RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 WDR43Q15061 677 aaKnown RBP eCLIP19.5■□□□□ 0.71
PCNX4-203ENST00000406854 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
PCNX4-203ENST00000406854 SUPT16HQ9Y5B9 1047 aaKnown RBP19.46■□□□□ 0.71
PCNX4-203ENST00000406854 ANP32BQ92688 251 aaKnown RBP19.45■□□□□ 0.7
PCNX4-203ENST00000406854 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
PCNX4-203ENST00000406854 ANP32EQ9BTT0 268 aa19.42■□□□□ 0.7
PCNX4-203ENST00000406854 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
PCNX4-203ENST00000406854 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
PCNX4-203ENST00000406854 STAG3Q9UJ98 1225 aa19.36■□□□□ 0.69
PCNX4-203ENST00000406854 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.69
PCNX4-203ENST00000406854 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
PCNX4-203ENST00000406854 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
PCNX4-203ENST00000406854 SOGA1O94964 1423 aa19.31■□□□□ 0.68
PCNX4-203ENST00000406854 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
PCNX4-203ENST00000406854 NACADO15069 1562 aa19.3■□□□□ 0.68
PCNX4-203ENST00000406854 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
PCNX4-203ENST00000406854 ARXQ96QS3 562 aa19.29■□□□□ 0.68
PCNX4-203ENST00000406854 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
PCNX4-203ENST00000406854 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
PCNX4-203ENST00000406854 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
PCNX4-203ENST00000406854 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCNX4-203ENST00000406854 PLEKHD1A6NEE1 506 aa19.26■□□□□ 0.67
PCNX4-203ENST00000406854 DDRGK1Q96HY6 314 aa19.25■□□□□ 0.67
PCNX4-203ENST00000406854 BAZ1AQ9NRL2 1556 aaPredicted RBP19.25■□□□□ 0.67
PCNX4-203ENST00000406854 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
PCNX4-203ENST00000406854 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
PCNX4-203ENST00000406854 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
PCNX4-203ENST00000406854 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
PCNX4-203ENST00000406854 BECN1Q14457 450 aa19.18■□□□□ 0.66
PCNX4-203ENST00000406854 CCER2I3L3R5 266 aa19.17■□□□□ 0.66
PCNX4-203ENST00000406854 GLIPR1L2Q4G1C9 344 aa19.16■□□□□ 0.66
PCNX4-203ENST00000406854 B4GALNT3Q6L9W6 998 aa19.16■□□□□ 0.66
PCNX4-203ENST00000406854 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
PCNX4-203ENST00000406854 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.66
PCNX4-203ENST00000406854 KCNH8Q96L42 1107 aa19.14■□□□□ 0.65
PCNX4-203ENST00000406854 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
PCNX4-203ENST00000406854 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
PCNX4-203ENST00000406854 KANK4Q5T7N3 995 aaPredicted RBP19.12■□□□□ 0.65
PCNX4-203ENST00000406854 MYH16Q9H6N6 1097 aa19.12■□□□□ 0.65
PCNX4-203ENST00000406854 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
PCNX4-203ENST00000406854 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
PCNX4-203ENST00000406854 SETD5Q9C0A6 1442 aa19.09■□□□□ 0.65
PCNX4-203ENST00000406854 RBM19Q9Y4C8 960 aaKnown RBP19.08■□□□□ 0.64
PCNX4-203ENST00000406854 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
PCNX4-203ENST00000406854 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
PCNX4-203ENST00000406854 CFAP53Q96M91 514 aa19.06■□□□□ 0.64
PCNX4-203ENST00000406854 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
PCNX4-203ENST00000406854 RGS3P49796 1198 aa19.03■□□□□ 0.64
PCNX4-203ENST00000406854 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
PCNX4-203ENST00000406854 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
PCNX4-203ENST00000406854 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
PCNX4-203ENST00000406854 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.64
PCNX4-203ENST00000406854 CUX2O14529 1486 aa19.02■□□□□ 0.63
PCNX4-203ENST00000406854 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.63
PCNX4-203ENST00000406854 TRIM44Q96DX7 344 aaPredicted RBP19■□□□□ 0.63
PCNX4-203ENST00000406854 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
PCNX4-203ENST00000406854 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
PCNX4-203ENST00000406854 GOLGA6L22H0YM25 854 aa18.98■□□□□ 0.63
PCNX4-203ENST00000406854 FTSJ3Q8IY81 847 aaKnown RBP18.98■□□□□ 0.63
PCNX4-203ENST00000406854 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
PCNX4-203ENST00000406854 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
PCNX4-203ENST00000406854 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
PCNX4-203ENST00000406854 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
PCNX4-203ENST00000406854 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
PCNX4-203ENST00000406854 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
PCNX4-203ENST00000406854 TMF1P82094 1093 aa18.91■□□□□ 0.62
PCNX4-203ENST00000406854 RTN4Q9NQC3 1192 aaKnown RBP18.89■□□□□ 0.62
PCNX4-203ENST00000406854 FOXD1Q16676 465 aa18.89■□□□□ 0.61
PCNX4-203ENST00000406854 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
PCNX4-203ENST00000406854 NCLP19338 710 aaKnown RBP18.89■□□□□ 0.61
PCNX4-203ENST00000406854 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
PCNX4-203ENST00000406854 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
PCNX4-203ENST00000406854 DEKP35659 375 aaKnown RBP18.86■□□□□ 0.61
PCNX4-203ENST00000406854 PKD2Q13563 968 aa18.85■□□□□ 0.61
PCNX4-203ENST00000406854 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
PCNX4-203ENST00000406854 MS4A1P11836 297 aa18.82■□□□□ 0.6
PCNX4-203ENST00000406854 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
PCNX4-203ENST00000406854 CASC1Q6TDU7 716 aa18.79■□□□□ 0.6
PCNX4-203ENST00000406854 RCAN3Q9UKA8 241 aa18.79■□□□□ 0.6
PCNX4-203ENST00000406854 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
PCNX4-203ENST00000406854 C14orf37Q86TY3 774 aa18.77■□□□□ 0.6
PCNX4-203ENST00000406854 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.6
PCNX4-203ENST00000406854 L3MBTL2Q969R5 705 aa18.77■□□□□ 0.6
PCNX4-203ENST00000406854 POGKQ9P215 609 aa18.77■□□□□ 0.6
PCNX4-203ENST00000406854 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
PCNX4-203ENST00000406854 CHMP4BQ9H444 224 aaKnown RBP18.76■□□□□ 0.59
PCNX4-203ENST00000406854 PTMAP06454 111 aaKnown RBP18.76■□□□□ 0.59
PCNX4-203ENST00000406854 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
PCNX4-203ENST00000406854 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
PCNX4-203ENST00000406854 RALBP1Q15311 655 aa18.74■□□□□ 0.59
PCNX4-203ENST00000406854 TCERG1O14776 1098 aaKnown RBP18.73■□□□□ 0.59
PCNX4-203ENST00000406854 WIZO95785 1651 aa18.73■□□□□ 0.59
PCNX4-203ENST00000406854 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
PCNX4-203ENST00000406854 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
PCNX4-203ENST00000406854 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
PCNX4-203ENST00000406854 NAP1L5Q96NT1 182 aaPredicted RBP18.72■□□□□ 0.59
PCNX4-203ENST00000406854 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
PCNX4-203ENST00000406854 MORC1Q86VD1 984 aa18.7■□□□□ 0.58
PCNX4-203ENST00000406854 NUP155O75694 1391 aa18.69■□□□□ 0.58
PCNX4-203ENST00000406854 DNTTIP2Q5QJE6 756 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms