RNA–Protein interactions for RNA: ENST00000303843.7

REPS2-201, Transcript of RALBP1 associated Eps domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene REPS2, Length 7,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS2-201ENST00000303843 PLEKHD1A6NEE1 506 aa23.14■■□□□ 1.29
REPS2-201ENST00000303843 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
REPS2-201ENST00000303843 ANP32BQ92688 251 aaKnown RBP23.1■■□□□ 1.29
REPS2-201ENST00000303843 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.09■■□□□ 1.29
REPS2-201ENST00000303843 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
REPS2-201ENST00000303843 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
REPS2-201ENST00000303843 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
REPS2-201ENST00000303843 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
REPS2-201ENST00000303843 CCDC136Q96JN2 1154 aa22.99■■□□□ 1.27
REPS2-201ENST00000303843 MLECQ14165 292 aa22.99■■□□□ 1.27
REPS2-201ENST00000303843 NPHP1O15259 732 aa22.98■■□□□ 1.27
REPS2-201ENST00000303843 IRX6P78412 446 aaPredicted RBP22.96■■□□□ 1.27
REPS2-201ENST00000303843 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
REPS2-201ENST00000303843 TULP1O00294 542 aaPredicted RBP22.94■■□□□ 1.26
REPS2-201ENST00000303843 CFDP1Q9UEE9 299 aaPredicted RBP22.93■■□□□ 1.26
REPS2-201ENST00000303843 ACIN1Q9UKV3 1341 aaKnown RBP22.93■■□□□ 1.26
REPS2-201ENST00000303843 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
REPS2-201ENST00000303843 CLIP1P30622 1438 aa22.91■■□□□ 1.26
REPS2-201ENST00000303843 POGKQ9P215 609 aa22.89■■□□□ 1.25
REPS2-201ENST00000303843 EIF4G2P78344 907 aaKnown RBP eCLIP22.88■■□□□ 1.25
REPS2-201ENST00000303843 CDK11BP21127 795 aaKnown RBP22.87■■□□□ 1.25
REPS2-201ENST00000303843 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
REPS2-201ENST00000303843 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
REPS2-201ENST00000303843 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
REPS2-201ENST00000303843 TNNT2P45379 298 aaPredicted RBP22.84■■□□□ 1.25
REPS2-201ENST00000303843 TAOK2Q9UL54 1235 aa22.82■■□□□ 1.24
REPS2-201ENST00000303843 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
REPS2-201ENST00000303843 SOX12O15370 315 aa22.8■■□□□ 1.24
REPS2-201ENST00000303843 CFAP53Q96M91 514 aa22.8■■□□□ 1.24
REPS2-201ENST00000303843 NBR1Q14596 966 aa22.79■■□□□ 1.24
REPS2-201ENST00000303843 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
REPS2-201ENST00000303843 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
REPS2-201ENST00000303843 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
REPS2-201ENST00000303843 CARD11Q9BXL7 1154 aa22.74■■□□□ 1.23
REPS2-201ENST00000303843 EIF5BO60841 1220 aaKnown RBP22.72■■□□□ 1.23
REPS2-201ENST00000303843 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
REPS2-201ENST00000303843 MAPK8IP3Q9UPT6 1336 aa22.67■■□□□ 1.22
REPS2-201ENST00000303843 FTSJ3Q8IY81 847 aaKnown RBP22.67■■□□□ 1.22
REPS2-201ENST00000303843 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
REPS2-201ENST00000303843 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
REPS2-201ENST00000303843 U2SURPO15042 1029 aaKnown RBP22.64■■□□□ 1.22
REPS2-201ENST00000303843 KIF27Q86VH2 1401 aa22.64■■□□□ 1.21
REPS2-201ENST00000303843 CC2D1BQ5T0F9 858 aaKnown RBP22.62■■□□□ 1.21
REPS2-201ENST00000303843 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
REPS2-201ENST00000303843 MIER1Q8N108 512 aa22.59■■□□□ 1.21
REPS2-201ENST00000303843 GGT6Q6P531 493 aa22.58■■□□□ 1.21
REPS2-201ENST00000303843 OS9Q13438 667 aaPredicted RBP22.58■■□□□ 1.21
REPS2-201ENST00000303843 NUDCQ9Y266 331 aa22.58■■□□□ 1.2
REPS2-201ENST00000303843 GOLGA2Q08379 1002 aa22.57■■□□□ 1.2
REPS2-201ENST00000303843 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
REPS2-201ENST00000303843 NCLP19338 710 aaKnown RBP22.57■■□□□ 1.2
REPS2-201ENST00000303843 SRPK2P78362 688 aaKnown RBP22.56■■□□□ 1.2
REPS2-201ENST00000303843 STK26Q9P289 416 aa22.56■■□□□ 1.2
REPS2-201ENST00000303843 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
REPS2-201ENST00000303843 CASC1Q6TDU7 716 aa22.54■■□□□ 1.2
REPS2-201ENST00000303843 FRAT1Q92837 279 aaPredicted RBP22.54■■□□□ 1.2
REPS2-201ENST00000303843 KANK1Q14678 1352 aa22.53■■□□□ 1.2
REPS2-201ENST00000303843 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
REPS2-201ENST00000303843 PAK3O75914 559 aaPredicted RBP22.53■■□□□ 1.2
REPS2-201ENST00000303843 NACADO15069 1562 aa22.52■■□□□ 1.19
REPS2-201ENST00000303843 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
REPS2-201ENST00000303843 NAP1L2Q9ULW6 460 aaPredicted RBP22.5■■□□□ 1.19
REPS2-201ENST00000303843 DCAF11Q8TEB1 546 aa22.49■■□□□ 1.19
REPS2-201ENST00000303843 ZRSR1Q15695 479 aaKnown RBP22.48■■□□□ 1.19
REPS2-201ENST00000303843 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
REPS2-201ENST00000303843 BECN1Q14457 450 aa22.46■■□□□ 1.19
REPS2-201ENST00000303843 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
REPS2-201ENST00000303843 ZNF330Q9Y3S2 320 aaPredicted RBP22.43■■□□□ 1.18
REPS2-201ENST00000303843 ISY1Q9ULR0 285 aaKnown RBP22.43■■□□□ 1.18
REPS2-201ENST00000303843 FGD1P98174 961 aa22.42■■□□□ 1.18
REPS2-201ENST00000303843 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
REPS2-201ENST00000303843 CSB-PGBD3P0DP91 1061 aa22.4■■□□□ 1.18
REPS2-201ENST00000303843 KCNJ4P48050 445 aa22.39■■□□□ 1.18
REPS2-201ENST00000303843 EEA1Q15075 1411 aa22.39■■□□□ 1.17
REPS2-201ENST00000303843 CUX2O14529 1486 aa22.38■■□□□ 1.17
REPS2-201ENST00000303843 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
REPS2-201ENST00000303843 GOLGA6L22H0YM25 854 aa22.36■■□□□ 1.17
REPS2-201ENST00000303843 RGS3P49796 1198 aa22.35■■□□□ 1.17
REPS2-201ENST00000303843 TMF1P82094 1093 aa22.35■■□□□ 1.17
REPS2-201ENST00000303843 SUPT16HQ9Y5B9 1047 aaKnown RBP22.34■■□□□ 1.17
REPS2-201ENST00000303843 PNNQ9H307 717 aaKnown RBP22.33■■□□□ 1.17
REPS2-201ENST00000303843 CLSTN1O94985 981 aa22.33■■□□□ 1.16
REPS2-201ENST00000303843 RTF1Q92541 710 aaKnown RBP22.33■■□□□ 1.16
REPS2-201ENST00000303843 MORC1Q86VD1 984 aa22.32■■□□□ 1.16
REPS2-201ENST00000303843 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
REPS2-201ENST00000303843 DDRGK1Q96HY6 314 aa22.31■■□□□ 1.16
REPS2-201ENST00000303843 FOXD1Q16676 465 aa22.29■■□□□ 1.16
REPS2-201ENST00000303843 NUTM2DQ5VT03 806 aaPredicted RBP22.28■■□□□ 1.16
REPS2-201ENST00000303843 PTMAP06454 111 aaKnown RBP22.28■■□□□ 1.16
REPS2-201ENST00000303843 TRIM44Q96DX7 344 aaPredicted RBP22.27■■□□□ 1.16
REPS2-201ENST00000303843 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
REPS2-201ENST00000303843 PLCB2Q00722 1185 aa22.26■■□□□ 1.15
REPS2-201ENST00000303843 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
REPS2-201ENST00000303843 HDGFL2Q7Z4V5 671 aaPredicted RBP22.24■■□□□ 1.15
REPS2-201ENST00000303843 APBB1O00213 710 aa22.23■■□□□ 1.15
REPS2-201ENST00000303843 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
REPS2-201ENST00000303843 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
REPS2-201ENST00000303843 NUTM2FA1L443 756 aa22.2■■□□□ 1.14
REPS2-201ENST00000303843 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
REPS2-201ENST00000303843 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms