RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 CHIC2Q9UKJ5 165 aa14.72□□□□□ -0.05
RAD50-201ENST00000378823 CASC1Q6TDU7 716 aa14.72□□□□□ -0.05
RAD50-201ENST00000378823 PTMAP06454 111 aaKnown RBP14.72□□□□□ -0.05
RAD50-201ENST00000378823 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
RAD50-201ENST00000378823 EIF4G2P78344 907 aaKnown RBP eCLIP14.7□□□□□ -0.06
RAD50-201ENST00000378823 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
RAD50-201ENST00000378823 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
RAD50-201ENST00000378823 MIER1Q8N108 512 aa14.69□□□□□ -0.06
RAD50-201ENST00000378823 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
RAD50-201ENST00000378823 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
RAD50-201ENST00000378823 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
RAD50-201ENST00000378823 A0A0G2JS52 829 aa14.66□□□□□ -0.06
RAD50-201ENST00000378823 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
RAD50-201ENST00000378823 HIRIP3Q9BW71 556 aaPredicted RBP14.62□□□□□ -0.07
RAD50-201ENST00000378823 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
RAD50-201ENST00000378823 NAP1L5Q96NT1 182 aaPredicted RBP14.59□□□□□ -0.07
RAD50-201ENST00000378823 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
RAD50-201ENST00000378823 CFAP53Q96M91 514 aa14.58□□□□□ -0.08
RAD50-201ENST00000378823 GOLGA6L6A8MZA4 724 aa14.56□□□□□ -0.08
RAD50-201ENST00000378823 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
RAD50-201ENST00000378823 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
RAD50-201ENST00000378823 TPRNQ4KMQ1 711 aa14.55□□□□□ -0.08
RAD50-201ENST00000378823 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
RAD50-201ENST00000378823 ZBTB7CA1YPR0 619 aa14.55□□□□□ -0.08
RAD50-201ENST00000378823 CLIP1P30622 1438 aa14.54□□□□□ -0.08
RAD50-201ENST00000378823 NRDCO43847 1150 aa14.52□□□□□ -0.09
RAD50-201ENST00000378823 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.09
RAD50-201ENST00000378823 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.09
RAD50-201ENST00000378823 PLCB2Q00722 1185 aa14.51□□□□□ -0.09
RAD50-201ENST00000378823 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
RAD50-201ENST00000378823 CHAF1AQ13111 956 aaPredicted RBP14.5□□□□□ -0.09
RAD50-201ENST00000378823 RRP7BPQ9NSQ0 103 aa14.5□□□□□ -0.09
RAD50-201ENST00000378823 HSP90AB1P08238 724 aaKnown RBP14.5□□□□□ -0.09
RAD50-201ENST00000378823 PLEKHG5O94827 1062 aa14.5□□□□□ -0.09
RAD50-201ENST00000378823 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
RAD50-201ENST00000378823 CHMP4BQ9H444 224 aaKnown RBP14.49□□□□□ -0.09
RAD50-201ENST00000378823 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
RAD50-201ENST00000378823 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
RAD50-201ENST00000378823 FGD1P98174 961 aa14.46□□□□□ -0.09
RAD50-201ENST00000378823 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
RAD50-201ENST00000378823 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
RAD50-201ENST00000378823 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
RAD50-201ENST00000378823 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
RAD50-201ENST00000378823 MAPK8IP3Q9UPT6 1336 aa14.45□□□□□ -0.1
RAD50-201ENST00000378823 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
RAD50-201ENST00000378823 RGS3P49796 1198 aa14.44□□□□□ -0.1
RAD50-201ENST00000378823 MSNP26038 577 aaKnown RBP14.43□□□□□ -0.1
RAD50-201ENST00000378823 MS4A1P11836 297 aa14.43□□□□□ -0.1
RAD50-201ENST00000378823 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
RAD50-201ENST00000378823 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
RAD50-201ENST00000378823 KCNJ4P48050 445 aa14.43□□□□□ -0.1
RAD50-201ENST00000378823 NUDCQ9Y266 331 aa14.41□□□□□ -0.1
RAD50-201ENST00000378823 GOLGA6L4A6NEF3 574 aa14.4□□□□□ -0.1
RAD50-201ENST00000378823 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
RAD50-201ENST00000378823 OS9Q13438 667 aaPredicted RBP14.4□□□□□ -0.1
RAD50-201ENST00000378823 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
RAD50-201ENST00000378823 FRAT1Q92837 279 aaPredicted RBP14.4□□□□□ -0.1
RAD50-201ENST00000378823 PNNQ9H307 717 aaKnown RBP14.4□□□□□ -0.1
RAD50-201ENST00000378823 SENP3-EIF4A1A0A087X0R7 540 aa14.39□□□□□ -0.11
RAD50-201ENST00000378823 HSCBQ8IWL3 235 aa14.39□□□□□ -0.11
RAD50-201ENST00000378823 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
RAD50-201ENST00000378823 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
RAD50-201ENST00000378823 NAP1L2Q9ULW6 460 aaPredicted RBP14.38□□□□□ -0.11
RAD50-201ENST00000378823 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
RAD50-201ENST00000378823 NPHP1O15259 732 aa14.37□□□□□ -0.11
RAD50-201ENST00000378823 EEA1Q15075 1411 aa14.37□□□□□ -0.11
RAD50-201ENST00000378823 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
RAD50-201ENST00000378823 DRC7Q8IY82 874 aa14.36□□□□□ -0.11
RAD50-201ENST00000378823 PLEKHD1A6NEE1 506 aa14.35□□□□□ -0.11
RAD50-201ENST00000378823 MCCP23508 829 aa14.35□□□□□ -0.11
RAD50-201ENST00000378823 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
RAD50-201ENST00000378823 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
RAD50-201ENST00000378823 B4GALNT3Q6L9W6 998 aa14.33□□□□□ -0.12
RAD50-201ENST00000378823 CFDP1Q9UEE9 299 aaPredicted RBP14.3□□□□□ -0.12
RAD50-201ENST00000378823 POGKQ9P215 609 aa14.3□□□□□ -0.12
RAD50-201ENST00000378823 CC2D1BQ5T0F9 858 aaKnown RBP14.3□□□□□ -0.12
RAD50-201ENST00000378823 ARID4BQ4LE39 1312 aaPredicted RBP14.29□□□□□ -0.12
RAD50-201ENST00000378823 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
RAD50-201ENST00000378823 PTMSP20962 102 aa14.27□□□□□ -0.12
RAD50-201ENST00000378823 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.13
RAD50-201ENST00000378823 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
RAD50-201ENST00000378823 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
RAD50-201ENST00000378823 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
RAD50-201ENST00000378823 GNL2Q13823 731 aaKnown RBP14.25□□□□□ -0.13
RAD50-201ENST00000378823 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
RAD50-201ENST00000378823 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
RAD50-201ENST00000378823 KAT6BQ8WYB5 2073 aa14.24□□□□□ -0.13
RAD50-201ENST00000378823 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
RAD50-201ENST00000378823 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
RAD50-201ENST00000378823 CLSTN1O94985 981 aa14.23□□□□□ -0.13
RAD50-201ENST00000378823 TMF1P82094 1093 aa14.23□□□□□ -0.13
RAD50-201ENST00000378823 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
RAD50-201ENST00000378823 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
RAD50-201ENST00000378823 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
RAD50-201ENST00000378823 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
RAD50-201ENST00000378823 SYAP1Q96A49 352 aaPredicted RBP14.2□□□□□ -0.14
RAD50-201ENST00000378823 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
RAD50-201ENST00000378823 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
RAD50-201ENST00000378823 IPO8O15397 1037 aaKnown RBP14.17□□□□□ -0.14
RAD50-201ENST00000378823 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms