RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 PRM3Q9NNZ6 103 aa11.27□□□□□ -0.61
VANGL1-204ENST00000369510 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
VANGL1-204ENST00000369510 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
VANGL1-204ENST00000369510 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
VANGL1-204ENST00000369510 CCDC34Q96HJ3 373 aa11.24□□□□□ -0.61
VANGL1-204ENST00000369510 HSP90B1P14625 803 aaKnown RBP11.22□□□□□ -0.61
VANGL1-204ENST00000369510 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
VANGL1-204ENST00000369510 GOLGA6L3A6NEY3 463 aa11.21□□□□□ -0.61
VANGL1-204ENST00000369510 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.61
VANGL1-204ENST00000369510 GPS2Q13227 327 aa11.19□□□□□ -0.62
VANGL1-204ENST00000369510 KRI1Q8N9T8 703 aaKnown RBP11.19□□□□□ -0.62
VANGL1-204ENST00000369510 FKBP8Q14318 412 aa11.18□□□□□ -0.62
VANGL1-204ENST00000369510 APPP05067 770 aa11.18□□□□□ -0.62
VANGL1-204ENST00000369510 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
VANGL1-204ENST00000369510 NBR1Q14596 966 aa11.18□□□□□ -0.62
VANGL1-204ENST00000369510 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
VANGL1-204ENST00000369510 ARXQ96QS3 562 aa11.17□□□□□ -0.62
VANGL1-204ENST00000369510 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
VANGL1-204ENST00000369510 TPM4P67936 248 aa11.16□□□□□ -0.62
VANGL1-204ENST00000369510 CEP89Q96ST8 783 aa11.16□□□□□ -0.62
VANGL1-204ENST00000369510 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
VANGL1-204ENST00000369510 CCDC70Q6NSX1 233 aa11.14□□□□□ -0.63
VANGL1-204ENST00000369510 CLSTN1O94985 981 aa11.12□□□□□ -0.63
VANGL1-204ENST00000369510 CDR1P51861 262 aa11.11□□□□□ -0.63
VANGL1-204ENST00000369510 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
VANGL1-204ENST00000369510 SEPT11Q9NVA2 429 aaKnown RBP11.1□□□□□ -0.63
VANGL1-204ENST00000369510 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
VANGL1-204ENST00000369510 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
VANGL1-204ENST00000369510 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
VANGL1-204ENST00000369510 SYAP1Q96A49 352 aaPredicted RBP11.09□□□□□ -0.63
VANGL1-204ENST00000369510 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
VANGL1-204ENST00000369510 PHF14O94880 888 aa11.09□□□□□ -0.63
VANGL1-204ENST00000369510 MEX3CQ5U5Q3 659 aaKnown RBP11.07□□□□□ -0.64
VANGL1-204ENST00000369510 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
VANGL1-204ENST00000369510 HMGB1P09429 215 aaKnown RBP11.06□□□□□ -0.64
VANGL1-204ENST00000369510 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
VANGL1-204ENST00000369510 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
VANGL1-204ENST00000369510 TEX35Q5T0J7 233 aa11.06□□□□□ -0.64
VANGL1-204ENST00000369510 NCBP3Q53F19 620 aaKnown RBP11.05□□□□□ -0.64
VANGL1-204ENST00000369510 MIER1Q8N108 512 aa11.05□□□□□ -0.64
VANGL1-204ENST00000369510 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
VANGL1-204ENST00000369510 ZRSR2Q15696 482 aaKnown RBP11.05□□□□□ -0.64
VANGL1-204ENST00000369510 TPM3P06753 285 aa11.05□□□□□ -0.64
VANGL1-204ENST00000369510 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
VANGL1-204ENST00000369510 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
VANGL1-204ENST00000369510 FGD1P98174 961 aa11.03□□□□□ -0.64
VANGL1-204ENST00000369510 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
VANGL1-204ENST00000369510 MCCP23508 829 aa11.03□□□□□ -0.64
VANGL1-204ENST00000369510 ANO8Q9HCE9 1232 aaPredicted RBP11.03□□□□□ -0.64
VANGL1-204ENST00000369510 INCENPQ9NQS7 918 aa11.02□□□□□ -0.65
VANGL1-204ENST00000369510 MS4A1P11836 297 aa11.02□□□□□ -0.65
VANGL1-204ENST00000369510 PLCB2Q00722 1185 aa11.02□□□□□ -0.65
VANGL1-204ENST00000369510 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.65
VANGL1-204ENST00000369510 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
VANGL1-204ENST00000369510 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
VANGL1-204ENST00000369510 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
VANGL1-204ENST00000369510 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
VANGL1-204ENST00000369510 MYO15BQ96JP2 1530 aa11□□□□□ -0.65
VANGL1-204ENST00000369510 P3H3Q8IVL6 736 aa11□□□□□ -0.65
VANGL1-204ENST00000369510 RDXP35241 583 aaKnown RBP11□□□□□ -0.65
VANGL1-204ENST00000369510 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
VANGL1-204ENST00000369510 CWC15Q9P013 229 aaKnown RBP10.99□□□□□ -0.65
VANGL1-204ENST00000369510 ACBD3Q9H3P7 528 aa10.98□□□□□ -0.65
VANGL1-204ENST00000369510 HMGN5P82970 282 aaKnown RBP10.97□□□□□ -0.65
VANGL1-204ENST00000369510 GNL2Q13823 731 aaKnown RBP10.97□□□□□ -0.65
VANGL1-204ENST00000369510 HMGB1P1B2RPK0 211 aaPredicted RBP10.97□□□□□ -0.65
VANGL1-204ENST00000369510 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
VANGL1-204ENST00000369510 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.66
VANGL1-204ENST00000369510 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.66
VANGL1-204ENST00000369510 HIRIP3Q9BW71 556 aaPredicted RBP10.95□□□□□ -0.66
VANGL1-204ENST00000369510 MAP7D2Q96T17 732 aa10.95□□□□□ -0.66
VANGL1-204ENST00000369510 HMGB3O15347 200 aaKnown RBP10.94□□□□□ -0.66
VANGL1-204ENST00000369510 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
VANGL1-204ENST00000369510 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
VANGL1-204ENST00000369510 RSPH6AQ9H0K4 717 aa10.94□□□□□ -0.66
VANGL1-204ENST00000369510 AK7Q96M32 723 aa10.94□□□□□ -0.66
VANGL1-204ENST00000369510 GBP4Q96PP9 640 aa10.94□□□□□ -0.66
VANGL1-204ENST00000369510 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
VANGL1-204ENST00000369510 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
VANGL1-204ENST00000369510 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
VANGL1-204ENST00000369510 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
VANGL1-204ENST00000369510 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
VANGL1-204ENST00000369510 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
VANGL1-204ENST00000369510 TPM1P09493 284 aa10.92□□□□□ -0.66
VANGL1-204ENST00000369510 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
VANGL1-204ENST00000369510 DYDC1Q8WWB3 177 aa10.92□□□□□ -0.66
VANGL1-204ENST00000369510 KCNJ4P48050 445 aa10.91□□□□□ -0.66
VANGL1-204ENST00000369510 MTERF4Q7Z6M4 381 aaKnown RBP10.91□□□□□ -0.66
VANGL1-204ENST00000369510 TPM2P07951 284 aa10.91□□□□□ -0.66
VANGL1-204ENST00000369510 HSP90AA2PQ14568 343 aaPredicted RBP10.91□□□□□ -0.66
VANGL1-204ENST00000369510 GOLGA6L7A0A1B0GV03 622 aa10.91□□□□□ -0.66
VANGL1-204ENST00000369510 FEZ1Q99689 392 aa10.91□□□□□ -0.66
VANGL1-204ENST00000369510 TMC1Q8TDI8 760 aa10.91□□□□□ -0.66
VANGL1-204ENST00000369510 SCRIBQ14160 1630 aa10.9□□□□□ -0.67
VANGL1-204ENST00000369510 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
VANGL1-204ENST00000369510 USP8P40818 1118 aa10.88□□□□□ -0.67
VANGL1-204ENST00000369510 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
VANGL1-204ENST00000369510 ARGLU1Q9NWB6 273 aaPredicted RBP10.88□□□□□ -0.67
VANGL1-204ENST00000369510 CCDC66A2RUB6 948 aa10.88□□□□□ -0.67
VANGL1-204ENST00000369510 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms