RNA–Protein interactions for RNA: ENST00000414817.2

PCNPP4-201, Transcript of PEST containing nuclear protein pseudogene 4, humanhuman

BASIC

Gene PCNPP4, Length 517 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP4-201ENST00000414817 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
PCNPP4-201ENST00000414817 FAM212AQ96EL1 285 aa15.44■□□□□ 0.06
PCNPP4-201ENST00000414817 GALR2O43603 387 aaPredicted RBP15.42■□□□□ 0.06
PCNPP4-201ENST00000414817 IFNLR1Q8IU57 520 aaPredicted RBP15.38■□□□□ 0.05
PCNPP4-201ENST00000414817 DCBLD2Q96PD2 775 aa15.36■□□□□ 0.05
PCNPP4-201ENST00000414817 KIF12Q96FN5 646 aa15.35■□□□□ 0.05
PCNPP4-201ENST00000414817 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
PCNPP4-201ENST00000414817 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
PCNPP4-201ENST00000414817 POTEIP0CG38 1075 aa15.31■□□□□ 0.04
PCNPP4-201ENST00000414817 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
PCNPP4-201ENST00000414817 MAP3K13O43283 966 aa15.28■□□□□ 0.04
PCNPP4-201ENST00000414817 GSE1Q14687 1217 aa15.26■□□□□ 0.03
PCNPP4-201ENST00000414817 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
PCNPP4-201ENST00000414817 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
PCNPP4-201ENST00000414817 PYGBP11216 843 aa15.17■□□□□ 0.02
PCNPP4-201ENST00000414817 ASTLQ6HA08 431 aaPredicted RBP15.15■□□□□ 0.02
PCNPP4-201ENST00000414817 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
PCNPP4-201ENST00000414817 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
PCNPP4-201ENST00000414817 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
PCNPP4-201ENST00000414817 TRPC6Q9Y210 931 aa15.12■□□□□ 0.01
PCNPP4-201ENST00000414817 TIE1P35590 1138 aa15.11■□□□□ 0.01
PCNPP4-201ENST00000414817 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
PCNPP4-201ENST00000414817 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
PCNPP4-201ENST00000414817 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
PCNPP4-201ENST00000414817 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
PCNPP4-201ENST00000414817 TTLL13PA6NNM8 815 aa15.02■□□□□ -0
PCNPP4-201ENST00000414817 ZNF467Q7Z7K2 595 aaPredicted RBP15.02■□□□□ -0
PCNPP4-201ENST00000414817 LHX8Q68G74 356 aa15.01□□□□□ -0.01
PCNPP4-201ENST00000414817 SLC39A7Q92504 469 aa15.01□□□□□ -0.01
PCNPP4-201ENST00000414817 PCDHB8Q9UN66 801 aa15.01□□□□□ -0.01
PCNPP4-201ENST00000414817 TRIM41Q8WV44 630 aa15□□□□□ -0.01
PCNPP4-201ENST00000414817 C7P10643 843 aa14.97□□□□□ -0.01
PCNPP4-201ENST00000414817 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
PCNPP4-201ENST00000414817 METRNQ9UJH8 293 aa14.97□□□□□ -0.01
PCNPP4-201ENST00000414817 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
PCNPP4-201ENST00000414817 IER5LQ5T953 404 aa14.86□□□□□ -0.03
PCNPP4-201ENST00000414817 PSEN1P49768 467 aa14.84□□□□□ -0.03
PCNPP4-201ENST00000414817 PDAP1Q13442 181 aaKnown RBP14.84□□□□□ -0.03
PCNPP4-201ENST00000414817 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
PCNPP4-201ENST00000414817 SEC24BO95487 1268 aa14.79□□□□□ -0.04
PCNPP4-201ENST00000414817 POTEFA5A3E0 1075 aa14.77□□□□□ -0.05
PCNPP4-201ENST00000414817 RIOK3O14730 519 aaKnown RBP14.75□□□□□ -0.05
PCNPP4-201ENST00000414817 COLQQ9Y215 455 aaPredicted RBP14.75□□□□□ -0.05
PCNPP4-201ENST00000414817 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
PCNPP4-201ENST00000414817 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
PCNPP4-201ENST00000414817 ECM2O94769 699 aaPredicted RBP14.72□□□□□ -0.05
PCNPP4-201ENST00000414817 PLCG2P16885 1265 aa14.71□□□□□ -0.05
PCNPP4-201ENST00000414817 IRX5P78411 483 aaPredicted RBP14.7□□□□□ -0.06
PCNPP4-201ENST00000414817 MKRN3Q13064 507 aaKnown RBP14.7□□□□□ -0.06
PCNPP4-201ENST00000414817 PKD2Q13563 968 aa14.7□□□□□ -0.06
PCNPP4-201ENST00000414817 VGFO15240 615 aaPredicted RBP14.67□□□□□ -0.06
PCNPP4-201ENST00000414817 POTEJP0CG39 1038 aa14.67□□□□□ -0.06
PCNPP4-201ENST00000414817 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
PCNPP4-201ENST00000414817 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
PCNPP4-201ENST00000414817 OCEL1Q9H607 264 aa14.66□□□□□ -0.06
PCNPP4-201ENST00000414817 CABP2Q9NPB3 220 aa14.65□□□□□ -0.06
PCNPP4-201ENST00000414817 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
PCNPP4-201ENST00000414817 SCUBE2Q9NQ36 999 aa14.62□□□□□ -0.07
PCNPP4-201ENST00000414817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
PCNPP4-201ENST00000414817 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
PCNPP4-201ENST00000414817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.58□□□□□ -0.08
PCNPP4-201ENST00000414817 RGL2O15211 777 aa14.57□□□□□ -0.08
PCNPP4-201ENST00000414817 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
PCNPP4-201ENST00000414817 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
PCNPP4-201ENST00000414817 EFCAB3Q8N7B9 438 aa14.52□□□□□ -0.09
PCNPP4-201ENST00000414817 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
PCNPP4-201ENST00000414817 L3MBTL3Q96JM7 780 aaPredicted RBP14.47□□□□□ -0.09
PCNPP4-201ENST00000414817 STK25O00506 426 aa14.46□□□□□ -0.09
PCNPP4-201ENST00000414817 STK24Q9Y6E0 443 aa14.46□□□□□ -0.09
PCNPP4-201ENST00000414817 SOX12O15370 315 aa14.44□□□□□ -0.1
PCNPP4-201ENST00000414817 DPY19L2Q6NUT2 758 aa14.4□□□□□ -0.1
PCNPP4-201ENST00000414817 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
PCNPP4-201ENST00000414817 C3orf67Q6ZVT6 689 aa14.38□□□□□ -0.11
PCNPP4-201ENST00000414817 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
PCNPP4-201ENST00000414817 G3V3G9 751 aa14.37□□□□□ -0.11
PCNPP4-201ENST00000414817 PHF8Q9UPP1 1060 aa14.36□□□□□ -0.11
PCNPP4-201ENST00000414817 BOLA1Q9Y3E2 137 aa14.35□□□□□ -0.11
PCNPP4-201ENST00000414817 NLRP6P59044 892 aa14.33□□□□□ -0.12
PCNPP4-201ENST00000414817 MS4A4AQ96JQ5 239 aa14.31□□□□□ -0.12
PCNPP4-201ENST00000414817 HS6ST3Q8IZP7 471 aa14.3□□□□□ -0.12
PCNPP4-201ENST00000414817 FBXO22Q8NEZ5 403 aa14.28□□□□□ -0.12
PCNPP4-201ENST00000414817 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
PCNPP4-201ENST00000414817 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
PCNPP4-201ENST00000414817 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
PCNPP4-201ENST00000414817 MICALL2Q8IY33 904 aa14.23□□□□□ -0.13
PCNPP4-201ENST00000414817 FAM163AQ96GL9 167 aaPredicted RBP14.21□□□□□ -0.13
PCNPP4-201ENST00000414817 SNPHO15079 494 aa14.18□□□□□ -0.14
PCNPP4-201ENST00000414817 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
PCNPP4-201ENST00000414817 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
PCNPP4-201ENST00000414817 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
PCNPP4-201ENST00000414817 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
PCNPP4-201ENST00000414817 POTEMA6NI47 508 aa14.09□□□□□ -0.15
PCNPP4-201ENST00000414817 POTEGQ6S5H5 508 aa14.09□□□□□ -0.15
PCNPP4-201ENST00000414817 ST18O60284 1047 aa14.07□□□□□ -0.16
PCNPP4-201ENST00000414817 TMEM92Q6UXU6 159 aa14.07□□□□□ -0.16
PCNPP4-201ENST00000414817 NKX1-1Q15270 411 aaPredicted RBP14.06□□□□□ -0.16
PCNPP4-201ENST00000414817 RTN4Q9NQC3 1192 aaKnown RBP14.04□□□□□ -0.16
PCNPP4-201ENST00000414817 RYDENQ9NUL5 291 aaKnown RBP14.04□□□□□ -0.16
PCNPP4-201ENST00000414817 PPP1R37O75864 691 aa14.03□□□□□ -0.16
PCNPP4-201ENST00000414817 HOXB3P14651 431 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms