RNA–Protein interactions for RNA: ENST00000371610.6

PARD6B-201, Transcript of par-6 family cell polarity regulator beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARD6B, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-201ENST00000371610 GOLGA3Q08378 1498 aa17.57■□□□□ 0.4
PARD6B-201ENST00000371610 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
PARD6B-201ENST00000371610 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
PARD6B-201ENST00000371610 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
PARD6B-201ENST00000371610 EEA1Q15075 1411 aa17.53■□□□□ 0.4
PARD6B-201ENST00000371610 NBR1Q14596 966 aa17.52■□□□□ 0.4
PARD6B-201ENST00000371610 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
PARD6B-201ENST00000371610 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
PARD6B-201ENST00000371610 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
PARD6B-201ENST00000371610 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
PARD6B-201ENST00000371610 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
PARD6B-201ENST00000371610 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.38
PARD6B-201ENST00000371610 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
PARD6B-201ENST00000371610 CFDP1Q9UEE9 299 aaPredicted RBP17.44■□□□□ 0.38
PARD6B-201ENST00000371610 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
PARD6B-201ENST00000371610 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
PARD6B-201ENST00000371610 ARXQ96QS3 562 aa17.43■□□□□ 0.38
PARD6B-201ENST00000371610 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
PARD6B-201ENST00000371610 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
PARD6B-201ENST00000371610 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
PARD6B-201ENST00000371610 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
PARD6B-201ENST00000371610 SOGA1O94964 1423 aa17.37■□□□□ 0.37
PARD6B-201ENST00000371610 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
PARD6B-201ENST00000371610 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
PARD6B-201ENST00000371610 NACADO15069 1562 aa17.3■□□□□ 0.36
PARD6B-201ENST00000371610 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
PARD6B-201ENST00000371610 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
PARD6B-201ENST00000371610 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
PARD6B-201ENST00000371610 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.36
PARD6B-201ENST00000371610 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
PARD6B-201ENST00000371610 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
PARD6B-201ENST00000371610 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
PARD6B-201ENST00000371610 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
PARD6B-201ENST00000371610 C14orf37Q86TY3 774 aa17.25■□□□□ 0.35
PARD6B-201ENST00000371610 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
PARD6B-201ENST00000371610 KANK4Q5T7N3 995 aaPredicted RBP17.24■□□□□ 0.35
PARD6B-201ENST00000371610 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
PARD6B-201ENST00000371610 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
PARD6B-201ENST00000371610 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
PARD6B-201ENST00000371610 A0A0G2JS52 829 aa17.2■□□□□ 0.34
PARD6B-201ENST00000371610 MYH16Q9H6N6 1097 aa17.19■□□□□ 0.34
PARD6B-201ENST00000371610 CUX2O14529 1486 aa17.19■□□□□ 0.34
PARD6B-201ENST00000371610 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
PARD6B-201ENST00000371610 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
PARD6B-201ENST00000371610 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
PARD6B-201ENST00000371610 FOXD1Q16676 465 aa17.16■□□□□ 0.34
PARD6B-201ENST00000371610 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
PARD6B-201ENST00000371610 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
PARD6B-201ENST00000371610 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
PARD6B-201ENST00000371610 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
PARD6B-201ENST00000371610 RGS3P49796 1198 aa17.13■□□□□ 0.33
PARD6B-201ENST00000371610 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
PARD6B-201ENST00000371610 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
PARD6B-201ENST00000371610 FRAT1Q92837 279 aaPredicted RBP17.11■□□□□ 0.33
PARD6B-201ENST00000371610 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
PARD6B-201ENST00000371610 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
PARD6B-201ENST00000371610 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
PARD6B-201ENST00000371610 FTSJ3Q8IY81 847 aaKnown RBP17.08■□□□□ 0.33
PARD6B-201ENST00000371610 POGKQ9P215 609 aa17.08■□□□□ 0.32
PARD6B-201ENST00000371610 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
PARD6B-201ENST00000371610 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
PARD6B-201ENST00000371610 BECN1Q14457 450 aa17.06■□□□□ 0.32
PARD6B-201ENST00000371610 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
PARD6B-201ENST00000371610 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
PARD6B-201ENST00000371610 PKD2Q13563 968 aa17.04■□□□□ 0.32
PARD6B-201ENST00000371610 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
PARD6B-201ENST00000371610 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
PARD6B-201ENST00000371610 SAFB2Q14151 953 aaKnown RBP eCLIP17.03■□□□□ 0.32
PARD6B-201ENST00000371610 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
PARD6B-201ENST00000371610 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
PARD6B-201ENST00000371610 MLECQ14165 292 aa17.01■□□□□ 0.31
PARD6B-201ENST00000371610 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
PARD6B-201ENST00000371610 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
PARD6B-201ENST00000371610 TMF1P82094 1093 aa17.01■□□□□ 0.31
PARD6B-201ENST00000371610 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
PARD6B-201ENST00000371610 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
PARD6B-201ENST00000371610 SOX12O15370 315 aa16.97■□□□□ 0.31
PARD6B-201ENST00000371610 TPRNQ4KMQ1 711 aa16.97■□□□□ 0.31
PARD6B-201ENST00000371610 GGT6Q6P531 493 aa16.96■□□□□ 0.31
PARD6B-201ENST00000371610 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
PARD6B-201ENST00000371610 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
PARD6B-201ENST00000371610 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
PARD6B-201ENST00000371610 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
PARD6B-201ENST00000371610 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
PARD6B-201ENST00000371610 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
PARD6B-201ENST00000371610 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
PARD6B-201ENST00000371610 STK26Q9P289 416 aa16.9■□□□□ 0.3
PARD6B-201ENST00000371610 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
PARD6B-201ENST00000371610 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
PARD6B-201ENST00000371610 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
PARD6B-201ENST00000371610 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
PARD6B-201ENST00000371610 NUP155O75694 1391 aa16.88■□□□□ 0.29
PARD6B-201ENST00000371610 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
PARD6B-201ENST00000371610 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
PARD6B-201ENST00000371610 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
PARD6B-201ENST00000371610 KANK1Q14678 1352 aa16.84■□□□□ 0.29
PARD6B-201ENST00000371610 WIZO95785 1651 aa16.82■□□□□ 0.28
PARD6B-201ENST00000371610 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
PARD6B-201ENST00000371610 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
PARD6B-201ENST00000371610 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 720.3 ms