RNA–Protein interactions for RNA: ENST00000305877.12

BCR-201, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCR, Length 7,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-201ENST00000305877 ISY1Q9ULR0 285 aaKnown RBP23.74■■□□□ 1.39
BCR-201ENST00000305877 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
BCR-201ENST00000305877 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.39
BCR-201ENST00000305877 HNRNPUQ00839 825 aaKnown RBP eCLIP23.64■■□□□ 1.37
BCR-201ENST00000305877 SOX12O15370 315 aa23.64■■□□□ 1.37
BCR-201ENST00000305877 FKBP8Q14318 412 aa23.63■■□□□ 1.37
BCR-201ENST00000305877 IRX6P78412 446 aaPredicted RBP23.63■■□□□ 1.37
BCR-201ENST00000305877 NAP1L2Q9ULW6 460 aaPredicted RBP23.61■■□□□ 1.37
BCR-201ENST00000305877 HIRIP3Q9BW71 556 aaPredicted RBP23.6■■□□□ 1.37
BCR-201ENST00000305877 PRM3Q9NNZ6 103 aa23.59■■□□□ 1.37
BCR-201ENST00000305877 MLECQ14165 292 aa23.58■■□□□ 1.36
BCR-201ENST00000305877 NCLP19338 710 aaKnown RBP23.57■■□□□ 1.36
BCR-201ENST00000305877 GOLGA2Q08379 1002 aa23.56■■□□□ 1.36
BCR-201ENST00000305877 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.56■■□□□ 1.36
BCR-201ENST00000305877 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
BCR-201ENST00000305877 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
BCR-201ENST00000305877 DDX10Q13206 875 aaKnown RBP23.53■■□□□ 1.36
BCR-201ENST00000305877 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
BCR-201ENST00000305877 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
BCR-201ENST00000305877 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
BCR-201ENST00000305877 CCDC9Q9Y3X0 531 aaKnown RBP23.47■■□□□ 1.35
BCR-201ENST00000305877 ZRSR1Q15695 479 aaKnown RBP23.46■■□□□ 1.35
BCR-201ENST00000305877 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
BCR-201ENST00000305877 CCDC136Q96JN2 1154 aa23.43■■□□□ 1.34
BCR-201ENST00000305877 ZNF330Q9Y3S2 320 aaPredicted RBP23.42■■□□□ 1.34
BCR-201ENST00000305877 PDE4CQ08493 712 aa23.39■■□□□ 1.34
BCR-201ENST00000305877 OS9Q13438 667 aaPredicted RBP23.39■■□□□ 1.33
BCR-201ENST00000305877 TSPY4P0CV99 314 aa23.39■■□□□ 1.33
BCR-201ENST00000305877 TSPY10P0CW01 314 aa23.39■■□□□ 1.33
BCR-201ENST00000305877 PLCB2Q00722 1185 aa23.37■■□□□ 1.33
BCR-201ENST00000305877 FGD1P98174 961 aa23.3■■□□□ 1.32
BCR-201ENST00000305877 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
BCR-201ENST00000305877 POGKQ9P215 609 aa23.27■■□□□ 1.32
BCR-201ENST00000305877 PTMAP06454 111 aaKnown RBP23.27■■□□□ 1.31
BCR-201ENST00000305877 ACIN1Q9UKV3 1341 aaKnown RBP23.26■■□□□ 1.31
BCR-201ENST00000305877 MRS2Q9HD23 443 aa23.25■■□□□ 1.31
BCR-201ENST00000305877 DNTTIP2Q5QJE6 756 aaKnown RBP23.24■■□□□ 1.31
BCR-201ENST00000305877 FBXO3Q9UK99 471 aa23.23■■□□□ 1.31
BCR-201ENST00000305877 SAFB2Q14151 953 aaKnown RBP eCLIP23.22■■□□□ 1.313e-7■■■□□ 16.4
BCR-201ENST00000305877 KRI1Q8N9T8 703 aaKnown RBP23.21■■□□□ 1.31
BCR-201ENST00000305877 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
BCR-201ENST00000305877 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
BCR-201ENST00000305877 KCNJ4P48050 445 aa23.2■■□□□ 1.3
BCR-201ENST00000305877 FTSJ3Q8IY81 847 aaKnown RBP23.2■■□□□ 1.3
BCR-201ENST00000305877 CASC1Q6TDU7 716 aa23.16■■□□□ 1.3
BCR-201ENST00000305877 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
BCR-201ENST00000305877 ERICH6BQ5W0A0 696 aa23.14■■□□□ 1.29
BCR-201ENST00000305877 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
BCR-201ENST00000305877 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
BCR-201ENST00000305877 TRIM44Q96DX7 344 aaPredicted RBP23.13■■□□□ 1.29
BCR-201ENST00000305877 G3V3G9 751 aa23.12■■□□□ 1.29
BCR-201ENST00000305877 DCAF8Q5TAQ9 597 aa23.12■■□□□ 1.29
BCR-201ENST00000305877 CSB-PGBD3P0DP91 1061 aa23.1■■□□□ 1.29
BCR-201ENST00000305877 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
BCR-201ENST00000305877 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
BCR-201ENST00000305877 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
BCR-201ENST00000305877 MSH5O43196 834 aa23.07■■□□□ 1.28
BCR-201ENST00000305877 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
BCR-201ENST00000305877 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
BCR-201ENST00000305877 WWC1Q8IX03 1113 aa23.04■■□□□ 1.28
BCR-201ENST00000305877 APBB1O00213 710 aa23.03■■□□□ 1.28
BCR-201ENST00000305877 GLIPR1L2Q4G1C9 344 aa23.03■■□□□ 1.28
BCR-201ENST00000305877 CC2D1BQ5T0F9 858 aaKnown RBP23.01■■□□□ 1.27
BCR-201ENST00000305877 STK26Q9P289 416 aa23■■□□□ 1.27
BCR-201ENST00000305877 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
BCR-201ENST00000305877 GOLGA6L22H0YM25 854 aa22.98■■□□□ 1.27
BCR-201ENST00000305877 SPRYD3Q8NCJ5 442 aa22.98■■□□□ 1.27
BCR-201ENST00000305877 GNL2Q13823 731 aaKnown RBP22.97■■□□□ 1.27
BCR-201ENST00000305877 KNSTRNQ9Y448 316 aa22.96■■□□□ 1.27
BCR-201ENST00000305877 CHMP3Q9Y3E7 222 aa22.96■■□□□ 1.27
BCR-201ENST00000305877 BECN1Q14457 450 aa22.95■■□□□ 1.26
BCR-201ENST00000305877 VPS53Q5VIR6 699 aa22.94■■□□□ 1.26
BCR-201ENST00000305877 PLEKHD1A6NEE1 506 aa22.92■■□□□ 1.26
BCR-201ENST00000305877 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
BCR-201ENST00000305877 RGS3P49796 1198 aa22.92■■□□□ 1.26
BCR-201ENST00000305877 SRPK2P78362 688 aaKnown RBP22.9■■□□□ 1.26
BCR-201ENST00000305877 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
BCR-201ENST00000305877 HSP90AB1P08238 724 aaKnown RBP22.86■■□□□ 1.25
BCR-201ENST00000305877 MEX3CQ5U5Q3 659 aaKnown RBP22.86■■□□□ 1.25
BCR-201ENST00000305877 CREBRFQ8IUR6 639 aa22.85■■□□□ 1.25
BCR-201ENST00000305877 NOC3LQ8WTT2 800 aaKnown RBP22.84■■□□□ 1.25
BCR-201ENST00000305877 RTN4Q9NQC3 1192 aaKnown RBP22.84■■□□□ 1.25
BCR-201ENST00000305877 DRC7Q8IY82 874 aa22.83■■□□□ 1.25
BCR-201ENST00000305877 EIF4G2P78344 907 aaKnown RBP eCLIP22.82■■□□□ 1.245e-9■■■□□ 14.9
BCR-201ENST00000305877 RAD21O60216 631 aa22.81■■□□□ 1.24
BCR-201ENST00000305877 GOLGA6L4A6NEF3 574 aa22.81■■□□□ 1.24
BCR-201ENST00000305877 CNKSR2Q8WXI2 1034 aa22.8■■□□□ 1.24
BCR-201ENST00000305877 GOLGA6L6A8MZA4 724 aa22.8■■□□□ 1.24
BCR-201ENST00000305877 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
BCR-201ENST00000305877 NUTM2FA1L443 756 aa22.79■■□□□ 1.24
BCR-201ENST00000305877 CARD11Q9BXL7 1154 aa22.78■■□□□ 1.24
BCR-201ENST00000305877 RTF1Q92541 710 aaKnown RBP22.78■■□□□ 1.24
BCR-201ENST00000305877 TAF7LQ5H9L4 462 aa22.77■■□□□ 1.24
BCR-201ENST00000305877 GGT6Q6P531 493 aa22.76■■□□□ 1.23
BCR-201ENST00000305877 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
BCR-201ENST00000305877 NUTM2DQ5VT03 806 aaPredicted RBP22.75■■□□□ 1.23
BCR-201ENST00000305877 FRAT2O75474 233 aaPredicted RBP22.74■■□□□ 1.23
BCR-201ENST00000305877 FBXW7Q969H0 707 aa22.74■■□□□ 1.23
BCR-201ENST00000305877 ARID3AQ99856 593 aa22.73■■□□□ 1.23
BCR-201ENST00000305877 HSP90B1P14625 803 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms