RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
CAST-203ENST00000338252 ITGAEP38570 1179 aa9.63□□□□□ -0.87
CAST-203ENST00000338252 MROH2BQ7Z745 1585 aa9.62□□□□□ -0.87
CAST-203ENST00000338252 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
CAST-203ENST00000338252 DAXXQ9UER7 740 aaPredicted RBP9.61□□□□□ -0.87
CAST-203ENST00000338252 ARAP1Q96P48 1450 aa9.6□□□□□ -0.87
CAST-203ENST00000338252 NEFLP07196 543 aa9.6□□□□□ -0.87
CAST-203ENST00000338252 URB2Q14146 1524 aaKnown RBP9.58□□□□□ -0.88
CAST-203ENST00000338252 DHX57Q6P158 1386 aaKnown RBP9.57□□□□□ -0.88
CAST-203ENST00000338252 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
CAST-203ENST00000338252 CCDC136Q96JN2 1154 aa9.56□□□□□ -0.88
CAST-203ENST00000338252 FBLN2P98095 1184 aa9.55□□□□□ -0.88
CAST-203ENST00000338252 CFTRP13569 1480 aa9.55□□□□□ -0.88
CAST-203ENST00000338252 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
CAST-203ENST00000338252 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
CAST-203ENST00000338252 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
CAST-203ENST00000338252 ABCC8Q09428 1581 aa9.51□□□□□ -0.89
CAST-203ENST00000338252 CCDC88BA6NC98 1476 aa9.5□□□□□ -0.89
CAST-203ENST00000338252 KCNA4P22459 653 aa9.49□□□□□ -0.89
CAST-203ENST00000338252 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
CAST-203ENST00000338252 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
CAST-203ENST00000338252 SOGA1O94964 1423 aa9.48□□□□□ -0.89
CAST-203ENST00000338252 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
CAST-203ENST00000338252 EEA1Q15075 1411 aa9.47□□□□□ -0.89
CAST-203ENST00000338252 WIZO95785 1651 aa9.46□□□□□ -0.89
CAST-203ENST00000338252 NBR1Q14596 966 aa9.46□□□□□ -0.9
CAST-203ENST00000338252 GOLGA3Q08378 1498 aa9.46□□□□□ -0.9
CAST-203ENST00000338252 CCER2I3L3R5 266 aa9.45□□□□□ -0.9
CAST-203ENST00000338252 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
CAST-203ENST00000338252 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
CAST-203ENST00000338252 CHD1O14646 1710 aa9.45□□□□□ -0.9
CAST-203ENST00000338252 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
CAST-203ENST00000338252 EIF4G3O43432 1585 aaKnown RBP9.44□□□□□ -0.9
CAST-203ENST00000338252 AQRO60306 1485 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■■■■□ 24.4
CAST-203ENST00000338252 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
CAST-203ENST00000338252 CLIP1P30622 1438 aa9.43□□□□□ -0.9
CAST-203ENST00000338252 VPS8Q8N3P4 1428 aa9.43□□□□□ -0.9
CAST-203ENST00000338252 PPP1R15AO75807 674 aaPredicted RBP9.43□□□□□ -0.9
CAST-203ENST00000338252 UBTFP17480 764 aaKnown RBP9.42□□□□□ -0.9
CAST-203ENST00000338252 RUSC2Q8N2Y8 1516 aa9.41□□□□□ -0.9
CAST-203ENST00000338252 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
CAST-203ENST00000338252 DDX10Q13206 875 aaKnown RBP9.4□□□□□ -0.9
CAST-203ENST00000338252 WASHC2AQ641Q2 1341 aa9.39□□□□□ -0.91
CAST-203ENST00000338252 CHMP7Q8WUX9 453 aaPredicted RBP9.39□□□□□ -0.91
CAST-203ENST00000338252 C11orf95C9JLR9 678 aaPredicted RBP9.38□□□□□ -0.91
CAST-203ENST00000338252 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
CAST-203ENST00000338252 IRX6P78412 446 aaPredicted RBP9.37□□□□□ -0.91
CAST-203ENST00000338252 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
CAST-203ENST00000338252 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
CAST-203ENST00000338252 PKNOX2Q96KN3 472 aa9.36□□□□□ -0.91
CAST-203ENST00000338252 MAPKBP1O60336 1514 aa9.36□□□□□ -0.91
CAST-203ENST00000338252 KIF21BO75037 1637 aa9.35□□□□□ -0.91
CAST-203ENST00000338252 EIF5BO60841 1220 aaKnown RBP9.35□□□□□ -0.91
CAST-203ENST00000338252 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
CAST-203ENST00000338252 IPO9Q96P70 1041 aaKnown RBP9.34□□□□□ -0.91
CAST-203ENST00000338252 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
CAST-203ENST00000338252 CLASP1Q7Z460 1538 aa9.34□□□□□ -0.91
CAST-203ENST00000338252 WASHC2CQ9Y4E1 1318 aa9.34□□□□□ -0.91
CAST-203ENST00000338252 ANP32CO43423 234 aa9.33□□□□□ -0.92
CAST-203ENST00000338252 TDRD9Q8NDG6 1382 aaKnown RBP9.33□□□□□ -0.92
CAST-203ENST00000338252 RRBP1Q9P2E9 1410 aaKnown RBP9.33□□□□□ -0.92
CAST-203ENST00000338252 SYNJ1O43426 1573 aa9.33□□□□□ -0.92
CAST-203ENST00000338252 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
CAST-203ENST00000338252 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
CAST-203ENST00000338252 TOP2AP11388 1531 aaKnown RBP9.31□□□□□ -0.92
CAST-203ENST00000338252 PRDM2Q13029 1718 aa9.31□□□□□ -0.92
CAST-203ENST00000338252 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
CAST-203ENST00000338252 SNAPC4Q5SXM2 1469 aa9.3□□□□□ -0.92
CAST-203ENST00000338252 POLA1P09884 1462 aaPredicted RBP9.29□□□□□ -0.92
CAST-203ENST00000338252 B4GALNT3Q6L9W6 998 aa9.29□□□□□ -0.92
CAST-203ENST00000338252 USP35Q9P2H5 1018 aa9.29□□□□□ -0.92
CAST-203ENST00000338252 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
CAST-203ENST00000338252 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
CAST-203ENST00000338252 ANP32AP39687 249 aaKnown RBP9.27□□□□□ -0.92
CAST-203ENST00000338252 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.92
CAST-203ENST00000338252 MAGI1Q96QZ7 1491 aaPredicted RBP9.26□□□□□ -0.93
CAST-203ENST00000338252 BRPF3Q9ULD4 1205 aa9.24□□□□□ -0.93
CAST-203ENST00000338252 SYNJ2O15056 1496 aa9.24□□□□□ -0.93
CAST-203ENST00000338252 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
CAST-203ENST00000338252 RSPH6AQ9H0K4 717 aa9.23□□□□□ -0.93
CAST-203ENST00000338252 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
CAST-203ENST00000338252 GRIN2BQ13224 1484 aa9.22□□□□□ -0.93
CAST-203ENST00000338252 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
CAST-203ENST00000338252 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
CAST-203ENST00000338252 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
CAST-203ENST00000338252 NEFMP07197 916 aa9.21□□□□□ -0.93
CAST-203ENST00000338252 HIRIP3Q9BW71 556 aaPredicted RBP9.21□□□□□ -0.94
CAST-203ENST00000338252 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.94
CAST-203ENST00000338252 SIN3AQ96ST3 1273 aa9.19□□□□□ -0.94
CAST-203ENST00000338252 KIF13AQ9H1H9 1805 aa9.18□□□□□ -0.94
CAST-203ENST00000338252 ERCC6L2Q5T890 1561 aa9.18□□□□□ -0.94
CAST-203ENST00000338252 GSE1Q14687 1217 aa9.17□□□□□ -0.94
CAST-203ENST00000338252 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
CAST-203ENST00000338252 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
CAST-203ENST00000338252 FGD5Q6ZNL6 1462 aa9.16□□□□□ -0.94
CAST-203ENST00000338252 ZBED9Q6R2W3 1325 aa9.16□□□□□ -0.94
CAST-203ENST00000338252 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
CAST-203ENST00000338252 LAS1LQ9Y4W2 734 aaKnown RBP9.16□□□□□ -0.94
CAST-203ENST00000338252 SETD5Q9C0A6 1442 aa9.16□□□□□ -0.94
CAST-203ENST00000338252 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms