RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 PAK3O75914 559 aaPredicted RBP9.23□□□□□ -0.93
RNU4-48P-201ENST00000365559 PKD2Q13563 968 aa9.23□□□□□ -0.93
RNU4-48P-201ENST00000365559 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
RNU4-48P-201ENST00000365559 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
RNU4-48P-201ENST00000365559 CCDC61Q9Y6R9 512 aa9.22□□□□□ -0.93
RNU4-48P-201ENST00000365559 PYGBP11216 843 aa9.17□□□□□ -0.94
RNU4-48P-201ENST00000365559 PHF12Q96QT6 1004 aa9.17□□□□□ -0.94
RNU4-48P-201ENST00000365559 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
RNU4-48P-201ENST00000365559 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
RNU4-48P-201ENST00000365559 CHRM1P11229 460 aaPredicted RBP9.13□□□□□ -0.95
RNU4-48P-201ENST00000365559 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
RNU4-48P-201ENST00000365559 TRIM41Q8WV44 630 aa9.12□□□□□ -0.95
RNU4-48P-201ENST00000365559 MAP3K13O43283 966 aa9.11□□□□□ -0.95
RNU4-48P-201ENST00000365559 RGL2O15211 777 aa9.09□□□□□ -0.95
RNU4-48P-201ENST00000365559 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
RNU4-48P-201ENST00000365559 PCDHB13Q9Y5F0 798 aa9.07□□□□□ -0.96
RNU4-48P-201ENST00000365559 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
RNU4-48P-201ENST00000365559 SP7Q8TDD2 431 aaPredicted RBP9.05□□□□□ -0.96
RNU4-48P-201ENST00000365559 MS4A3Q96HJ5 214 aa9.05□□□□□ -0.96
RNU4-48P-201ENST00000365559 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
RNU4-48P-201ENST00000365559 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
RNU4-48P-201ENST00000365559 GABBR2O75899 941 aa9.04□□□□□ -0.96
RNU4-48P-201ENST00000365559 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
RNU4-48P-201ENST00000365559 RIOK3O14730 519 aaKnown RBP9.02□□□□□ -0.97
RNU4-48P-201ENST00000365559 ZNF467Q7Z7K2 595 aaPredicted RBP9.01□□□□□ -0.97
RNU4-48P-201ENST00000365559 CLCN6P51797 869 aa9□□□□□ -0.97
RNU4-48P-201ENST00000365559 TRPC6Q9Y210 931 aa9□□□□□ -0.97
RNU4-48P-201ENST00000365559 DCAF8L2P0C7V8 631 aa8.97□□□□□ -0.97
RNU4-48P-201ENST00000365559 VGFO15240 615 aaPredicted RBP8.95□□□□□ -0.98
RNU4-48P-201ENST00000365559 PDAP1Q13442 181 aaKnown RBP8.95□□□□□ -0.98
RNU4-48P-201ENST00000365559 PSEN1P49768 467 aa8.94□□□□□ -0.98
RNU4-48P-201ENST00000365559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.93□□□□□ -0.98
RNU4-48P-201ENST00000365559 ZFP91Q96JP5 570 aaPredicted RBP8.93□□□□□ -0.98
RNU4-48P-201ENST00000365559 BMP2KQ9NSY1 1161 aaPredicted RBP8.92□□□□□ -0.98
RNU4-48P-201ENST00000365559 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
RNU4-48P-201ENST00000365559 TAOK2Q9UL54 1235 aa8.91□□□□□ -0.98
RNU4-48P-201ENST00000365559 TTLL13PA6NNM8 815 aa8.9□□□□□ -0.98
RNU4-48P-201ENST00000365559 TIE1P35590 1138 aa8.9□□□□□ -0.98
RNU4-48P-201ENST00000365559 CHGAP10645 457 aaKnown RBP8.89□□□□□ -0.99
RNU4-48P-201ENST00000365559 STK25O00506 426 aa8.88□□□□□ -0.99
RNU4-48P-201ENST00000365559 ATMINO43313 823 aaPredicted RBP8.88□□□□□ -0.99
RNU4-48P-201ENST00000365559 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
RNU4-48P-201ENST00000365559 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
RNU4-48P-201ENST00000365559 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
RNU4-48P-201ENST00000365559 ASTLQ6HA08 431 aaPredicted RBP8.87□□□□□ -0.99
RNU4-48P-201ENST00000365559 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
RNU4-48P-201ENST00000365559 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
RNU4-48P-201ENST00000365559 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
RNU4-48P-201ENST00000365559 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
RNU4-48P-201ENST00000365559 CABP2Q9NPB3 220 aa8.83□□□□□ -1
RNU4-48P-201ENST00000365559 TRIM35Q9UPQ4 493 aa8.83□□□□□ -1
RNU4-48P-201ENST00000365559 EFCAB3Q8N7B9 438 aa8.8□□□□□ -1
RNU4-48P-201ENST00000365559 GOLGA2Q08379 1002 aa8.78□□□□□ -1
RNU4-48P-201ENST00000365559 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
RNU4-48P-201ENST00000365559 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1.01
RNU4-48P-201ENST00000365559 MKRN3Q13064 507 aaKnown RBP8.76□□□□□ -1.01
RNU4-48P-201ENST00000365559 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
RNU4-48P-201ENST00000365559 IER5LQ5T953 404 aa8.73□□□□□ -1.01
RNU4-48P-201ENST00000365559 SLC39A7Q92504 469 aa8.73□□□□□ -1.01
RNU4-48P-201ENST00000365559 MFRPQ9BY79 579 aa8.73□□□□□ -1.01
RNU4-48P-201ENST00000365559 SOX12O15370 315 aa8.72□□□□□ -1.01
RNU4-48P-201ENST00000365559 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
RNU4-48P-201ENST00000365559 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
RNU4-48P-201ENST00000365559 C7P10643 843 aa8.71□□□□□ -1.02
RNU4-48P-201ENST00000365559 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
RNU4-48P-201ENST00000365559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.02
RNU4-48P-201ENST00000365559 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
RNU4-48P-201ENST00000365559 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
RNU4-48P-201ENST00000365559 ILDR1Q86SU0 546 aaPredicted RBP8.7□□□□□ -1.02
RNU4-48P-201ENST00000365559 FBXO22Q8NEZ5 403 aa8.69□□□□□ -1.02
RNU4-48P-201ENST00000365559 NLRP6P59044 892 aa8.68□□□□□ -1.02
RNU4-48P-201ENST00000365559 PDCD7Q8N8D1 485 aaKnown RBP8.68□□□□□ -1.02
RNU4-48P-201ENST00000365559 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
RNU4-48P-201ENST00000365559 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
RNU4-48P-201ENST00000365559 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
RNU4-48P-201ENST00000365559 SEC24BO95487 1268 aa8.67□□□□□ -1.02
RNU4-48P-201ENST00000365559 OCEL1Q9H607 264 aa8.67□□□□□ -1.02
RNU4-48P-201ENST00000365559 PLCG2P16885 1265 aa8.66□□□□□ -1.02
RNU4-48P-201ENST00000365559 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
RNU4-48P-201ENST00000365559 PAXIP1Q6ZW49 1069 aaPredicted RBP8.65□□□□□ -1.02
RNU4-48P-201ENST00000365559 SPRYD3Q8NCJ5 442 aa8.63□□□□□ -1.03
RNU4-48P-201ENST00000365559 CFAP44Q96MT7 982 aa8.63□□□□□ -1.03
RNU4-48P-201ENST00000365559 PPP1R37O75864 691 aa8.62□□□□□ -1.03
RNU4-48P-201ENST00000365559 RYDENQ9NUL5 291 aaKnown RBP8.61□□□□□ -1.03
RNU4-48P-201ENST00000365559 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
RNU4-48P-201ENST00000365559 PLCB2Q00722 1185 aa8.59□□□□□ -1.03
RNU4-48P-201ENST00000365559 POTEJP0CG39 1038 aa8.57□□□□□ -1.04
RNU4-48P-201ENST00000365559 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
RNU4-48P-201ENST00000365559 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
RNU4-48P-201ENST00000365559 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
RNU4-48P-201ENST00000365559 TMEM121BQ9BXQ6 578 aaPredicted RBP8.53□□□□□ -1.04
RNU4-48P-201ENST00000365559 G3V3G9 751 aa8.5□□□□□ -1.05
RNU4-48P-201ENST00000365559 LHX8Q68G74 356 aa8.5□□□□□ -1.05
RNU4-48P-201ENST00000365559 TSHZ2Q9NRE2 1034 aa8.5□□□□□ -1.05
RNU4-48P-201ENST00000365559 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
RNU4-48P-201ENST00000365559 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
RNU4-48P-201ENST00000365559 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
RNU4-48P-201ENST00000365559 TMEM92Q6UXU6 159 aa8.45□□□□□ -1.06
RNU4-48P-201ENST00000365559 OTUD5Q96G74 571 aa8.45□□□□□ -1.06
RNU4-48P-201ENST00000365559 MAMSTRQ6ZN01 415 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms