RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 CLEC11AQ9Y240 323 aa22.46■■□□□ 1.19
LST1-208ENST00000376093 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
LST1-208ENST00000376093 PIP4P2Q8N4L2 257 aa22.44■■□□□ 1.18
LST1-208ENST00000376093 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
LST1-208ENST00000376093 FKBP8Q14318 412 aa22.32■■□□□ 1.16
LST1-208ENST00000376093 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
LST1-208ENST00000376093 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
LST1-208ENST00000376093 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
LST1-208ENST00000376093 PRR29P0C7W0 189 aa22.21■■□□□ 1.15
LST1-208ENST00000376093 STAG3Q9UJ98 1225 aa22.19■■□□□ 1.14
LST1-208ENST00000376093 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
LST1-208ENST00000376093 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
LST1-208ENST00000376093 WDR62O43379 1518 aa22.13■■□□□ 1.13
LST1-208ENST00000376093 PRKAR2AP13861 404 aaKnown RBP22.13■■□□□ 1.13
LST1-208ENST00000376093 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
LST1-208ENST00000376093 CHADLQ6NUI6 762 aa22.04■■□□□ 1.12
LST1-208ENST00000376093 CFTRP13569 1480 aa22.03■■□□□ 1.12
LST1-208ENST00000376093 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
LST1-208ENST00000376093 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
LST1-208ENST00000376093 CREBZFQ9NS37 354 aa21.95■■□□□ 1.1
LST1-208ENST00000376093 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
LST1-208ENST00000376093 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
LST1-208ENST00000376093 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
LST1-208ENST00000376093 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
LST1-208ENST00000376093 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
LST1-208ENST00000376093 FARP1Q9Y4F1 1045 aaPredicted RBP21.8■■□□□ 1.08
LST1-208ENST00000376093 HAX1O00165 279 aa21.73■■□□□ 1.07
LST1-208ENST00000376093 MNX1P50219 401 aaPredicted RBP21.72■■□□□ 1.07
LST1-208ENST00000376093 C19orf67A6NJJ6 358 aa21.7■■□□□ 1.06
LST1-208ENST00000376093 EVX2Q03828 476 aa21.67■■□□□ 1.06
LST1-208ENST00000376093 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
LST1-208ENST00000376093 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
LST1-208ENST00000376093 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
LST1-208ENST00000376093 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
LST1-208ENST00000376093 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
LST1-208ENST00000376093 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
LST1-208ENST00000376093 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
LST1-208ENST00000376093 SP7Q8TDD2 431 aaPredicted RBP21.54■■□□□ 1.04
LST1-208ENST00000376093 MIER1Q8N108 512 aa21.53■■□□□ 1.04
LST1-208ENST00000376093 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
LST1-208ENST00000376093 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
LST1-208ENST00000376093 CD44P16070 742 aaKnown RBP21.47■■□□□ 1.03
LST1-208ENST00000376093 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
LST1-208ENST00000376093 PLCD3Q8N3E9 789 aa21.45■■□□□ 1.02
LST1-208ENST00000376093 CHD1O14646 1710 aa21.44■■□□□ 1.02
LST1-208ENST00000376093 NPM1P06748 294 aaKnown RBP eCLIP21.44■■□□□ 1.02
LST1-208ENST00000376093 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
LST1-208ENST00000376093 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
LST1-208ENST00000376093 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
LST1-208ENST00000376093 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
LST1-208ENST00000376093 VASPP50552 380 aaPredicted RBP21.4■■□□□ 1.02
LST1-208ENST00000376093 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.01
LST1-208ENST00000376093 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
LST1-208ENST00000376093 CUX1P39880 1505 aa21.34■■□□□ 1.01
LST1-208ENST00000376093 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
LST1-208ENST00000376093 SOGA1O94964 1423 aa21.29■■□□□ 1
LST1-208ENST00000376093 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
LST1-208ENST00000376093 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
LST1-208ENST00000376093 TDRD9Q8NDG6 1382 aaKnown RBP21.24■□□□□ 0.99
LST1-208ENST00000376093 ZNF579Q8NAF0 562 aaKnown RBP21.24■□□□□ 0.99
LST1-208ENST00000376093 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
LST1-208ENST00000376093 NUBP1P53384 320 aa21.19■□□□□ 0.98
LST1-208ENST00000376093 RASEFQ8IZ41 740 aa21.19■□□□□ 0.98
LST1-208ENST00000376093 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
LST1-208ENST00000376093 GABBR2O75899 941 aa21.16■□□□□ 0.98
LST1-208ENST00000376093 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
LST1-208ENST00000376093 PBRM1Q86U86 1689 aa21.14■□□□□ 0.97
LST1-208ENST00000376093 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
LST1-208ENST00000376093 IFNLR1Q8IU57 520 aaPredicted RBP21.11■□□□□ 0.97
LST1-208ENST00000376093 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
LST1-208ENST00000376093 TSPYL2Q9H2G4 693 aaPredicted RBP21.09■□□□□ 0.97
LST1-208ENST00000376093 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.97
LST1-208ENST00000376093 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.97
LST1-208ENST00000376093 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
LST1-208ENST00000376093 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
LST1-208ENST00000376093 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
LST1-208ENST00000376093 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
LST1-208ENST00000376093 PHF12Q96QT6 1004 aa21.06■□□□□ 0.96
LST1-208ENST00000376093 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
LST1-208ENST00000376093 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
LST1-208ENST00000376093 CLCN6P51797 869 aa21.04■□□□□ 0.96
LST1-208ENST00000376093 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
LST1-208ENST00000376093 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
LST1-208ENST00000376093 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
LST1-208ENST00000376093 KLHL34Q8N239 644 aa21■□□□□ 0.95
LST1-208ENST00000376093 FAM212AQ96EL1 285 aa20.92■□□□□ 0.94
LST1-208ENST00000376093 GALR2O43603 387 aaPredicted RBP20.91■□□□□ 0.94
LST1-208ENST00000376093 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
LST1-208ENST00000376093 KIF12Q96FN5 646 aa20.87■□□□□ 0.93
LST1-208ENST00000376093 SPOCK2Q92563 424 aa20.86■□□□□ 0.93
LST1-208ENST00000376093 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
LST1-208ENST00000376093 MS4A3Q96HJ5 214 aa20.83■□□□□ 0.93
LST1-208ENST00000376093 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
LST1-208ENST00000376093 POTEIP0CG38 1075 aa20.8■□□□□ 0.92
LST1-208ENST00000376093 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
LST1-208ENST00000376093 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
LST1-208ENST00000376093 DCAF8Q5TAQ9 597 aa20.78■□□□□ 0.92
LST1-208ENST00000376093 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
LST1-208ENST00000376093 MAP3K13O43283 966 aa20.77■□□□□ 0.92
LST1-208ENST00000376093 NUP160Q12769 1436 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms