RNA–Protein interactions for RNA: ENST00000338502.8

SPRED3-201, Transcript of sprouty related EVH1 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED3, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-201ENST00000338502 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
SPRED3-201ENST00000338502 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
SPRED3-201ENST00000338502 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
SPRED3-201ENST00000338502 WDR43Q15061 677 aaKnown RBP eCLIP24.03■■□□□ 1.44
SPRED3-201ENST00000338502 KIF27Q86VH2 1401 aa24.02■■□□□ 1.44
SPRED3-201ENST00000338502 HSP90AA1P07900 732 aaKnown RBP23.98■■□□□ 1.43
SPRED3-201ENST00000338502 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
SPRED3-201ENST00000338502 IRX6P78412 446 aaPredicted RBP23.91■■□□□ 1.42
SPRED3-201ENST00000338502 PLEKHD1A6NEE1 506 aa23.91■■□□□ 1.42
SPRED3-201ENST00000338502 ANP32BQ92688 251 aaKnown RBP23.91■■□□□ 1.42
SPRED3-201ENST00000338502 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.42
SPRED3-201ENST00000338502 CFDP1Q9UEE9 299 aaPredicted RBP23.81■■□□□ 1.4
SPRED3-201ENST00000338502 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
SPRED3-201ENST00000338502 NBR1Q14596 966 aa23.79■■□□□ 1.4
SPRED3-201ENST00000338502 CCNB3Q8WWL7 1395 aa23.75■■□□□ 1.39
SPRED3-201ENST00000338502 RGL3Q3MIN7 710 aa23.74■■□□□ 1.39
SPRED3-201ENST00000338502 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
SPRED3-201ENST00000338502 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
SPRED3-201ENST00000338502 CDCA8Q53HL2 280 aa23.71■■□□□ 1.39
SPRED3-201ENST00000338502 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
SPRED3-201ENST00000338502 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
SPRED3-201ENST00000338502 EIF5BO60841 1220 aaKnown RBP23.7■■□□□ 1.38
SPRED3-201ENST00000338502 SOGA1O94964 1423 aa23.7■■□□□ 1.38
SPRED3-201ENST00000338502 SUPT16HQ9Y5B9 1047 aaKnown RBP23.69■■□□□ 1.38
SPRED3-201ENST00000338502 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
SPRED3-201ENST00000338502 KNSTRNQ9Y448 316 aa23.64■■□□□ 1.37
SPRED3-201ENST00000338502 MYH16Q9H6N6 1097 aa23.62■■□□□ 1.37
SPRED3-201ENST00000338502 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
SPRED3-201ENST00000338502 DDRGK1Q96HY6 314 aa23.61■■□□□ 1.37
SPRED3-201ENST00000338502 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
SPRED3-201ENST00000338502 PLPPR3Q6T4P5 718 aa23.59■■□□□ 1.37
SPRED3-201ENST00000338502 CFAP53Q96M91 514 aa23.58■■□□□ 1.37
SPRED3-201ENST00000338502 PPP4R2Q9NY27 417 aa23.57■■□□□ 1.36
SPRED3-201ENST00000338502 BECN1Q14457 450 aa23.56■■□□□ 1.36
SPRED3-201ENST00000338502 CUX2O14529 1486 aa23.54■■□□□ 1.36
SPRED3-201ENST00000338502 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
SPRED3-201ENST00000338502 PPP1R15AO75807 674 aaPredicted RBP23.49■■□□□ 1.35
SPRED3-201ENST00000338502 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
SPRED3-201ENST00000338502 CCER2I3L3R5 266 aa23.49■■□□□ 1.35
SPRED3-201ENST00000338502 ANP32EQ9BTT0 268 aa23.48■■□□□ 1.35
SPRED3-201ENST00000338502 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
SPRED3-201ENST00000338502 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
SPRED3-201ENST00000338502 ARXQ96QS3 562 aa23.47■■□□□ 1.35
SPRED3-201ENST00000338502 KANK4Q5T7N3 995 aaPredicted RBP23.42■■□□□ 1.34
SPRED3-201ENST00000338502 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.34
SPRED3-201ENST00000338502 GLIPR1L2Q4G1C9 344 aa23.37■■□□□ 1.33
SPRED3-201ENST00000338502 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
SPRED3-201ENST00000338502 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
SPRED3-201ENST00000338502 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
SPRED3-201ENST00000338502 FTSJ3Q8IY81 847 aaKnown RBP23.36■■□□□ 1.33
SPRED3-201ENST00000338502 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
SPRED3-201ENST00000338502 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
SPRED3-201ENST00000338502 NEUROD2Q15784 382 aa23.35■■□□□ 1.33
SPRED3-201ENST00000338502 TMF1P82094 1093 aa23.34■■□□□ 1.33
SPRED3-201ENST00000338502 GOLGA6L22H0YM25 854 aa23.34■■□□□ 1.33
SPRED3-201ENST00000338502 MAPK8IP3Q9UPT6 1336 aa23.33■■□□□ 1.33
SPRED3-201ENST00000338502 B4GALNT3Q6L9W6 998 aa23.32■■□□□ 1.32
SPRED3-201ENST00000338502 HSPA5P11021 654 aaKnown RBP23.31■■□□□ 1.32
SPRED3-201ENST00000338502 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
SPRED3-201ENST00000338502 RAB3GAP2Q9H2M9 1393 aa23.29■■□□□ 1.32
SPRED3-201ENST00000338502 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
SPRED3-201ENST00000338502 RGS3P49796 1198 aa23.27■■□□□ 1.32
SPRED3-201ENST00000338502 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
SPRED3-201ENST00000338502 NCLP19338 710 aaKnown RBP23.25■■□□□ 1.31
SPRED3-201ENST00000338502 MS4A1P11836 297 aa23.25■■□□□ 1.31
SPRED3-201ENST00000338502 POGKQ9P215 609 aa23.25■■□□□ 1.31
SPRED3-201ENST00000338502 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
SPRED3-201ENST00000338502 ERCC6Q03468 1493 aa23.25■■□□□ 1.31
SPRED3-201ENST00000338502 TRIM44Q96DX7 344 aaPredicted RBP23.25■■□□□ 1.31
SPRED3-201ENST00000338502 NOP58Q9Y2X3 529 aaKnown RBP23.25■■□□□ 1.31
SPRED3-201ENST00000338502 FMN1Q68DA7 1419 aa23.24■■□□□ 1.31
SPRED3-201ENST00000338502 FRAT1Q92837 279 aaPredicted RBP23.24■■□□□ 1.31
SPRED3-201ENST00000338502 PKD2Q13563 968 aa23.23■■□□□ 1.31
SPRED3-201ENST00000338502 CHMP4BQ9H444 224 aaKnown RBP23.23■■□□□ 1.31
SPRED3-201ENST00000338502 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
SPRED3-201ENST00000338502 TNNT2P45379 298 aaPredicted RBP23.2■■□□□ 1.3
SPRED3-201ENST00000338502 CASC1Q6TDU7 716 aa23.19■■□□□ 1.3
SPRED3-201ENST00000338502 ZBTB7CA1YPR0 619 aa23.19■■□□□ 1.3
SPRED3-201ENST00000338502 KANK1Q14678 1352 aa23.18■■□□□ 1.3
SPRED3-201ENST00000338502 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
SPRED3-201ENST00000338502 LAS1LQ9Y4W2 734 aaKnown RBP23.17■■□□□ 1.3
SPRED3-201ENST00000338502 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
SPRED3-201ENST00000338502 PNNQ9H307 717 aaKnown RBP23.16■■□□□ 1.3
SPRED3-201ENST00000338502 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
SPRED3-201ENST00000338502 FOXD1Q16676 465 aa23.13■■□□□ 1.29
SPRED3-201ENST00000338502 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
SPRED3-201ENST00000338502 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
SPRED3-201ENST00000338502 RBM19Q9Y4C8 960 aaKnown RBP23.11■■□□□ 1.29
SPRED3-201ENST00000338502 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
SPRED3-201ENST00000338502 KTN1Q86UP2 1357 aaKnown RBP23.11■■□□□ 1.29
SPRED3-201ENST00000338502 CARMIL2Q6F5E8 1435 aa23.11■■□□□ 1.29
SPRED3-201ENST00000338502 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
SPRED3-201ENST00000338502 RALBP1Q15311 655 aa23.07■■□□□ 1.28
SPRED3-201ENST00000338502 MORC1Q86VD1 984 aa23.07■■□□□ 1.28
SPRED3-201ENST00000338502 WIZO95785 1651 aa23.07■■□□□ 1.28
SPRED3-201ENST00000338502 NUP155O75694 1391 aa23.07■■□□□ 1.28
SPRED3-201ENST00000338502 ANKRD30AQ9BXX3 1397 aa23.05■■□□□ 1.28
SPRED3-201ENST00000338502 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
SPRED3-201ENST00000338502 A0A0G2JS52 829 aa23.03■■□□□ 1.28
SPRED3-201ENST00000338502 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms