RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
ZKSCAN1-201ENST00000324306 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
ZKSCAN1-201ENST00000324306 DNTTIP2Q5QJE6 756 aaKnown RBP12.29□□□□□ -0.44
ZKSCAN1-201ENST00000324306 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
ZKSCAN1-201ENST00000324306 NRDCO43847 1150 aa12.28□□□□□ -0.44
ZKSCAN1-201ENST00000324306 EIF4G2P78344 907 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZKSCAN1-201ENST00000324306 SUPT16HQ9Y5B9 1047 aaKnown RBP12.26□□□□□ -0.45
ZKSCAN1-201ENST00000324306 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
ZKSCAN1-201ENST00000324306 ABCC9O60706 1549 aa12.25□□□□□ -0.45
ZKSCAN1-201ENST00000324306 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
ZKSCAN1-201ENST00000324306 DEKP35659 375 aaKnown RBP12.24□□□□□ -0.45
ZKSCAN1-201ENST00000324306 MSNP26038 577 aaKnown RBP12.23□□□□□ -0.45
ZKSCAN1-201ENST00000324306 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
ZKSCAN1-201ENST00000324306 MS4A1P11836 297 aa12.22□□□□□ -0.45
ZKSCAN1-201ENST00000324306 ARID4BQ4LE39 1312 aaPredicted RBP12.21□□□□□ -0.45
ZKSCAN1-201ENST00000324306 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
ZKSCAN1-201ENST00000324306 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
ZKSCAN1-201ENST00000324306 CEP164Q9UPV0 1460 aa12.18□□□□□ -0.46
ZKSCAN1-201ENST00000324306 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
ZKSCAN1-201ENST00000324306 MTUS2Q5JR59 1369 aa12.17□□□□□ -0.46
ZKSCAN1-201ENST00000324306 RSPH6AQ9H0K4 717 aa12.17□□□□□ -0.46
ZKSCAN1-201ENST00000324306 IRX6P78412 446 aaPredicted RBP12.16□□□□□ -0.46
ZKSCAN1-201ENST00000324306 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
ZKSCAN1-201ENST00000324306 HSCBQ8IWL3 235 aa12.15□□□□□ -0.46
ZKSCAN1-201ENST00000324306 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-201ENST00000324306 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-201ENST00000324306 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
ZKSCAN1-201ENST00000324306 CFAP53Q96M91 514 aa12.13□□□□□ -0.47
ZKSCAN1-201ENST00000324306 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
ZKSCAN1-201ENST00000324306 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
ZKSCAN1-201ENST00000324306 HSP90AB1P08238 724 aaKnown RBP12.11□□□□□ -0.47
ZKSCAN1-201ENST00000324306 RB1CC1Q8TDY2 1594 aa12.11□□□□□ -0.47
ZKSCAN1-201ENST00000324306 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
ZKSCAN1-201ENST00000324306 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
ZKSCAN1-201ENST00000324306 GBP4Q96PP9 640 aa12.1□□□□□ -0.47
ZKSCAN1-201ENST00000324306 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
ZKSCAN1-201ENST00000324306 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
ZKSCAN1-201ENST00000324306 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
ZKSCAN1-201ENST00000324306 SALL2Q9Y467 1007 aaPredicted RBP12.08□□□□□ -0.48
ZKSCAN1-201ENST00000324306 SYAP1Q96A49 352 aaPredicted RBP12.07□□□□□ -0.48
ZKSCAN1-201ENST00000324306 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
ZKSCAN1-201ENST00000324306 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
ZKSCAN1-201ENST00000324306 MCCP23508 829 aa12.05□□□□□ -0.48
ZKSCAN1-201ENST00000324306 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
ZKSCAN1-201ENST00000324306 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
ZKSCAN1-201ENST00000324306 TSPY4P0CV99 314 aa12.02□□□□□ -0.48
ZKSCAN1-201ENST00000324306 TSPY10P0CW01 314 aa12.02□□□□□ -0.48
ZKSCAN1-201ENST00000324306 IPO9Q96P70 1041 aaKnown RBP12.01□□□□□ -0.49
ZKSCAN1-201ENST00000324306 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
ZKSCAN1-201ENST00000324306 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
ZKSCAN1-201ENST00000324306 TNNT3P45378 269 aaPredicted RBP12□□□□□ -0.49
ZKSCAN1-201ENST00000324306 GOLGA6L4A6NEF3 574 aa11.99□□□□□ -0.49
ZKSCAN1-201ENST00000324306 HSP90AA2PQ14568 343 aaPredicted RBP11.99□□□□□ -0.49
ZKSCAN1-201ENST00000324306 PHF14O94880 888 aa11.99□□□□□ -0.49
ZKSCAN1-201ENST00000324306 MAPK8IP3Q9UPT6 1336 aa11.98□□□□□ -0.49
ZKSCAN1-201ENST00000324306 RGS3P49796 1198 aa11.97□□□□□ -0.49
ZKSCAN1-201ENST00000324306 FBLN2P98095 1184 aa11.97□□□□□ -0.49
ZKSCAN1-201ENST00000324306 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
ZKSCAN1-201ENST00000324306 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
ZKSCAN1-201ENST00000324306 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
ZKSCAN1-201ENST00000324306 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
ZKSCAN1-201ENST00000324306 DRC7Q8IY82 874 aa11.96□□□□□ -0.49
ZKSCAN1-201ENST00000324306 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
ZKSCAN1-201ENST00000324306 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.5
ZKSCAN1-201ENST00000324306 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
ZKSCAN1-201ENST00000324306 GOLGA6L1Q8N7Z2 621 aa11.95□□□□□ -0.5
ZKSCAN1-201ENST00000324306 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
ZKSCAN1-201ENST00000324306 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
ZKSCAN1-201ENST00000324306 CHIC2Q9UKJ5 165 aa11.94□□□□□ -0.5
ZKSCAN1-201ENST00000324306 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
ZKSCAN1-201ENST00000324306 KTN1Q86UP2 1357 aaKnown RBP11.93□□□□□ -0.5
ZKSCAN1-201ENST00000324306 SETQ01105 290 aaPredicted RBP11.93□□□□□ -0.5
ZKSCAN1-201ENST00000324306 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
ZKSCAN1-201ENST00000324306 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
ZKSCAN1-201ENST00000324306 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 ARHGAP35Q9NRY4 1499 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 NACADO15069 1562 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 SETD5Q9C0A6 1442 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 CARD11Q9BXL7 1154 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
ZKSCAN1-201ENST00000324306 ARID3CA6NKF2 412 aa11.91□□□□□ -0.5
ZKSCAN1-201ENST00000324306 TPM4P67936 248 aa11.91□□□□□ -0.5
ZKSCAN1-201ENST00000324306 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
ZKSCAN1-201ENST00000324306 SKOR2Q2VWA4 1001 aaPredicted RBP11.9□□□□□ -0.5
ZKSCAN1-201ENST00000324306 RALBP1Q15311 655 aa11.9□□□□□ -0.51
ZKSCAN1-201ENST00000324306 VPS8Q8N3P4 1428 aa11.89□□□□□ -0.51
ZKSCAN1-201ENST00000324306 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
ZKSCAN1-201ENST00000324306 MTERF4Q7Z6M4 381 aaKnown RBP11.88□□□□□ -0.51
ZKSCAN1-201ENST00000324306 IPO8O15397 1037 aaKnown RBP11.88□□□□□ -0.51
ZKSCAN1-201ENST00000324306 RWDD1Q9H446 243 aaPredicted RBP11.88□□□□□ -0.51
ZKSCAN1-201ENST00000324306 FGD1P98174 961 aa11.87□□□□□ -0.51
ZKSCAN1-201ENST00000324306 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
ZKSCAN1-201ENST00000324306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.515e-11■■□□□ 11.6
ZKSCAN1-201ENST00000324306 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
ZKSCAN1-201ENST00000324306 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
ZKSCAN1-201ENST00000324306 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
ZKSCAN1-201ENST00000324306 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
ZKSCAN1-201ENST00000324306 KCNJ4P48050 445 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms