RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
SREK1-202ENST00000334121 RGL3Q3MIN7 710 aa14.98□□□□□ -0.01
SREK1-202ENST00000334121 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
SREK1-202ENST00000334121 CDK11BP21127 795 aaKnown RBP14.94□□□□□ -0.02
SREK1-202ENST00000334121 NPHP1O15259 732 aa14.93□□□□□ -0.02
SREK1-202ENST00000334121 CCDC136Q96JN2 1154 aa14.93□□□□□ -0.02
SREK1-202ENST00000334121 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
SREK1-202ENST00000334121 LAS1LQ9Y4W2 734 aaKnown RBP14.92□□□□□ -0.02
SREK1-202ENST00000334121 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
SREK1-202ENST00000334121 TSPY4P0CV99 314 aa14.89□□□□□ -0.03
SREK1-202ENST00000334121 TSPY10P0CW01 314 aa14.89□□□□□ -0.03
SREK1-202ENST00000334121 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.88□□□□□ -0.03
SREK1-202ENST00000334121 MRS2Q9HD23 443 aa14.88□□□□□ -0.03
SREK1-202ENST00000334121 SOX12O15370 315 aa14.87□□□□□ -0.03
SREK1-202ENST00000334121 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
SREK1-202ENST00000334121 TNNT2P45379 298 aaPredicted RBP14.87□□□□□ -0.03
SREK1-202ENST00000334121 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
SREK1-202ENST00000334121 SCRIBQ14160 1630 aa14.87□□□□□ -0.03
SREK1-202ENST00000334121 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
SREK1-202ENST00000334121 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.03
SREK1-202ENST00000334121 MLECQ14165 292 aa14.83□□□□□ -0.04
SREK1-202ENST00000334121 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
SREK1-202ENST00000334121 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
SREK1-202ENST00000334121 NAP1L2Q9ULW6 460 aaPredicted RBP14.74□□□□□ -0.05
SREK1-202ENST00000334121 SAFB2Q14151 953 aaKnown RBP eCLIP14.71□□□□□ -0.05
SREK1-202ENST00000334121 CLSTN1O94985 981 aa14.69□□□□□ -0.06
SREK1-202ENST00000334121 ISY1Q9ULR0 285 aaKnown RBP14.69□□□□□ -0.06
SREK1-202ENST00000334121 PLCB2Q00722 1185 aa14.67□□□□□ -0.06
SREK1-202ENST00000334121 POGKQ9P215 609 aa14.67□□□□□ -0.06
SREK1-202ENST00000334121 MIER1Q8N108 512 aa14.66□□□□□ -0.06
SREK1-202ENST00000334121 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
SREK1-202ENST00000334121 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
SREK1-202ENST00000334121 FTSJ3Q8IY81 847 aaKnown RBP14.65□□□□□ -0.06
SREK1-202ENST00000334121 U2SURPO15042 1029 aaKnown RBP14.64□□□□□ -0.07
SREK1-202ENST00000334121 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
SREK1-202ENST00000334121 ZNF330Q9Y3S2 320 aaPredicted RBP14.63□□□□□ -0.07
SREK1-202ENST00000334121 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
SREK1-202ENST00000334121 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
SREK1-202ENST00000334121 ZRSR1Q15695 479 aaKnown RBP14.62□□□□□ -0.07
SREK1-202ENST00000334121 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.62□□□□□ -0.07
SREK1-202ENST00000334121 EIF4G2P78344 907 aaKnown RBP eCLIP14.61□□□□□ -0.07
SREK1-202ENST00000334121 PTMAP06454 111 aaKnown RBP14.59□□□□□ -0.07
SREK1-202ENST00000334121 RGS3P49796 1198 aa14.59□□□□□ -0.07
SREK1-202ENST00000334121 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
SREK1-202ENST00000334121 FGD1P98174 961 aa14.58□□□□□ -0.08
SREK1-202ENST00000334121 DNTTIP2Q5QJE6 756 aaKnown RBP14.58□□□□□ -0.08
SREK1-202ENST00000334121 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
SREK1-202ENST00000334121 STK26Q9P289 416 aa14.56□□□□□ -0.08
SREK1-202ENST00000334121 SPRYD3Q8NCJ5 442 aa14.56□□□□□ -0.08
SREK1-202ENST00000334121 TRIM44Q96DX7 344 aaPredicted RBP14.56□□□□□ -0.08
SREK1-202ENST00000334121 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
SREK1-202ENST00000334121 MAPK8IP3Q9UPT6 1336 aa14.56□□□□□ -0.08
SREK1-202ENST00000334121 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
SREK1-202ENST00000334121 APBB1O00213 710 aa14.55□□□□□ -0.08
SREK1-202ENST00000334121 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
SREK1-202ENST00000334121 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
SREK1-202ENST00000334121 KCNJ4P48050 445 aa14.55□□□□□ -0.08
SREK1-202ENST00000334121 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
SREK1-202ENST00000334121 CFDP1Q9UEE9 299 aaPredicted RBP14.54□□□□□ -0.08
SREK1-202ENST00000334121 SUPT16HQ9Y5B9 1047 aaKnown RBP14.53□□□□□ -0.08
SREK1-202ENST00000334121 CASC1Q6TDU7 716 aa14.52□□□□□ -0.09
SREK1-202ENST00000334121 BECN1Q14457 450 aa14.51□□□□□ -0.09
SREK1-202ENST00000334121 SRPK2P78362 688 aaKnown RBP14.49□□□□□ -0.09
SREK1-202ENST00000334121 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
SREK1-202ENST00000334121 SIN3AQ96ST3 1273 aa14.49□□□□□ -0.09
SREK1-202ENST00000334121 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
SREK1-202ENST00000334121 GOLGA6L22H0YM25 854 aa14.47□□□□□ -0.09
SREK1-202ENST00000334121 PDE4CQ08493 712 aa14.47□□□□□ -0.09
SREK1-202ENST00000334121 GGT6Q6P531 493 aa14.46□□□□□ -0.1
SREK1-202ENST00000334121 GLIPR1L2Q4G1C9 344 aa14.45□□□□□ -0.1
SREK1-202ENST00000334121 ERICH6BQ5W0A0 696 aa14.45□□□□□ -0.1
SREK1-202ENST00000334121 NUTM2DQ5VT03 806 aaPredicted RBP14.44□□□□□ -0.1
SREK1-202ENST00000334121 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
SREK1-202ENST00000334121 HSP90AB1P08238 724 aaKnown RBP14.42□□□□□ -0.1
SREK1-202ENST00000334121 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
SREK1-202ENST00000334121 NUDCQ9Y266 331 aa14.42□□□□□ -0.1
SREK1-202ENST00000334121 DCAF11Q8TEB1 546 aa14.41□□□□□ -0.1
SREK1-202ENST00000334121 CLIP1P30622 1438 aa14.4□□□□□ -0.1
SREK1-202ENST00000334121 FOXD1Q16676 465 aa14.39□□□□□ -0.11
SREK1-202ENST00000334121 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
SREK1-202ENST00000334121 PRM3Q9NNZ6 103 aa14.38□□□□□ -0.11
SREK1-202ENST00000334121 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
SREK1-202ENST00000334121 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
SREK1-202ENST00000334121 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
SREK1-202ENST00000334121 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
SREK1-202ENST00000334121 CDCA8Q53HL2 280 aa14.34□□□□□ -0.11
SREK1-202ENST00000334121 ARID3AQ99856 593 aa14.34□□□□□ -0.11
SREK1-202ENST00000334121 RTF1Q92541 710 aaKnown RBP14.34□□□□□ -0.11
SREK1-202ENST00000334121 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
SREK1-202ENST00000334121 LTV1Q96GA3 475 aaPredicted RBP14.33□□□□□ -0.12
SREK1-202ENST00000334121 GOLGA6L4A6NEF3 574 aa14.32□□□□□ -0.12
SREK1-202ENST00000334121 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
SREK1-202ENST00000334121 DRC7Q8IY82 874 aa14.3□□□□□ -0.12
SREK1-202ENST00000334121 G3V3G9 751 aa14.29□□□□□ -0.12
SREK1-202ENST00000334121 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
SREK1-202ENST00000334121 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
SREK1-202ENST00000334121 MSH5O43196 834 aa14.27□□□□□ -0.12
SREK1-202ENST00000334121 CREBRFQ8IUR6 639 aa14.26□□□□□ -0.13
SREK1-202ENST00000334121 WWC1Q8IX03 1113 aa14.26□□□□□ -0.13
SREK1-202ENST00000334121 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms