RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 MNX1P50219 401 aaPredicted RBP6.73□□□□□ -1.33
RNU4-43P-201ENST00000410628 SCUBE2Q9NQ36 999 aa6.71□□□□□ -1.34
RNU4-43P-201ENST00000410628 PELP1Q8IZL8 1130 aaKnown RBP6.68□□□□□ -1.34
RNU4-43P-201ENST00000410628 PAK3O75914 559 aaPredicted RBP6.67□□□□□ -1.34
RNU4-43P-201ENST00000410628 NPM1P06748 294 aaKnown RBP eCLIP6.66□□□□□ -1.34
RNU4-43P-201ENST00000410628 TSPYL2Q9H2G4 693 aaPredicted RBP6.66□□□□□ -1.34
RNU4-43P-201ENST00000410628 SPNS2Q8IVW8 549 aa6.65□□□□□ -1.34
RNU4-43P-201ENST00000410628 MS4A3Q96HJ5 214 aa6.65□□□□□ -1.34
RNU4-43P-201ENST00000410628 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
RNU4-43P-201ENST00000410628 PROM2Q8N271 834 aa6.63□□□□□ -1.35
RNU4-43P-201ENST00000410628 TRPC6Q9Y210 931 aa6.6□□□□□ -1.35
RNU4-43P-201ENST00000410628 POTEJP0CG39 1038 aa6.58□□□□□ -1.36
RNU4-43P-201ENST00000410628 C7P10643 843 aa6.58□□□□□ -1.36
RNU4-43P-201ENST00000410628 SLC39A7Q92504 469 aa6.58□□□□□ -1.36
RNU4-43P-201ENST00000410628 ATMINO43313 823 aaPredicted RBP6.57□□□□□ -1.36
RNU4-43P-201ENST00000410628 MIER1Q8N108 512 aa6.57□□□□□ -1.36
RNU4-43P-201ENST00000410628 CCDC61Q9Y6R9 512 aa6.57□□□□□ -1.36
RNU4-43P-201ENST00000410628 RASEFQ8IZ41 740 aa6.56□□□□□ -1.36
RNU4-43P-201ENST00000410628 ATN1P54259 1190 aaPredicted RBP6.55□□□□□ -1.36
RNU4-43P-201ENST00000410628 ASTLQ6HA08 431 aaPredicted RBP6.55□□□□□ -1.36
RNU4-43P-201ENST00000410628 KIF12Q96FN5 646 aa6.54□□□□□ -1.36
RNU4-43P-201ENST00000410628 MAP3K13O43283 966 aa6.53□□□□□ -1.36
RNU4-43P-201ENST00000410628 BMP2KQ9NSY1 1161 aaPredicted RBP6.51□□□□□ -1.37
RNU4-43P-201ENST00000410628 POTEFA5A3E0 1075 aa6.5□□□□□ -1.37
RNU4-43P-201ENST00000410628 PLCD3Q8N3E9 789 aa6.5□□□□□ -1.37
RNU4-43P-201ENST00000410628 FKBP8Q14318 412 aa6.48□□□□□ -1.37
RNU4-43P-201ENST00000410628 PLEKHG5O94827 1062 aa6.47□□□□□ -1.37
RNU4-43P-201ENST00000410628 COLQQ9Y215 455 aaPredicted RBP6.46□□□□□ -1.38
RNU4-43P-201ENST00000410628 ST18O60284 1047 aa6.45□□□□□ -1.38
RNU4-43P-201ENST00000410628 TTLL13PA6NNM8 815 aa6.44□□□□□ -1.38
RNU4-43P-201ENST00000410628 NUBP1P53384 320 aa6.44□□□□□ -1.38
RNU4-43P-201ENST00000410628 PCDHB13Q9Y5F0 798 aa6.43□□□□□ -1.38
RNU4-43P-201ENST00000410628 TIE1P35590 1138 aa6.41□□□□□ -1.38
RNU4-43P-201ENST00000410628 IFNL1Q8IU54 200 aa6.41□□□□□ -1.38
RNU4-43P-201ENST00000410628 TRIM35Q9UPQ4 493 aa6.41□□□□□ -1.38
RNU4-43P-201ENST00000410628 SEC24BO95487 1268 aa6.39□□□□□ -1.39
RNU4-43P-201ENST00000410628 PYGBP11216 843 aa6.37□□□□□ -1.39
RNU4-43P-201ENST00000410628 TMEM106CQ9BVX2 250 aa6.37□□□□□ -1.39
RNU4-43P-201ENST00000410628 FAM212AQ96EL1 285 aa6.36□□□□□ -1.39
RNU4-43P-201ENST00000410628 DCAF8Q5TAQ9 597 aa6.35□□□□□ -1.39
RNU4-43P-201ENST00000410628 PCDHB8Q9UN66 801 aa6.35□□□□□ -1.39
RNU4-43P-201ENST00000410628 SLAIN1Q8ND83 568 aa6.34□□□□□ -1.39
RNU4-43P-201ENST00000410628 TMEM121BQ9BXQ6 578 aaPredicted RBP6.34□□□□□ -1.39
RNU4-43P-201ENST00000410628 ZBTB47Q9UFB7 747 aaPredicted RBP6.33□□□□□ -1.4
RNU4-43P-201ENST00000410628 SGIP1Q9BQI5 828 aa6.31□□□□□ -1.4
RNU4-43P-201ENST00000410628 PLCG2P16885 1265 aa6.29□□□□□ -1.4
RNU4-43P-201ENST00000410628 IER5LQ5T953 404 aa6.29□□□□□ -1.4
RNU4-43P-201ENST00000410628 MARVELD3Q96A59 401 aa6.29□□□□□ -1.4
RNU4-43P-201ENST00000410628 IRX5P78411 483 aaPredicted RBP6.28□□□□□ -1.4
RNU4-43P-201ENST00000410628 KLHL34Q8N239 644 aa6.28□□□□□ -1.4
RNU4-43P-201ENST00000410628 VASPP50552 380 aaPredicted RBP6.26□□□□□ -1.41
RNU4-43P-201ENST00000410628 SNPHO15079 494 aa6.24□□□□□ -1.41
RNU4-43P-201ENST00000410628 FBXO3Q9UK99 471 aa6.23□□□□□ -1.41
RNU4-43P-201ENST00000410628 OCEL1Q9H607 264 aa6.22□□□□□ -1.41
RNU4-43P-201ENST00000410628 EMP3P54852 163 aa6.21□□□□□ -1.42
RNU4-43P-201ENST00000410628 RNF166Q96A37 237 aaPredicted RBP6.21□□□□□ -1.42
RNU4-43P-201ENST00000410628 PDCD7Q8N8D1 485 aaKnown RBP6.2□□□□□ -1.42
RNU4-43P-201ENST00000410628 IFNLR1Q8IU57 520 aaPredicted RBP6.18□□□□□ -1.42
RNU4-43P-201ENST00000410628 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
RNU4-43P-201ENST00000410628 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
RNU4-43P-201ENST00000410628 PSEN1P49768 467 aa6.17□□□□□ -1.42
RNU4-43P-201ENST00000410628 GSE1Q14687 1217 aa6.17□□□□□ -1.42
RNU4-43P-201ENST00000410628 DPY19L2Q6NUT2 758 aa6.17□□□□□ -1.42
RNU4-43P-201ENST00000410628 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.17□□□□□ -1.42
RNU4-43P-201ENST00000410628 CIZ1Q9ULV3 898 aaPredicted RBP6.17□□□□□ -1.42
RNU4-43P-201ENST00000410628 GOLGA2Q08379 1002 aa6.16□□□□□ -1.42
RNU4-43P-201ENST00000410628 MKRN3Q13064 507 aaKnown RBP6.16□□□□□ -1.42
RNU4-43P-201ENST00000410628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU4-43P-201ENST00000410628 ZNF467Q7Z7K2 595 aaPredicted RBP6.15□□□□□ -1.42
RNU4-43P-201ENST00000410628 FAM205CA6NFA0 338 aa6.13□□□□□ -1.43
RNU4-43P-201ENST00000410628 C3orf67Q6ZVT6 689 aa6.13□□□□□ -1.43
RNU4-43P-201ENST00000410628 HS3ST6Q96QI5 342 aa6.13□□□□□ -1.43
RNU4-43P-201ENST00000410628 CABP2Q9NPB3 220 aa6.13□□□□□ -1.43
RNU4-43P-201ENST00000410628 CHRM1P11229 460 aaPredicted RBP6.12□□□□□ -1.43
RNU4-43P-201ENST00000410628 POTEB3A0JP26 581 aa6.11□□□□□ -1.43
RNU4-43P-201ENST00000410628 POTEBQ6S5H4 581 aa6.11□□□□□ -1.43
RNU4-43P-201ENST00000410628 SPOCK2Q92563 424 aa6.11□□□□□ -1.43
RNU4-43P-201ENST00000410628 PDAP1Q13442 181 aaKnown RBP6.1□□□□□ -1.43
RNU4-43P-201ENST00000410628 MYT1LQ9UL68 1186 aa6.09□□□□□ -1.43
RNU4-43P-201ENST00000410628 L3MBTL3Q96JM7 780 aaPredicted RBP6.08□□□□□ -1.44
RNU4-43P-201ENST00000410628 ILDR1Q86SU0 546 aaPredicted RBP6.05□□□□□ -1.44
RNU4-43P-201ENST00000410628 EFCAB3Q8N7B9 438 aa6.05□□□□□ -1.44
RNU4-43P-201ENST00000410628 BOLA1Q9Y3E2 137 aa6.05□□□□□ -1.44
RNU4-43P-201ENST00000410628 HOXB3P14651 431 aaPredicted RBP6.03□□□□□ -1.44
RNU4-43P-201ENST00000410628 G3V3G9 751 aa6.01□□□□□ -1.45
RNU4-43P-201ENST00000410628 RNF25Q96BH1 459 aaPredicted RBP6.01□□□□□ -1.45
RNU4-43P-201ENST00000410628 TMEM92Q6UXU6 159 aa6□□□□□ -1.45
RNU4-43P-201ENST00000410628 PLA2G2EQ9NZK7 142 aa5.98□□□□□ -1.45
RNU4-43P-201ENST00000410628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.97□□□□□ -1.45
RNU4-43P-201ENST00000410628 ZNF710Q8N1W2 664 aa5.97□□□□□ -1.45
RNU4-43P-201ENST00000410628 ZFP91Q96JP5 570 aaPredicted RBP5.97□□□□□ -1.45
RNU4-43P-201ENST00000410628 MS4A4AQ96JQ5 239 aa5.97□□□□□ -1.45
RNU4-43P-201ENST00000410628 PHF8Q9UPP1 1060 aa5.97□□□□□ -1.45
RNU4-43P-201ENST00000410628 MICALL2Q8IY33 904 aa5.96□□□□□ -1.46
RNU4-43P-201ENST00000410628 RIOK3O14730 519 aaKnown RBP5.95□□□□□ -1.46
RNU4-43P-201ENST00000410628 ERBB3P21860 1342 aa5.95□□□□□ -1.46
RNU4-43P-201ENST00000410628 HOXB1P14653 301 aaPredicted RBP5.94□□□□□ -1.46
RNU4-43P-201ENST00000410628 VARS2Q5ST30 1063 aaKnown RBP5.94□□□□□ -1.46
RNU4-43P-201ENST00000410628 PTGER2P43116 358 aa5.93□□□□□ -1.46
RNU4-43P-201ENST00000410628 KHSRPQ92945 711 aaKnown RBP eCLIP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms