RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
CTNND1-203ENST00000361391 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
CTNND1-203ENST00000361391 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
CTNND1-203ENST00000361391 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-203ENST00000361391 AEBP2Q6ZN18 517 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-203ENST00000361391 GLIPR1L2Q4G1C9 344 aa10.69□□□□□ -0.7
CTNND1-203ENST00000361391 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
CTNND1-203ENST00000361391 DCAF1Q9Y4B6 1507 aa10.69□□□□□ -0.7
CTNND1-203ENST00000361391 RGL3Q3MIN7 710 aa10.68□□□□□ -0.7
CTNND1-203ENST00000361391 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
CTNND1-203ENST00000361391 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
CTNND1-203ENST00000361391 MTUS2Q5JR59 1369 aa10.67□□□□□ -0.7
CTNND1-203ENST00000361391 NPHP1O15259 732 aa10.66□□□□□ -0.7
CTNND1-203ENST00000361391 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
CTNND1-203ENST00000361391 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
CTNND1-203ENST00000361391 TSPY4P0CV99 314 aa10.65□□□□□ -0.7
CTNND1-203ENST00000361391 TSPY10P0CW01 314 aa10.65□□□□□ -0.7
CTNND1-203ENST00000361391 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-203ENST00000361391 ARID4BQ4LE39 1312 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-203ENST00000361391 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNND1-203ENST00000361391 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
CTNND1-203ENST00000361391 CCDC180Q9P1Z9 1646 aa10.63□□□□□ -0.71
CTNND1-203ENST00000361391 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
CTNND1-203ENST00000361391 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
CTNND1-203ENST00000361391 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
CTNND1-203ENST00000361391 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-203ENST00000361391 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-203ENST00000361391 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
CTNND1-203ENST00000361391 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-203ENST00000361391 TNNT2P45379 298 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-203ENST00000361391 BECN1Q14457 450 aa10.6□□□□□ -0.71
CTNND1-203ENST00000361391 CLIP1P30622 1438 aa10.59□□□□□ -0.71
CTNND1-203ENST00000361391 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
CTNND1-203ENST00000361391 RGS3P49796 1198 aa10.57□□□□□ -0.72
CTNND1-203ENST00000361391 PTMAP06454 111 aaKnown RBP10.57□□□□□ -0.72
CTNND1-203ENST00000361391 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
CTNND1-203ENST00000361391 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
CTNND1-203ENST00000361391 FRAT1Q92837 279 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-203ENST00000361391 DNTTIP2Q5QJE6 756 aaKnown RBP10.54□□□□□ -0.72
CTNND1-203ENST00000361391 SIN3AQ96ST3 1273 aa10.54□□□□□ -0.72
CTNND1-203ENST00000361391 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
CTNND1-203ENST00000361391 GOLGA6L22H0YM25 854 aa10.53□□□□□ -0.72
CTNND1-203ENST00000361391 CARD11Q9BXL7 1154 aa10.53□□□□□ -0.72
CTNND1-203ENST00000361391 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
CTNND1-203ENST00000361391 ANP32EQ9BTT0 268 aa10.52□□□□□ -0.73
CTNND1-203ENST00000361391 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
CTNND1-203ENST00000361391 NAP1L5Q96NT1 182 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-203ENST00000361391 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
CTNND1-203ENST00000361391 CEP162Q5TB80 1403 aa10.51□□□□□ -0.73
CTNND1-203ENST00000361391 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
CTNND1-203ENST00000361391 CFAP53Q96M91 514 aa10.5□□□□□ -0.73
CTNND1-203ENST00000361391 ZRSR1Q15695 479 aaKnown RBP10.5□□□□□ -0.73
CTNND1-203ENST00000361391 CASC1Q6TDU7 716 aa10.49□□□□□ -0.73
CTNND1-203ENST00000361391 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-203ENST00000361391 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
CTNND1-203ENST00000361391 SOX12O15370 315 aa10.47□□□□□ -0.73
CTNND1-203ENST00000361391 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
CTNND1-203ENST00000361391 U2SURPO15042 1029 aaKnown RBP10.47□□□□□ -0.73
CTNND1-203ENST00000361391 PHF23Q9BUL5 403 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-203ENST00000361391 PLEKHD1A6NEE1 506 aa10.46□□□□□ -0.73
CTNND1-203ENST00000361391 HSP90AB1P08238 724 aaKnown RBP10.46□□□□□ -0.73
CTNND1-203ENST00000361391 NOP58Q9Y2X3 529 aaKnown RBP10.46□□□□□ -0.73
CTNND1-203ENST00000361391 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-203ENST00000361391 OS9Q13438 667 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-203ENST00000361391 GOLGA3Q08378 1498 aa10.45□□□□□ -0.74
CTNND1-203ENST00000361391 POGKQ9P215 609 aa10.44□□□□□ -0.74
CTNND1-203ENST00000361391 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-203ENST00000361391 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-203ENST00000361391 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
CTNND1-203ENST00000361391 RSF1Q96T23 1441 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-203ENST00000361391 SAFB2Q14151 953 aaKnown RBP eCLIP10.42□□□□□ -0.74
CTNND1-203ENST00000361391 CLSTN1O94985 981 aa10.42□□□□□ -0.74
CTNND1-203ENST00000361391 FGD1P98174 961 aa10.41□□□□□ -0.74
CTNND1-203ENST00000361391 RB1CC1Q8TDY2 1594 aa10.4□□□□□ -0.74
CTNND1-203ENST00000361391 KCNJ4P48050 445 aa10.4□□□□□ -0.74
CTNND1-203ENST00000361391 APBB1O00213 710 aa10.39□□□□□ -0.75
CTNND1-203ENST00000361391 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
CTNND1-203ENST00000361391 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
CTNND1-203ENST00000361391 DCAF11Q8TEB1 546 aa10.38□□□□□ -0.75
CTNND1-203ENST00000361391 ARID3AQ99856 593 aa10.38□□□□□ -0.75
CTNND1-203ENST00000361391 NUDCQ9Y266 331 aa10.38□□□□□ -0.75
CTNND1-203ENST00000361391 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
CTNND1-203ENST00000361391 MLECQ14165 292 aa10.37□□□□□ -0.75
CTNND1-203ENST00000361391 FOXD1Q16676 465 aa10.37□□□□□ -0.75
CTNND1-203ENST00000361391 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
CTNND1-203ENST00000361391 PRM3Q9NNZ6 103 aa10.36□□□□□ -0.75
CTNND1-203ENST00000361391 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
CTNND1-203ENST00000361391 HSCBQ8IWL3 235 aa10.35□□□□□ -0.75
CTNND1-203ENST00000361391 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
CTNND1-203ENST00000361391 EIF4G1Q04637 1599 aaKnown RBP10.34□□□□□ -0.75
CTNND1-203ENST00000361391 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
CTNND1-203ENST00000361391 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
CTNND1-203ENST00000361391 GOLGA2Q08379 1002 aa10.33□□□□□ -0.76
CTNND1-203ENST00000361391 GZF1Q9H116 711 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-203ENST00000361391 STK26Q9P289 416 aa10.33□□□□□ -0.76
CTNND1-203ENST00000361391 DRC7Q8IY82 874 aa10.32□□□□□ -0.76
CTNND1-203ENST00000361391 GOLGA6L4A6NEF3 574 aa10.31□□□□□ -0.76
CTNND1-203ENST00000361391 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
CTNND1-203ENST00000361391 TMF1P82094 1093 aa10.31□□□□□ -0.76
CTNND1-203ENST00000361391 HSPA5P11021 654 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms