RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 SALL2Q9Y467 1007 aaPredicted RBP22.84■■□□□ 1.25
SIN3A-203ENST00000394949 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
SIN3A-203ENST00000394949 MTUS2Q5JR59 1369 aa22.84■■□□□ 1.25
SIN3A-203ENST00000394949 PPP4R2Q9NY27 417 aa22.83■■□□□ 1.24
SIN3A-203ENST00000394949 BECN1Q14457 450 aa22.82■■□□□ 1.24
SIN3A-203ENST00000394949 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.24
SIN3A-203ENST00000394949 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
SIN3A-203ENST00000394949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.77■■□□□ 1.246e-7■■□□□ 12.5
SIN3A-203ENST00000394949 HIRIP3Q9BW71 556 aaPredicted RBP22.77■■□□□ 1.24
SIN3A-203ENST00000394949 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
SIN3A-203ENST00000394949 NOP58Q9Y2X3 529 aaKnown RBP22.75■■□□□ 1.23
SIN3A-203ENST00000394949 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
SIN3A-203ENST00000394949 ARXQ96QS3 562 aa22.68■■□□□ 1.22
SIN3A-203ENST00000394949 TRIM44Q96DX7 344 aaPredicted RBP22.68■■□□□ 1.22
SIN3A-203ENST00000394949 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
SIN3A-203ENST00000394949 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
SIN3A-203ENST00000394949 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
SIN3A-203ENST00000394949 CCER2I3L3R5 266 aa22.62■■□□□ 1.21
SIN3A-203ENST00000394949 TIMELESSQ9UNS1 1208 aa22.62■■□□□ 1.21
SIN3A-203ENST00000394949 RBM19Q9Y4C8 960 aaKnown RBP22.6■■□□□ 1.21
SIN3A-203ENST00000394949 GOLGA6L22H0YM25 854 aa22.59■■□□□ 1.21
SIN3A-203ENST00000394949 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
SIN3A-203ENST00000394949 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
SIN3A-203ENST00000394949 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
SIN3A-203ENST00000394949 DEKP35659 375 aaKnown RBP22.53■■□□□ 1.2
SIN3A-203ENST00000394949 RRP7BPQ9NSQ0 103 aa22.53■■□□□ 1.2
SIN3A-203ENST00000394949 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
SIN3A-203ENST00000394949 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
SIN3A-203ENST00000394949 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
SIN3A-203ENST00000394949 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
SIN3A-203ENST00000394949 NACADO15069 1562 aa22.46■■□□□ 1.19
SIN3A-203ENST00000394949 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
SIN3A-203ENST00000394949 B4GALNT3Q6L9W6 998 aa22.44■■□□□ 1.18
SIN3A-203ENST00000394949 TSHZ2Q9NRE2 1034 aa22.44■■□□□ 1.18
SIN3A-203ENST00000394949 NCLP19338 710 aaKnown RBP22.44■■□□□ 1.18
SIN3A-203ENST00000394949 BAZ1BQ9UIG0 1483 aaKnown RBP22.43■■□□□ 1.18
SIN3A-203ENST00000394949 CCNB3Q8WWL7 1395 aa22.43■■□□□ 1.18
SIN3A-203ENST00000394949 RTN4Q9NQC3 1192 aaKnown RBP22.41■■□□□ 1.18
SIN3A-203ENST00000394949 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
SIN3A-203ENST00000394949 CFDP1Q9UEE9 299 aaPredicted RBP22.4■■□□□ 1.18
SIN3A-203ENST00000394949 NAP1L5Q96NT1 182 aaPredicted RBP22.4■■□□□ 1.18
SIN3A-203ENST00000394949 CDCA8Q53HL2 280 aa22.4■■□□□ 1.18
SIN3A-203ENST00000394949 PPP1R15AO75807 674 aaPredicted RBP22.35■■□□□ 1.17
SIN3A-203ENST00000394949 L1TD1Q5T7N2 865 aaKnown RBP22.34■■□□□ 1.17
SIN3A-203ENST00000394949 KNSTRNQ9Y448 316 aa22.32■■□□□ 1.16
SIN3A-203ENST00000394949 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
SIN3A-203ENST00000394949 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
SIN3A-203ENST00000394949 PTMAP06454 111 aaKnown RBP22.3■■□□□ 1.16
SIN3A-203ENST00000394949 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
SIN3A-203ENST00000394949 CFAP53Q96M91 514 aa22.29■■□□□ 1.16
SIN3A-203ENST00000394949 RGS3P49796 1198 aa22.27■■□□□ 1.16
SIN3A-203ENST00000394949 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
SIN3A-203ENST00000394949 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
SIN3A-203ENST00000394949 CASC1Q6TDU7 716 aa22.23■■□□□ 1.15
SIN3A-203ENST00000394949 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
SIN3A-203ENST00000394949 MS4A1P11836 297 aa22.22■■□□□ 1.15
SIN3A-203ENST00000394949 DNTTIP2Q5QJE6 756 aaKnown RBP22.22■■□□□ 1.15
SIN3A-203ENST00000394949 TCERG1O14776 1098 aaKnown RBP22.21■■□□□ 1.15
SIN3A-203ENST00000394949 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.15
SIN3A-203ENST00000394949 CHMP4BQ9H444 224 aaKnown RBP22.19■■□□□ 1.14
SIN3A-203ENST00000394949 SENP3-EIF4A1A0A087X0R7 540 aa22.16■■□□□ 1.14
SIN3A-203ENST00000394949 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
SIN3A-203ENST00000394949 IPO9Q96P70 1041 aaKnown RBP22.14■■□□□ 1.14
SIN3A-203ENST00000394949 SOGA1O94964 1423 aa22.14■■□□□ 1.14
SIN3A-203ENST00000394949 HSP90AB1P08238 724 aaKnown RBP22.12■■□□□ 1.13
SIN3A-203ENST00000394949 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
SIN3A-203ENST00000394949 HSCBQ8IWL3 235 aa22.11■■□□□ 1.13
SIN3A-203ENST00000394949 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
SIN3A-203ENST00000394949 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
SIN3A-203ENST00000394949 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.13
SIN3A-203ENST00000394949 ZBTB7CA1YPR0 619 aa22.08■■□□□ 1.12
SIN3A-203ENST00000394949 FRAT1Q92837 279 aaPredicted RBP22.07■■□□□ 1.12
SIN3A-203ENST00000394949 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
SIN3A-203ENST00000394949 MSNP26038 577 aaKnown RBP22.06■■□□□ 1.12
SIN3A-203ENST00000394949 A0A0G2JS52 829 aa22.06■■□□□ 1.12
SIN3A-203ENST00000394949 NUDCQ9Y266 331 aa22.06■■□□□ 1.12
SIN3A-203ENST00000394949 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
SIN3A-203ENST00000394949 PTMSP20962 102 aa22.05■■□□□ 1.12
SIN3A-203ENST00000394949 RAB3GAP2Q9H2M9 1393 aa22.04■■□□□ 1.12
SIN3A-203ENST00000394949 MAPK8IP3Q9UPT6 1336 aa22.04■■□□□ 1.12
SIN3A-203ENST00000394949 ZRSR1Q15695 479 aaKnown RBP22.04■■□□□ 1.12
SIN3A-203ENST00000394949 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
SIN3A-203ENST00000394949 TMF1P82094 1093 aa22.02■■□□□ 1.12
SIN3A-203ENST00000394949 CFAP44Q96MT7 982 aa22.02■■□□□ 1.12
SIN3A-203ENST00000394949 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.11
SIN3A-203ENST00000394949 POGKQ9P215 609 aa22.02■■□□□ 1.11
SIN3A-203ENST00000394949 CC2D1BQ5T0F9 858 aaKnown RBP22.01■■□□□ 1.11
SIN3A-203ENST00000394949 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
SIN3A-203ENST00000394949 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
SIN3A-203ENST00000394949 NEUROD2Q15784 382 aa21.99■■□□□ 1.11
SIN3A-203ENST00000394949 PLEKHG5O94827 1062 aa21.99■■□□□ 1.11
SIN3A-203ENST00000394949 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
SIN3A-203ENST00000394949 CUX2O14529 1486 aa21.99■■□□□ 1.11
SIN3A-203ENST00000394949 RALBP1Q15311 655 aa21.98■■□□□ 1.11
SIN3A-203ENST00000394949 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
SIN3A-203ENST00000394949 KTN1Q86UP2 1357 aaKnown RBP21.97■■□□□ 1.11
SIN3A-203ENST00000394949 HAP1P54257 671 aaPredicted RBP21.96■■□□□ 1.11
SIN3A-203ENST00000394949 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
SIN3A-203ENST00000394949 GBP4Q96PP9 640 aa21.95■■□□□ 1.1
SIN3A-203ENST00000394949 GOLGA6L6A8MZA4 724 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms