RNA–Protein interactions for RNA: ENST00000333039.2

NPTXR-201, Transcript of neuronal pentraxin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPTXR, Length 5,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTXR-201ENST00000333039 CEP162Q5TB80 1403 aa29.19■■■□□ 2.26
NPTXR-201ENST00000333039 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
NPTXR-201ENST00000333039 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
NPTXR-201ENST00000333039 EEA1Q15075 1411 aa29.16■■■□□ 2.26
NPTXR-201ENST00000333039 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.26
NPTXR-201ENST00000333039 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
NPTXR-201ENST00000333039 MYH16Q9H6N6 1097 aa29.08■■■□□ 2.25
NPTXR-201ENST00000333039 ARXQ96QS3 562 aa29.05■■■□□ 2.24
NPTXR-201ENST00000333039 KCNH8Q96L42 1107 aa29.02■■■□□ 2.24
NPTXR-201ENST00000333039 PLEKHD1A6NEE1 506 aa29.01■■■□□ 2.23
NPTXR-201ENST00000333039 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
NPTXR-201ENST00000333039 SENP3Q9H4L4 574 aaPredicted RBP28.98■■■□□ 2.23
NPTXR-201ENST00000333039 RGL3Q3MIN7 710 aa28.95■■■□□ 2.22
NPTXR-201ENST00000333039 PPP1R15AO75807 674 aaPredicted RBP28.93■■■□□ 2.22
NPTXR-201ENST00000333039 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
NPTXR-201ENST00000333039 ZBTB7CA1YPR0 619 aa28.9■■■□□ 2.22
NPTXR-201ENST00000333039 TNIKQ9UKE5 1360 aa28.9■■■□□ 2.22
NPTXR-201ENST00000333039 DDRGK1Q96HY6 314 aa28.89■■■□□ 2.22
NPTXR-201ENST00000333039 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
NPTXR-201ENST00000333039 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
NPTXR-201ENST00000333039 CFDP1Q9UEE9 299 aaPredicted RBP28.86■■■□□ 2.21
NPTXR-201ENST00000333039 BECN1Q14457 450 aa28.85■■■□□ 2.21
NPTXR-201ENST00000333039 C14orf37Q86TY3 774 aa28.85■■■□□ 2.21
NPTXR-201ENST00000333039 CFAP53Q96M91 514 aa28.83■■■□□ 2.21
NPTXR-201ENST00000333039 KNSTRNQ9Y448 316 aa28.82■■■□□ 2.2
NPTXR-201ENST00000333039 CDCA8Q53HL2 280 aa28.82■■■□□ 2.2
NPTXR-201ENST00000333039 CARD11Q9BXL7 1154 aa28.81■■■□□ 2.2
NPTXR-201ENST00000333039 SENP3-EIF4A1A0A087X0R7 540 aa28.8■■■□□ 2.2
NPTXR-201ENST00000333039 GLIPR1L2Q4G1C9 344 aa28.8■■■□□ 2.2
NPTXR-201ENST00000333039 PLEKHG5O94827 1062 aa28.79■■■□□ 2.2
NPTXR-201ENST00000333039 A0A0G2JS52 829 aa28.77■■■□□ 2.2
NPTXR-201ENST00000333039 NACADO15069 1562 aa28.76■■■□□ 2.19
NPTXR-201ENST00000333039 SUPT16HQ9Y5B9 1047 aaKnown RBP28.74■■■□□ 2.19
NPTXR-201ENST00000333039 SIN3AQ96ST3 1273 aa28.69■■■□□ 2.18
NPTXR-201ENST00000333039 NCLP19338 710 aaKnown RBP28.69■■■□□ 2.18
NPTXR-201ENST00000333039 PPM1GO15355 546 aaPredicted RBP28.66■■■□□ 2.18
NPTXR-201ENST00000333039 FTSJ3Q8IY81 847 aaKnown RBP28.65■■■□□ 2.18
NPTXR-201ENST00000333039 GOLGA6L22H0YM25 854 aa28.64■■■□□ 2.17
NPTXR-201ENST00000333039 ANP32EQ9BTT0 268 aa28.61■■■□□ 2.17
NPTXR-201ENST00000333039 NEUROD2Q15784 382 aa28.59■■■□□ 2.17
NPTXR-201ENST00000333039 CASC1Q6TDU7 716 aa28.58■■■□□ 2.17
NPTXR-201ENST00000333039 MAPK8IP3Q9UPT6 1336 aa28.58■■■□□ 2.17
NPTXR-201ENST00000333039 ARID4BQ4LE39 1312 aaPredicted RBP28.58■■■□□ 2.17
NPTXR-201ENST00000333039 TRIM44Q96DX7 344 aaPredicted RBP28.58■■■□□ 2.17
NPTXR-201ENST00000333039 LAS1LQ9Y4W2 734 aaKnown RBP28.56■■■□□ 2.16
NPTXR-201ENST00000333039 PPP4R2Q9NY27 417 aa28.54■■■□□ 2.16
NPTXR-201ENST00000333039 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
NPTXR-201ENST00000333039 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
NPTXR-201ENST00000333039 NUDCQ9Y266 331 aa28.53■■■□□ 2.16
NPTXR-201ENST00000333039 CC2D1BQ5T0F9 858 aaKnown RBP28.52■■■□□ 2.16
NPTXR-201ENST00000333039 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
NPTXR-201ENST00000333039 CDK11BP21127 795 aaKnown RBP28.5■■■□□ 2.15
NPTXR-201ENST00000333039 POGKQ9P215 609 aa28.5■■■□□ 2.15
NPTXR-201ENST00000333039 HAP1P54257 671 aaPredicted RBP28.47■■■□□ 2.15
NPTXR-201ENST00000333039 TNNT2P45379 298 aaPredicted RBP28.46■■■□□ 2.15
NPTXR-201ENST00000333039 FRAT1Q92837 279 aaPredicted RBP28.46■■■□□ 2.15
NPTXR-201ENST00000333039 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
NPTXR-201ENST00000333039 ERCC6Q03468 1493 aa28.45■■■□□ 2.15
NPTXR-201ENST00000333039 RGS3P49796 1198 aa28.43■■■□□ 2.14
NPTXR-201ENST00000333039 CARMIL1Q5VZK9 1371 aa28.39■■■□□ 2.14
NPTXR-201ENST00000333039 TMF1P82094 1093 aa28.39■■■□□ 2.13
NPTXR-201ENST00000333039 DCAF11Q8TEB1 546 aa28.39■■■□□ 2.13
NPTXR-201ENST00000333039 SOGA1O94964 1423 aa28.38■■■□□ 2.13
NPTXR-201ENST00000333039 PTMAP06454 111 aaKnown RBP28.37■■■□□ 2.13
NPTXR-201ENST00000333039 CUX2O14529 1486 aa28.37■■■□□ 2.13
NPTXR-201ENST00000333039 ZRSR1Q15695 479 aaKnown RBP28.36■■■□□ 2.13
NPTXR-201ENST00000333039 TPRNQ4KMQ1 711 aa28.36■■■□□ 2.13
NPTXR-201ENST00000333039 U2SURPO15042 1029 aaKnown RBP28.35■■■□□ 2.13
NPTXR-201ENST00000333039 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
NPTXR-201ENST00000333039 CHMP4BQ9H444 224 aaKnown RBP28.34■■■□□ 2.13
NPTXR-201ENST00000333039 MS4A1P11836 297 aa28.33■■■□□ 2.13
NPTXR-201ENST00000333039 KANK1Q14678 1352 aa28.32■■■□□ 2.12
NPTXR-201ENST00000333039 NOP58Q9Y2X3 529 aaKnown RBP28.31■■■□□ 2.12
NPTXR-201ENST00000333039 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
NPTXR-201ENST00000333039 TIMELESSQ9UNS1 1208 aa28.3■■■□□ 2.12
NPTXR-201ENST00000333039 B4GALNT3Q6L9W6 998 aa28.3■■■□□ 2.12
NPTXR-201ENST00000333039 SETD5Q9C0A6 1442 aa28.3■■■□□ 2.12
NPTXR-201ENST00000333039 LMOD2Q6P5Q4 547 aa28.29■■■□□ 2.12
NPTXR-201ENST00000333039 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
NPTXR-201ENST00000333039 HSP90AB1P08238 724 aaKnown RBP28.24■■■□□ 2.11
NPTXR-201ENST00000333039 CCER2I3L3R5 266 aa28.24■■■□□ 2.11
NPTXR-201ENST00000333039 HSPA5P11021 654 aaKnown RBP28.23■■■□□ 2.11
NPTXR-201ENST00000333039 OS9Q13438 667 aaPredicted RBP28.22■■■□□ 2.11
NPTXR-201ENST00000333039 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
NPTXR-201ENST00000333039 DNTTIP2Q5QJE6 756 aaKnown RBP28.2■■■□□ 2.11
NPTXR-201ENST00000333039 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
NPTXR-201ENST00000333039 SRPK2P78362 688 aaKnown RBP28.16■■■□□ 2.1
NPTXR-201ENST00000333039 ERICH6BQ5W0A0 696 aa28.15■■■□□ 2.1
NPTXR-201ENST00000333039 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
NPTXR-201ENST00000333039 PKD2Q13563 968 aa28.11■■■□□ 2.09
NPTXR-201ENST00000333039 KANK4Q5T7N3 995 aaPredicted RBP28.11■■■□□ 2.09
NPTXR-201ENST00000333039 KTN1Q86UP2 1357 aaKnown RBP28.1■■■□□ 2.09
NPTXR-201ENST00000333039 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
NPTXR-201ENST00000333039 KCNJ4P48050 445 aa28.09■■■□□ 2.09
NPTXR-201ENST00000333039 FGD1P98174 961 aa28.09■■■□□ 2.09
NPTXR-201ENST00000333039 HSCBQ8IWL3 235 aa28.09■■■□□ 2.09
NPTXR-201ENST00000333039 TAOK2Q9UL54 1235 aa28.09■■■□□ 2.09
NPTXR-201ENST00000333039 FOXD1Q16676 465 aa28.08■■■□□ 2.09
NPTXR-201ENST00000333039 PLCB2Q00722 1185 aa28.08■■■□□ 2.09
NPTXR-201ENST00000333039 SAFB2Q14151 953 aaKnown RBP eCLIP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms