RNA–Protein interactions for RNA: ENST00000390528.1

TRAJ9-201, Transcript of T cell receptor alpha joining 9, humanhuman

APPRIS P1 BASIC

Gene TRAJ9, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ9-201ENST00000390528 SNPHO15079 494 aa3.63□□□□□ -1.83
TRAJ9-201ENST00000390528 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
TRAJ9-201ENST00000390528 PAK3O75914 559 aaPredicted RBP3.62□□□□□ -1.83
TRAJ9-201ENST00000390528 PHF12Q96QT6 1004 aa3.62□□□□□ -1.83
TRAJ9-201ENST00000390528 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
TRAJ9-201ENST00000390528 EMP3P54852 163 aa3.6□□□□□ -1.83
TRAJ9-201ENST00000390528 MYT1LQ9UL68 1186 aa3.6□□□□□ -1.83
TRAJ9-201ENST00000390528 ATN1P54259 1190 aaPredicted RBP3.59□□□□□ -1.83
TRAJ9-201ENST00000390528 HS3ST6Q96QI5 342 aa3.59□□□□□ -1.83
TRAJ9-201ENST00000390528 SEC24BO95487 1268 aa3.57□□□□□ -1.84
TRAJ9-201ENST00000390528 PLA2G2EQ9NZK7 142 aa3.57□□□□□ -1.84
TRAJ9-201ENST00000390528 ZNF692Q9BU19 519 aaPredicted RBP3.56□□□□□ -1.84
TRAJ9-201ENST00000390528 IRX2Q9BZI1 471 aaPredicted RBP3.56□□□□□ -1.84
TRAJ9-201ENST00000390528 SSUH2Q9Y2M2 353 aa3.56□□□□□ -1.84
TRAJ9-201ENST00000390528 FAM205CA6NFA0 338 aa3.55□□□□□ -1.84
TRAJ9-201ENST00000390528 MS4A3Q96HJ5 214 aa3.55□□□□□ -1.84
TRAJ9-201ENST00000390528 POTEB3A0JP26 581 aa3.54□□□□□ -1.84
TRAJ9-201ENST00000390528 MYCNP04198 464 aaPredicted RBP3.54□□□□□ -1.84
TRAJ9-201ENST00000390528 POTEBQ6S5H4 581 aa3.54□□□□□ -1.84
TRAJ9-201ENST00000390528 COLQQ9Y215 455 aaPredicted RBP3.52□□□□□ -1.85
TRAJ9-201ENST00000390528 PTGER2P43116 358 aa3.49□□□□□ -1.85
TRAJ9-201ENST00000390528 FBLN2P98095 1184 aa3.49□□□□□ -1.85
TRAJ9-201ENST00000390528 RGS20O76081 388 aa3.46□□□□□ -1.86
TRAJ9-201ENST00000390528 PABPN1Q86U42 306 aaKnown RBP eCLIP3.45□□□□□ -1.86
TRAJ9-201ENST00000390528 BMP2KQ9NSY1 1161 aaPredicted RBP3.45□□□□□ -1.86
TRAJ9-201ENST00000390528 IER5LQ5T953 404 aa3.43□□□□□ -1.86
TRAJ9-201ENST00000390528 Q6ZNB5 142 aa3.43□□□□□ -1.86
TRAJ9-201ENST00000390528 TIE1P35590 1138 aa3.41□□□□□ -1.86
TRAJ9-201ENST00000390528 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.41□□□□□ -1.86
TRAJ9-201ENST00000390528 CREBZFQ9NS37 354 aa3.4□□□□□ -1.87
TRAJ9-201ENST00000390528 NPM1P06748 294 aaKnown RBP eCLIP3.39□□□□□ -1.87
TRAJ9-201ENST00000390528 HCSTQ9UBK5 93 aa3.38□□□□□ -1.87
TRAJ9-201ENST00000390528 PLCG2P16885 1265 aa3.36□□□□□ -1.87
TRAJ9-201ENST00000390528 ERBB3P21860 1342 aa3.35□□□□□ -1.87
TRAJ9-201ENST00000390528 TTLL13PA6NNM8 815 aa3.34□□□□□ -1.87
TRAJ9-201ENST00000390528 TRPC6Q9Y210 931 aa3.34□□□□□ -1.87
TRAJ9-201ENST00000390528 TRIM35Q9UPQ4 493 aa3.33□□□□□ -1.88
TRAJ9-201ENST00000390528 ANKRD13DQ6ZTN6 518 aa3.3□□□□□ -1.88
TRAJ9-201ENST00000390528 KIF12Q96FN5 646 aa3.3□□□□□ -1.88
TRAJ9-201ENST00000390528 TRAF7Q6Q0C0 670 aa3.29□□□□□ -1.88
TRAJ9-201ENST00000390528 ZNF775Q96BV0 537 aaPredicted RBP3.29□□□□□ -1.88
TRAJ9-201ENST00000390528 SUZ12Q15022 739 aaKnown RBP3.28□□□□□ -1.88
TRAJ9-201ENST00000390528 ZNF687Q8N1G0 1237 aa3.28□□□□□ -1.88
TRAJ9-201ENST00000390528 HOXB1P14653 301 aaPredicted RBP3.27□□□□□ -1.89
TRAJ9-201ENST00000390528 VARS2Q5ST30 1063 aaKnown RBP3.27□□□□□ -1.89
TRAJ9-201ENST00000390528 MKRN4PQ13434 485 aaPredicted RBP3.26□□□□□ -1.89
TRAJ9-201ENST00000390528 ZNF787Q6DD87 383 aa3.26□□□□□ -1.89
TRAJ9-201ENST00000390528 IRX5P78411 483 aaPredicted RBP3.25□□□□□ -1.89
TRAJ9-201ENST00000390528 LAPTM4AQ15012 233 aa3.25□□□□□ -1.89
TRAJ9-201ENST00000390528 C3orf67Q6ZVT6 689 aa3.25□□□□□ -1.89
TRAJ9-201ENST00000390528 CCDC61Q9Y6R9 512 aa3.25□□□□□ -1.89
TRAJ9-201ENST00000390528 ZNF710Q8N1W2 664 aa3.24□□□□□ -1.89
TRAJ9-201ENST00000390528 TSPYL2Q9H2G4 693 aaPredicted RBP3.24□□□□□ -1.89
TRAJ9-201ENST00000390528 OCEL1Q9H607 264 aa3.24□□□□□ -1.89
TRAJ9-201ENST00000390528 STAG3Q9UJ98 1225 aa3.24□□□□□ -1.89
TRAJ9-201ENST00000390528 MAP3K13O43283 966 aa3.23□□□□□ -1.89
TRAJ9-201ENST00000390528 IFFO2Q5TF58 517 aa3.23□□□□□ -1.89
TRAJ9-201ENST00000390528 LCE2BO14633 110 aa3.22□□□□□ -1.89
TRAJ9-201ENST00000390528 STK17AQ9UEE5 414 aa3.22□□□□□ -1.89
TRAJ9-201ENST00000390528 A0A0G2JS52 829 aa3.21□□□□□ -1.9
TRAJ9-201ENST00000390528 MNX1P50219 401 aaPredicted RBP3.21□□□□□ -1.9
TRAJ9-201ENST00000390528 LSM11P83369 360 aaKnown RBP eCLIP3.2□□□□□ -1.9
TRAJ9-201ENST00000390528 HOXB3P14651 431 aaPredicted RBP3.18□□□□□ -1.9
TRAJ9-201ENST00000390528 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
TRAJ9-201ENST00000390528 DOK7Q18PE1 504 aa3.16□□□□□ -1.9
TRAJ9-201ENST00000390528 L3MBTL3Q96JM7 780 aaPredicted RBP3.16□□□□□ -1.9
TRAJ9-201ENST00000390528 RIMBP2O15034 1052 aa3.15□□□□□ -1.91
TRAJ9-201ENST00000390528 SGIP1Q9BQI5 828 aa3.14□□□□□ -1.91
TRAJ9-201ENST00000390528 TMEM106CQ9BVX2 250 aa3.14□□□□□ -1.91
TRAJ9-201ENST00000390528 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
TRAJ9-201ENST00000390528 GFRA3O60609 400 aa3.13□□□□□ -1.91
TRAJ9-201ENST00000390528 KRTAP1-3Q8IUG1 177 aa3.13□□□□□ -1.91
TRAJ9-201ENST00000390528 TREML4Q6UXN2 200 aa3.12□□□□□ -1.91
TRAJ9-201ENST00000390528 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
TRAJ9-201ENST00000390528 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
TRAJ9-201ENST00000390528 ANO8Q9HCE9 1232 aaPredicted RBP3.1□□□□□ -1.91
TRAJ9-201ENST00000390528 PCDHB13Q9Y5F0 798 aa3.1□□□□□ -1.91
TRAJ9-201ENST00000390528 INSM1Q01101 510 aaPredicted RBP3.09□□□□□ -1.91
TRAJ9-201ENST00000390528 LCE2AQ5TA79 106 aaPredicted RBP3.08□□□□□ -1.92
TRAJ9-201ENST00000390528 ZSWIM6Q9HCJ5 1215 aa3.08□□□□□ -1.92
TRAJ9-201ENST00000390528 PBX2P40425 430 aa3.07□□□□□ -1.92
TRAJ9-201ENST00000390528 NRG2O14511 850 aaPredicted RBP3.06□□□□□ -1.92
TRAJ9-201ENST00000390528 ATXN8OSP0DMR3 200 aa3.06□□□□□ -1.92
TRAJ9-201ENST00000390528 KCTD12Q96CX2 325 aaKnown RBP3.06□□□□□ -1.92
TRAJ9-201ENST00000390528 PSMG3-AS1Q96PY0 264 aa3.06□□□□□ -1.92
TRAJ9-201ENST00000390528 XP32Q5T750 250 aa3.05□□□□□ -1.92
TRAJ9-201ENST00000390528 PDCD7Q8N8D1 485 aaKnown RBP3.05□□□□□ -1.92
TRAJ9-201ENST00000390528 ADGRD1Q6QNK2 874 aa3.03□□□□□ -1.92
TRAJ9-201ENST00000390528 IFNL1Q8IU54 200 aa3.03□□□□□ -1.92
TRAJ9-201ENST00000390528 FOXD4L1Q9NU39 408 aa3.03□□□□□ -1.92
TRAJ9-201ENST00000390528 FAM181BA6NEQ2 426 aa3.02□□□□□ -1.93
TRAJ9-201ENST00000390528 BTBD11A6QL63 1104 aa3.02□□□□□ -1.93
TRAJ9-201ENST00000390528 PTPN5P54829 565 aa3.02□□□□□ -1.93
TRAJ9-201ENST00000390528 GPR153Q6NV75 609 aa3.02□□□□□ -1.93
TRAJ9-201ENST00000390528 ZNF316A6NFI3 1004 aaPredicted RBP3.01□□□□□ -1.93
TRAJ9-201ENST00000390528 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
TRAJ9-201ENST00000390528 STAC3Q96MF2 364 aa3.01□□□□□ -1.93
TRAJ9-201ENST00000390528 KRTAP4-8A0A0G2JLE6 195 aa3□□□□□ -1.93
TRAJ9-201ENST00000390528 WIPF1O43516 503 aa3□□□□□ -1.93
TRAJ9-201ENST00000390528 G3V3G9 751 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms