RNA–Protein interactions for RNA: ENST00000392924.1

SYCP3-202, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-202ENST00000392924 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
SYCP3-202ENST00000392924 CCDC61Q9Y6R9 512 aa13.77□□□□□ -0.21
SYCP3-202ENST00000392924 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
SYCP3-202ENST00000392924 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
SYCP3-202ENST00000392924 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
SYCP3-202ENST00000392924 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
SYCP3-202ENST00000392924 GSE1Q14687 1217 aa13.66□□□□□ -0.22
SYCP3-202ENST00000392924 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
SYCP3-202ENST00000392924 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
SYCP3-202ENST00000392924 MAP3K13O43283 966 aa13.6□□□□□ -0.23
SYCP3-202ENST00000392924 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
SYCP3-202ENST00000392924 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
SYCP3-202ENST00000392924 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
SYCP3-202ENST00000392924 PYGBP11216 843 aa13.53□□□□□ -0.24
SYCP3-202ENST00000392924 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
SYCP3-202ENST00000392924 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
SYCP3-202ENST00000392924 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
SYCP3-202ENST00000392924 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
SYCP3-202ENST00000392924 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
SYCP3-202ENST00000392924 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
SYCP3-202ENST00000392924 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SYCP3-202ENST00000392924 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
SYCP3-202ENST00000392924 TIE1P35590 1138 aa13.39□□□□□ -0.27
SYCP3-202ENST00000392924 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
SYCP3-202ENST00000392924 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
SYCP3-202ENST00000392924 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
SYCP3-202ENST00000392924 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
SYCP3-202ENST00000392924 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
SYCP3-202ENST00000392924 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
SYCP3-202ENST00000392924 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
SYCP3-202ENST00000392924 TMEM106CQ9BVX2 250 aa13.28□□□□□ -0.28
SYCP3-202ENST00000392924 PKD2Q13563 968 aa13.25□□□□□ -0.29
SYCP3-202ENST00000392924 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
SYCP3-202ENST00000392924 C7P10643 843 aa13.24□□□□□ -0.29
SYCP3-202ENST00000392924 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
SYCP3-202ENST00000392924 PSEN1P49768 467 aa13.22□□□□□ -0.29
SYCP3-202ENST00000392924 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
SYCP3-202ENST00000392924 LHX8Q68G74 356 aa13.21□□□□□ -0.29
SYCP3-202ENST00000392924 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
SYCP3-202ENST00000392924 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
SYCP3-202ENST00000392924 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
SYCP3-202ENST00000392924 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
SYCP3-202ENST00000392924 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
SYCP3-202ENST00000392924 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
SYCP3-202ENST00000392924 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
SYCP3-202ENST00000392924 IER5LQ5T953 404 aa13.14□□□□□ -0.31
SYCP3-202ENST00000392924 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
SYCP3-202ENST00000392924 SEC24BO95487 1268 aa13.13□□□□□ -0.31
SYCP3-202ENST00000392924 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
SYCP3-202ENST00000392924 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
SYCP3-202ENST00000392924 RGL2O15211 777 aa13.08□□□□□ -0.32
SYCP3-202ENST00000392924 IRX5P78411 483 aaPredicted RBP13.07□□□□□ -0.32
SYCP3-202ENST00000392924 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
SYCP3-202ENST00000392924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
SYCP3-202ENST00000392924 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
SYCP3-202ENST00000392924 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
SYCP3-202ENST00000392924 PLCG2P16885 1265 aa13.03□□□□□ -0.32
SYCP3-202ENST00000392924 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
SYCP3-202ENST00000392924 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
SYCP3-202ENST00000392924 STK25O00506 426 aa12.98□□□□□ -0.33
SYCP3-202ENST00000392924 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
SYCP3-202ENST00000392924 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
SYCP3-202ENST00000392924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
SYCP3-202ENST00000392924 ILDR1Q86SU0 546 aaPredicted RBP12.96□□□□□ -0.33
SYCP3-202ENST00000392924 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
SYCP3-202ENST00000392924 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
SYCP3-202ENST00000392924 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
SYCP3-202ENST00000392924 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
SYCP3-202ENST00000392924 MAMSTRQ6ZN01 415 aa12.93□□□□□ -0.34
SYCP3-202ENST00000392924 SOX12O15370 315 aa12.9□□□□□ -0.34
SYCP3-202ENST00000392924 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
SYCP3-202ENST00000392924 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
SYCP3-202ENST00000392924 G3V3G9 751 aa12.86□□□□□ -0.35
SYCP3-202ENST00000392924 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
SYCP3-202ENST00000392924 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
SYCP3-202ENST00000392924 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
SYCP3-202ENST00000392924 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
SYCP3-202ENST00000392924 NLRP6P59044 892 aa12.81□□□□□ -0.36
SYCP3-202ENST00000392924 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
SYCP3-202ENST00000392924 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
SYCP3-202ENST00000392924 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
SYCP3-202ENST00000392924 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
SYCP3-202ENST00000392924 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
SYCP3-202ENST00000392924 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
SYCP3-202ENST00000392924 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
SYCP3-202ENST00000392924 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
SYCP3-202ENST00000392924 TMEM121BQ9BXQ6 578 aaPredicted RBP12.71□□□□□ -0.37
SYCP3-202ENST00000392924 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
SYCP3-202ENST00000392924 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
SYCP3-202ENST00000392924 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
SYCP3-202ENST00000392924 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
SYCP3-202ENST00000392924 PPP1R37O75864 691 aa12.6□□□□□ -0.39
SYCP3-202ENST00000392924 FAM163AQ96GL9 167 aaPredicted RBP12.56□□□□□ -0.4
SYCP3-202ENST00000392924 SNPHO15079 494 aa12.55□□□□□ -0.4
SYCP3-202ENST00000392924 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
SYCP3-202ENST00000392924 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
SYCP3-202ENST00000392924 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
SYCP3-202ENST00000392924 LCE2DQ5TA82 110 aaPredicted RBP12.52□□□□□ -0.41
SYCP3-202ENST00000392924 GTPBP6O43824 516 aaPredicted RBP12.51□□□□□ -0.41
SYCP3-202ENST00000392924 ST18O60284 1047 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms