000424684 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
AC239800.3-201ENST00000424684 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
AC239800.3-201ENST00000424684 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
AC239800.3-201ENST00000424684 HDGFP51858 240 aaKnown RBP18.94■□□□□ 0.62
AC239800.3-201ENST00000424684 IPO8O15397 1037 aaKnown RBP18.94■□□□□ 0.62
AC239800.3-201ENST00000424684 PTMSP20962 102 aa18.94■□□□□ 0.62
AC239800.3-201ENST00000424684 KANK1Q14678 1352 aa18.94■□□□□ 0.62
AC239800.3-201ENST00000424684 DEKP35659 375 aaKnown RBP18.91■□□□□ 0.62
AC239800.3-201ENST00000424684 DRC7Q8IY82 874 aa18.91■□□□□ 0.62
AC239800.3-201ENST00000424684 GBP4Q96PP9 640 aa18.9■□□□□ 0.62
AC239800.3-201ENST00000424684 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
AC239800.3-201ENST00000424684 RBM19Q9Y4C8 960 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms