RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 RAD21O60216 631 aa5.09□□□□□ -1.59
TRAJ17-201ENST00000390520 NEUROD2Q15784 382 aa5.07□□□□□ -1.6
TRAJ17-201ENST00000390520 MTMR7Q9Y216 660 aa5.06□□□□□ -1.6
TRAJ17-201ENST00000390520 ECM2O94769 699 aaPredicted RBP5.05□□□□□ -1.6
TRAJ17-201ENST00000390520 POLR3GLQ9BT43 218 aa5.05□□□□□ -1.6
TRAJ17-201ENST00000390520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.04□□□□□ -1.6
TRAJ17-201ENST00000390520 TRAIPQ9BWF2 469 aa5.04□□□□□ -1.6
TRAJ17-201ENST00000390520 RSPH4AQ5TD94 716 aa5.03□□□□□ -1.6
TRAJ17-201ENST00000390520 APBB1O00213 710 aa5.02□□□□□ -1.61
TRAJ17-201ENST00000390520 RBM25P49756 843 aaKnown RBP5.02□□□□□ -1.61
TRAJ17-201ENST00000390520 LMOD2Q6P5Q4 547 aa5.02□□□□□ -1.61
TRAJ17-201ENST00000390520 ZNF428Q96B54 188 aa5.02□□□□□ -1.61
TRAJ17-201ENST00000390520 ZNF692Q9BU19 519 aaPredicted RBP5.02□□□□□ -1.61
TRAJ17-201ENST00000390520 RGL2O15211 777 aa5.01□□□□□ -1.61
TRAJ17-201ENST00000390520 FAM177A1Q8N128 213 aaPredicted RBP5.01□□□□□ -1.61
TRAJ17-201ENST00000390520 PKNOX2Q96KN3 472 aa5.01□□□□□ -1.61
TRAJ17-201ENST00000390520 ARID3CA6NKF2 412 aa5□□□□□ -1.61
TRAJ17-201ENST00000390520 FGD1P98174 961 aa5□□□□□ -1.61
TRAJ17-201ENST00000390520 TICAM2Q86XR7 235 aa5□□□□□ -1.61
TRAJ17-201ENST00000390520 PROM2Q8N271 834 aa5□□□□□ -1.61
TRAJ17-201ENST00000390520 E9PSI1 815 aa4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 CLSTN1O94985 981 aa4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 MYCNP04198 464 aaPredicted RBP4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 ZNF326Q5BKZ1 582 aaKnown RBP4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 TMCO4Q5TGY1 634 aa4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 FOXD4L5Q5VV16 416 aaPredicted RBP4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 CC2D2BQ6DHV5 1058 aa4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 FOXD4L4Q8WXT5 416 aaPredicted RBP4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 BCL11BQ9C0K0 894 aaPredicted RBP4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.99□□□□□ -1.61
TRAJ17-201ENST00000390520 SLC4A2P04920 1241 aa4.98□□□□□ -1.61
TRAJ17-201ENST00000390520 MFAP1P55081 439 aaKnown RBP4.98□□□□□ -1.61
TRAJ17-201ENST00000390520 CHGAP10645 457 aaKnown RBP4.97□□□□□ -1.61
TRAJ17-201ENST00000390520 PSMD1Q99460 953 aa4.96□□□□□ -1.62
TRAJ17-201ENST00000390520 USP35Q9P2H5 1018 aa4.96□□□□□ -1.62
TRAJ17-201ENST00000390520 CERS3Q8IU89 383 aa4.95□□□□□ -1.62
TRAJ17-201ENST00000390520 BRPF3Q9ULD4 1205 aa4.95□□□□□ -1.62
TRAJ17-201ENST00000390520 CCDC125Q86Z20 511 aa4.94□□□□□ -1.62
TRAJ17-201ENST00000390520 CCDC82Q8N4S0 544 aa4.94□□□□□ -1.62
TRAJ17-201ENST00000390520 ZC3H15Q8WU90 426 aaKnown RBP4.94□□□□□ -1.62
TRAJ17-201ENST00000390520 ZNF592Q92610 1267 aa4.94□□□□□ -1.62
TRAJ17-201ENST00000390520 SLC24A3Q9HC58 644 aa4.94□□□□□ -1.62
TRAJ17-201ENST00000390520 CWC22Q9HCG8 908 aaKnown RBP4.94□□□□□ -1.62
TRAJ17-201ENST00000390520 AEBP1Q8IUX7 1158 aa4.93□□□□□ -1.62
TRAJ17-201ENST00000390520 P3H3Q8IVL6 736 aa4.93□□□□□ -1.62
TRAJ17-201ENST00000390520 ZFP91Q96JP5 570 aaPredicted RBP4.93□□□□□ -1.62
TRAJ17-201ENST00000390520 PPM1GO15355 546 aaPredicted RBP4.92□□□□□ -1.62
TRAJ17-201ENST00000390520 MAPK8IP2Q13387 824 aaPredicted RBP4.92□□□□□ -1.62
TRAJ17-201ENST00000390520 SPOCK2Q92563 424 aa4.92□□□□□ -1.62
TRAJ17-201ENST00000390520 GZF1Q9H116 711 aaPredicted RBP4.92□□□□□ -1.62
TRAJ17-201ENST00000390520 HS6ST3Q8IZP7 471 aa4.91□□□□□ -1.62
TRAJ17-201ENST00000390520 CANXP27824 592 aaKnown RBP4.9□□□□□ -1.63
TRAJ17-201ENST00000390520 MKRN3Q13064 507 aaKnown RBP4.9□□□□□ -1.63
TRAJ17-201ENST00000390520 ARID4BQ4LE39 1312 aaPredicted RBP4.9□□□□□ -1.63
TRAJ17-201ENST00000390520 SPDYE4A6NLX3 237 aa4.89□□□□□ -1.63
TRAJ17-201ENST00000390520 TMED8Q6PL24 325 aaPredicted RBP4.89□□□□□ -1.63
TRAJ17-201ENST00000390520 FOXD1Q16676 465 aa4.88□□□□□ -1.63
TRAJ17-201ENST00000390520 BARGINQ6ZT62 677 aa4.88□□□□□ -1.63
TRAJ17-201ENST00000390520 PIAS4Q8N2W9 510 aaPredicted RBP4.88□□□□□ -1.63
TRAJ17-201ENST00000390520 AMOTL2Q9Y2J4 779 aa4.88□□□□□ -1.63
TRAJ17-201ENST00000390520 CADPSQ9ULU8 1353 aa4.88□□□□□ -1.63
TRAJ17-201ENST00000390520 GTPBP6O43824 516 aaPredicted RBP4.87□□□□□ -1.63
TRAJ17-201ENST00000390520 PRDM16Q9HAZ2 1276 aa4.87□□□□□ -1.63
TRAJ17-201ENST00000390520 A6NJR5 290 aa4.86□□□□□ -1.63
TRAJ17-201ENST00000390520 TRAK2O60296 914 aa4.86□□□□□ -1.63
TRAJ17-201ENST00000390520 CCDC27Q2M243 656 aa4.86□□□□□ -1.63
TRAJ17-201ENST00000390520 IRX6P78412 446 aaPredicted RBP4.85□□□□□ -1.63
TRAJ17-201ENST00000390520 SETQ01105 290 aaPredicted RBP4.85□□□□□ -1.63
TRAJ17-201ENST00000390520 FLIIQ13045 1269 aa4.85□□□□□ -1.63
TRAJ17-201ENST00000390520 IL27Q8NEV9 243 aa4.85□□□□□ -1.63
TRAJ17-201ENST00000390520 NAP1L5Q96NT1 182 aaPredicted RBP4.85□□□□□ -1.63
TRAJ17-201ENST00000390520 WDR70Q9NW82 654 aa4.85□□□□□ -1.63
TRAJ17-201ENST00000390520 SCAF1Q9H7N4 1312 aaKnown RBP4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 ZNF316A6NFI3 1004 aaPredicted RBP4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 ZMYND10O75800 440 aa4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 NKX1-1Q15270 411 aaPredicted RBP4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 TEX2Q8IWB9 1127 aa4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 CCDC136Q96JN2 1154 aa4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 IGSF5Q9NSI5 407 aa4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 RNF216Q9NWF9 866 aaPredicted RBP4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 ATF5Q9Y2D1 282 aaPredicted RBP4.84□□□□□ -1.63
TRAJ17-201ENST00000390520 IRF5Q13568 498 aa4.83□□□□□ -1.64
TRAJ17-201ENST00000390520 KCNV2Q8TDN2 545 aa4.83□□□□□ -1.64
TRAJ17-201ENST00000390520 FBXW7Q969H0 707 aa4.83□□□□□ -1.64
TRAJ17-201ENST00000390520 NCLP19338 710 aaKnown RBP4.82□□□□□ -1.64
TRAJ17-201ENST00000390520 ZEB1P37275 1124 aaPredicted RBP4.82□□□□□ -1.64
TRAJ17-201ENST00000390520 GPBP1L1Q9HC44 474 aaPredicted RBP4.82□□□□□ -1.64
TRAJ17-201ENST00000390520 MAFGO15525 162 aa4.81□□□□□ -1.64
TRAJ17-201ENST00000390520 AAMPQ13685 434 aa4.81□□□□□ -1.64
TRAJ17-201ENST00000390520 RETREG2Q8NC44 543 aa4.81□□□□□ -1.64
TRAJ17-201ENST00000390520 ONECUT3O60422 494 aaPredicted RBP4.8□□□□□ -1.64
TRAJ17-201ENST00000390520 KDM4AO75164 1064 aa4.8□□□□□ -1.64
TRAJ17-201ENST00000390520 ANKRD13AQ8IZ07 590 aa4.8□□□□□ -1.64
TRAJ17-201ENST00000390520 LOC102724159A0A0B4J2E5 919 aa4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 PLEKHD1A6NEE1 506 aa4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 PATL2C9JE40 543 aaKnown RBP4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 PWP2Q15269 919 aaKnown RBP4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 SPATA32Q96LK8 384 aa4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 PLCD4Q9BRC7 762 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms