RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
RTN1-203ENST00000395090 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
RTN1-203ENST00000395090 PLCD3Q8N3E9 789 aa19.12■□□□□ 0.65
RTN1-203ENST00000395090 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
RTN1-203ENST00000395090 NESP48681 1621 aa19.1■□□□□ 0.65
RTN1-203ENST00000395090 KLHL34Q8N239 644 aa19.09■□□□□ 0.65
RTN1-203ENST00000395090 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
RTN1-203ENST00000395090 ABCC8Q09428 1581 aa19.08■□□□□ 0.65
RTN1-203ENST00000395090 MIER1Q8N108 512 aa19.07■□□□□ 0.64
RTN1-203ENST00000395090 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
RTN1-203ENST00000395090 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.64
RTN1-203ENST00000395090 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
RTN1-203ENST00000395090 SPDYE1Q8NFV5 336 aaPredicted RBP19■□□□□ 0.63
RTN1-203ENST00000395090 SPOCK2Q92563 424 aa18.99■□□□□ 0.63
RTN1-203ENST00000395090 PLEKHG5O94827 1062 aa18.96■□□□□ 0.63
RTN1-203ENST00000395090 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
RTN1-203ENST00000395090 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
RTN1-203ENST00000395090 CUX1P39880 1505 aa18.91■□□□□ 0.62
RTN1-203ENST00000395090 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
RTN1-203ENST00000395090 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
RTN1-203ENST00000395090 ZBTB47Q9UFB7 747 aaPredicted RBP18.89■□□□□ 0.61
RTN1-203ENST00000395090 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
RTN1-203ENST00000395090 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
RTN1-203ENST00000395090 PKD2Q13563 968 aa18.85■□□□□ 0.61
RTN1-203ENST00000395090 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.61
RTN1-203ENST00000395090 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
RTN1-203ENST00000395090 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
RTN1-203ENST00000395090 PRR29P0C7W0 189 aa18.8■□□□□ 0.6
RTN1-203ENST00000395090 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
RTN1-203ENST00000395090 SOGA1O94964 1423 aa18.74■□□□□ 0.59
RTN1-203ENST00000395090 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
RTN1-203ENST00000395090 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
RTN1-203ENST00000395090 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
RTN1-203ENST00000395090 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
RTN1-203ENST00000395090 PITPNM1O00562 1244 aa18.71■□□□□ 0.58
RTN1-203ENST00000395090 EEA1Q15075 1411 aa18.7■□□□□ 0.58
RTN1-203ENST00000395090 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
RTN1-203ENST00000395090 FAM9AQ8IZU1 332 aaPredicted RBP18.68■□□□□ 0.58
RTN1-203ENST00000395090 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
RTN1-203ENST00000395090 WDR62O43379 1518 aa18.66■□□□□ 0.58
RTN1-203ENST00000395090 ECM2O94769 699 aaPredicted RBP18.66■□□□□ 0.58
RTN1-203ENST00000395090 CREBZFQ9NS37 354 aa18.65■□□□□ 0.58
RTN1-203ENST00000395090 CIZ1Q9ULV3 898 aaPredicted RBP18.61■□□□□ 0.57
RTN1-203ENST00000395090 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
RTN1-203ENST00000395090 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
RTN1-203ENST00000395090 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
RTN1-203ENST00000395090 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
RTN1-203ENST00000395090 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
RTN1-203ENST00000395090 CUX2O14529 1486 aa18.57■□□□□ 0.56
RTN1-203ENST00000395090 TARBP1Q13395 1621 aaKnown RBP18.53■□□□□ 0.56
RTN1-203ENST00000395090 MNX1P50219 401 aaPredicted RBP18.52■□□□□ 0.56
RTN1-203ENST00000395090 NUBP1P53384 320 aa18.52■□□□□ 0.55
RTN1-203ENST00000395090 IGF1RP08069 1367 aa18.51■□□□□ 0.55
RTN1-203ENST00000395090 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
RTN1-203ENST00000395090 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
RTN1-203ENST00000395090 GSE1Q14687 1217 aa18.48■□□□□ 0.55
RTN1-203ENST00000395090 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
RTN1-203ENST00000395090 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
RTN1-203ENST00000395090 RGL2O15211 777 aa18.45■□□□□ 0.54
RTN1-203ENST00000395090 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
RTN1-203ENST00000395090 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
RTN1-203ENST00000395090 KIF21BO75037 1637 aa18.41■□□□□ 0.54
RTN1-203ENST00000395090 DCAF8Q5TAQ9 597 aa18.41■□□□□ 0.54
RTN1-203ENST00000395090 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
RTN1-203ENST00000395090 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
RTN1-203ENST00000395090 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.53
RTN1-203ENST00000395090 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
RTN1-203ENST00000395090 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
RTN1-203ENST00000395090 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
RTN1-203ENST00000395090 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
RTN1-203ENST00000395090 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
RTN1-203ENST00000395090 CHADLQ6NUI6 762 aa18.35■□□□□ 0.53
RTN1-203ENST00000395090 TNIKQ9UKE5 1360 aa18.34■□□□□ 0.53
RTN1-203ENST00000395090 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
RTN1-203ENST00000395090 GRIN2BQ13224 1484 aa18.32■□□□□ 0.52
RTN1-203ENST00000395090 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
RTN1-203ENST00000395090 PLCB2Q00722 1185 aa18.31■□□□□ 0.52
RTN1-203ENST00000395090 CUL7Q14999 1698 aa18.29■□□□□ 0.52
RTN1-203ENST00000395090 EIF4G3O43432 1585 aaKnown RBP18.27■□□□□ 0.51
RTN1-203ENST00000395090 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
RTN1-203ENST00000395090 FARP1Q9Y4F1 1045 aaPredicted RBP18.25■□□□□ 0.51
RTN1-203ENST00000395090 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
RTN1-203ENST00000395090 FXR2P51116 673 aaKnown RBP eCLIP18.24■□□□□ 0.51
RTN1-203ENST00000395090 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
RTN1-203ENST00000395090 CHRDL2Q6WN34 429 aa18.23■□□□□ 0.51
RTN1-203ENST00000395090 BBXQ8WY36 941 aaPredicted RBP18.21■□□□□ 0.51
RTN1-203ENST00000395090 RNF25Q96BH1 459 aaPredicted RBP18.2■□□□□ 0.5
RTN1-203ENST00000395090 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
RTN1-203ENST00000395090 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
RTN1-203ENST00000395090 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
RTN1-203ENST00000395090 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
RTN1-203ENST00000395090 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
RTN1-203ENST00000395090 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
RTN1-203ENST00000395090 CHRM1P11229 460 aaPredicted RBP18.16■□□□□ 0.5
RTN1-203ENST00000395090 RIOK3O14730 519 aaKnown RBP18.13■□□□□ 0.49
RTN1-203ENST00000395090 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
RTN1-203ENST00000395090 PIP4P2Q8N4L2 257 aa18.11■□□□□ 0.49
RTN1-203ENST00000395090 TAOK2Q9UL54 1235 aa18.11■□□□□ 0.49
RTN1-203ENST00000395090 PYGBP11216 843 aa18.09■□□□□ 0.49
RTN1-203ENST00000395090 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms