RNA–Protein interactions for RNA: ENST00000409060.1

MED20-203, Transcript of mediator complex subunit 20, humanhuman

TSL 2 BASIC

Gene MED20, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED20-203ENST00000409060 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
MED20-203ENST00000409060 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
MED20-203ENST00000409060 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
MED20-203ENST00000409060 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
MED20-203ENST00000409060 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
MED20-203ENST00000409060 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
MED20-203ENST00000409060 CFTRP13569 1480 aa17.86■□□□□ 0.45
MED20-203ENST00000409060 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
MED20-203ENST00000409060 CYB5RLQ6IPT4 315 aa17.79■□□□□ 0.44
MED20-203ENST00000409060 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
MED20-203ENST00000409060 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
MED20-203ENST00000409060 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
MED20-203ENST00000409060 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
MED20-203ENST00000409060 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
MED20-203ENST00000409060 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
MED20-203ENST00000409060 REM2Q8IYK8 340 aaPredicted RBP17.68■□□□□ 0.42
MED20-203ENST00000409060 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
MED20-203ENST00000409060 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
MED20-203ENST00000409060 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
MED20-203ENST00000409060 CHD1O14646 1710 aa17.61■□□□□ 0.41
MED20-203ENST00000409060 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
MED20-203ENST00000409060 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
MED20-203ENST00000409060 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
MED20-203ENST00000409060 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
MED20-203ENST00000409060 SPDYE1Q8NFV5 336 aaPredicted RBP17.56■□□□□ 0.4
MED20-203ENST00000409060 VASPP50552 380 aaPredicted RBP17.5■□□□□ 0.39
MED20-203ENST00000409060 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
MED20-203ENST00000409060 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
MED20-203ENST00000409060 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
MED20-203ENST00000409060 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
MED20-203ENST00000409060 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
MED20-203ENST00000409060 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
MED20-203ENST00000409060 TDRD9Q8NDG6 1382 aaKnown RBP17.42■□□□□ 0.38
MED20-203ENST00000409060 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
MED20-203ENST00000409060 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
MED20-203ENST00000409060 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
MED20-203ENST00000409060 SOGA1O94964 1423 aa17.36■□□□□ 0.37
MED20-203ENST00000409060 PRR29P0C7W0 189 aa17.33■□□□□ 0.36
MED20-203ENST00000409060 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
MED20-203ENST00000409060 IFNLR1Q8IU57 520 aaPredicted RBP17.3■□□□□ 0.36
MED20-203ENST00000409060 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
MED20-203ENST00000409060 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
MED20-203ENST00000409060 MIER1Q8N108 512 aa17.27■□□□□ 0.36
MED20-203ENST00000409060 PLCD3Q8N3E9 789 aa17.26■□□□□ 0.35
MED20-203ENST00000409060 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
MED20-203ENST00000409060 GAPVD1Q14C86 1478 aa17.22■□□□□ 0.35
MED20-203ENST00000409060 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
MED20-203ENST00000409060 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
MED20-203ENST00000409060 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
MED20-203ENST00000409060 SYNJ2O15056 1496 aa17.19■□□□□ 0.34
MED20-203ENST00000409060 CUX1P39880 1505 aa17.17■□□□□ 0.34
MED20-203ENST00000409060 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
MED20-203ENST00000409060 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
MED20-203ENST00000409060 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
MED20-203ENST00000409060 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
MED20-203ENST00000409060 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
MED20-203ENST00000409060 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
MED20-203ENST00000409060 MNX1P50219 401 aaPredicted RBP17.07■□□□□ 0.32
MED20-203ENST00000409060 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
MED20-203ENST00000409060 PIP4P2Q8N4L2 257 aa17.05■□□□□ 0.32
MED20-203ENST00000409060 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
MED20-203ENST00000409060 RTN4Q9NQC3 1192 aaKnown RBP17.04■□□□□ 0.32
MED20-203ENST00000409060 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
MED20-203ENST00000409060 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
MED20-203ENST00000409060 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
MED20-203ENST00000409060 CEP170Q5SW79 1584 aa17■□□□□ 0.31
MED20-203ENST00000409060 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
MED20-203ENST00000409060 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
MED20-203ENST00000409060 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
MED20-203ENST00000409060 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.31
MED20-203ENST00000409060 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
MED20-203ENST00000409060 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
MED20-203ENST00000409060 NUP160Q12769 1436 aa16.91■□□□□ 0.3
MED20-203ENST00000409060 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
MED20-203ENST00000409060 NUBP1P53384 320 aa16.89■□□□□ 0.29
MED20-203ENST00000409060 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
MED20-203ENST00000409060 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
MED20-203ENST00000409060 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
MED20-203ENST00000409060 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
MED20-203ENST00000409060 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
MED20-203ENST00000409060 JPH4Q96JJ6 628 aa16.83■□□□□ 0.28
MED20-203ENST00000409060 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
MED20-203ENST00000409060 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
MED20-203ENST00000409060 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
MED20-203ENST00000409060 PKD2Q13563 968 aa16.79■□□□□ 0.28
MED20-203ENST00000409060 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
MED20-203ENST00000409060 TSPOAP1O95153 1857 aa16.79■□□□□ 0.28
MED20-203ENST00000409060 ABCC10Q5T3U5 1492 aa16.78■□□□□ 0.28
MED20-203ENST00000409060 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
MED20-203ENST00000409060 KDM6BO15054 1643 aa16.75■□□□□ 0.27
MED20-203ENST00000409060 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
MED20-203ENST00000409060 DIP2BQ9P265 1576 aa16.74■□□□□ 0.27
MED20-203ENST00000409060 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
MED20-203ENST00000409060 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
MED20-203ENST00000409060 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
MED20-203ENST00000409060 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
MED20-203ENST00000409060 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
MED20-203ENST00000409060 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
MED20-203ENST00000409060 GSE1Q14687 1217 aa16.69■□□□□ 0.26
MED20-203ENST00000409060 FAM212AQ96EL1 285 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms