RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 RRP7BPQ9NSQ0 103 aa28.17■■■□□ 2.1
LETM1-201ENST00000302787 EIF5BO60841 1220 aaKnown RBP28.12■■■□□ 2.09
LETM1-201ENST00000302787 NPM1P06748 294 aaKnown RBP eCLIP28.11■■■□□ 2.09
LETM1-201ENST00000302787 WRNQ14191 1432 aaPredicted RBP eCLIP28.1■■■□□ 2.09
LETM1-201ENST00000302787 TNIKQ9UKE5 1360 aa28.1■■■□□ 2.09
LETM1-201ENST00000302787 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
LETM1-201ENST00000302787 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
LETM1-201ENST00000302787 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
LETM1-201ENST00000302787 KIF27Q86VH2 1401 aa27.91■■■□□ 2.06
LETM1-201ENST00000302787 PLPPR3Q6T4P5 718 aa27.9■■■□□ 2.06
LETM1-201ENST00000302787 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.05
LETM1-201ENST00000302787 ARXQ96QS3 562 aa27.87■■■□□ 2.05
LETM1-201ENST00000302787 NACADO15069 1562 aa27.85■■■□□ 2.05
LETM1-201ENST00000302787 SUPT16HQ9Y5B9 1047 aaKnown RBP27.83■■■□□ 2.05
LETM1-201ENST00000302787 PLEKHD1A6NEE1 506 aa27.83■■■□□ 2.05
LETM1-201ENST00000302787 DDRGK1Q96HY6 314 aa27.8■■■□□ 2.04
LETM1-201ENST00000302787 RGL3Q3MIN7 710 aa27.8■■■□□ 2.04
LETM1-201ENST00000302787 SIN3AQ96ST3 1273 aa27.79■■■□□ 2.04
LETM1-201ENST00000302787 MYH16Q9H6N6 1097 aa27.78■■■□□ 2.04
LETM1-201ENST00000302787 SENP3-EIF4A1A0A087X0R7 540 aa27.77■■■□□ 2.04
LETM1-201ENST00000302787 KCNH8Q96L42 1107 aa27.75■■■□□ 2.03
LETM1-201ENST00000302787 CFDP1Q9UEE9 299 aaPredicted RBP27.75■■■□□ 2.03
LETM1-201ENST00000302787 CARD11Q9BXL7 1154 aa27.72■■■□□ 2.03
LETM1-201ENST00000302787 BECN1Q14457 450 aa27.71■■■□□ 2.03
LETM1-201ENST00000302787 ANP32EQ9BTT0 268 aa27.69■■■□□ 2.02
LETM1-201ENST00000302787 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
LETM1-201ENST00000302787 KNSTRNQ9Y448 316 aa27.68■■■□□ 2.02
LETM1-201ENST00000302787 GLIPR1L2Q4G1C9 344 aa27.67■■■□□ 2.02
LETM1-201ENST00000302787 CDCA8Q53HL2 280 aa27.66■■■□□ 2.02
LETM1-201ENST00000302787 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
LETM1-201ENST00000302787 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
LETM1-201ENST00000302787 PPP4R2Q9NY27 417 aa27.63■■■□□ 2.01
LETM1-201ENST00000302787 CFAP53Q96M91 514 aa27.61■■■□□ 2.01
LETM1-201ENST00000302787 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
LETM1-201ENST00000302787 SOGA1O94964 1423 aa27.6■■■□□ 2.01
LETM1-201ENST00000302787 PPP1R15AO75807 674 aaPredicted RBP27.55■■■□□ 2
LETM1-201ENST00000302787 FHAD1B1AJZ9 1412 aa27.55■■■□□ 2
LETM1-201ENST00000302787 PPM1GO15355 546 aaPredicted RBP27.47■■□□□ 1.99
LETM1-201ENST00000302787 TIMELESSQ9UNS1 1208 aa27.47■■□□□ 1.99
LETM1-201ENST00000302787 FTSJ3Q8IY81 847 aaKnown RBP27.46■■□□□ 1.99
LETM1-201ENST00000302787 GOLGA6L22H0YM25 854 aa27.45■■□□□ 1.99
LETM1-201ENST00000302787 NEUROD2Q15784 382 aa27.45■■□□□ 1.98
LETM1-201ENST00000302787 CARMIL1Q5VZK9 1371 aa27.44■■□□□ 1.98
LETM1-201ENST00000302787 ZBTB7CA1YPR0 619 aa27.44■■□□□ 1.98
LETM1-201ENST00000302787 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
LETM1-201ENST00000302787 TRIM44Q96DX7 344 aaPredicted RBP27.43■■□□□ 1.98
LETM1-201ENST00000302787 NCLP19338 710 aaKnown RBP27.42■■□□□ 1.98
LETM1-201ENST00000302787 CC2D1BQ5T0F9 858 aaKnown RBP27.42■■□□□ 1.98
LETM1-201ENST00000302787 C14orf37Q86TY3 774 aa27.41■■□□□ 1.98
LETM1-201ENST00000302787 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
LETM1-201ENST00000302787 CCER2I3L3R5 266 aa27.41■■□□□ 1.98
LETM1-201ENST00000302787 B4GALNT3Q6L9W6 998 aa27.41■■□□□ 1.98
LETM1-201ENST00000302787 CUX2O14529 1486 aa27.4■■□□□ 1.98
LETM1-201ENST00000302787 NOP58Q9Y2X3 529 aaKnown RBP27.4■■□□□ 1.98
LETM1-201ENST00000302787 RGS3P49796 1198 aa27.38■■□□□ 1.97
LETM1-201ENST00000302787 LAS1LQ9Y4W2 734 aaKnown RBP27.38■■□□□ 1.97
LETM1-201ENST00000302787 MAPK8IP3Q9UPT6 1336 aa27.37■■□□□ 1.97
LETM1-201ENST00000302787 PLEKHG5O94827 1062 aa27.34■■□□□ 1.97
LETM1-201ENST00000302787 FRAT1Q92837 279 aaPredicted RBP27.34■■□□□ 1.97
LETM1-201ENST00000302787 NUDCQ9Y266 331 aa27.33■■□□□ 1.97
LETM1-201ENST00000302787 ABCC8Q09428 1581 aa27.33■■□□□ 1.96
LETM1-201ENST00000302787 DCAF11Q8TEB1 546 aa27.33■■□□□ 1.96
LETM1-201ENST00000302787 CASC1Q6TDU7 716 aa27.32■■□□□ 1.96
LETM1-201ENST00000302787 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
LETM1-201ENST00000302787 KANK4Q5T7N3 995 aaPredicted RBP27.31■■□□□ 1.96
LETM1-201ENST00000302787 ARHGAP35Q9NRY4 1499 aa27.3■■□□□ 1.96
LETM1-201ENST00000302787 HSPA5P11021 654 aaKnown RBP27.3■■□□□ 1.96
LETM1-201ENST00000302787 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
LETM1-201ENST00000302787 TMF1P82094 1093 aa27.29■■□□□ 1.96
LETM1-201ENST00000302787 TNNT2P45379 298 aaPredicted RBP27.29■■□□□ 1.96
LETM1-201ENST00000302787 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
LETM1-201ENST00000302787 POGKQ9P215 609 aa27.24■■□□□ 1.95
LETM1-201ENST00000302787 A0A0G2JS52 829 aa27.21■■□□□ 1.95
LETM1-201ENST00000302787 MS4A1P11836 297 aa27.19■■□□□ 1.94
LETM1-201ENST00000302787 RAB3GAP2Q9H2M9 1393 aa27.18■■□□□ 1.94
LETM1-201ENST00000302787 U2SURPO15042 1029 aaKnown RBP27.18■■□□□ 1.94
LETM1-201ENST00000302787 PTMAP06454 111 aaKnown RBP27.17■■□□□ 1.94
LETM1-201ENST00000302787 ERICH6BQ5W0A0 696 aa27.17■■□□□ 1.94
LETM1-201ENST00000302787 RBM19Q9Y4C8 960 aaKnown RBP27.16■■□□□ 1.94
LETM1-201ENST00000302787 CHMP4BQ9H444 224 aaKnown RBP27.16■■□□□ 1.94
LETM1-201ENST00000302787 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
LETM1-201ENST00000302787 ARID4BQ4LE39 1312 aaPredicted RBP27.14■■□□□ 1.93
LETM1-201ENST00000302787 FOXD1Q16676 465 aa27.12■■□□□ 1.93
LETM1-201ENST00000302787 PKD2Q13563 968 aa27.11■■□□□ 1.93
LETM1-201ENST00000302787 KANK1Q14678 1352 aa27.1■■□□□ 1.93
LETM1-201ENST00000302787 TPRNQ4KMQ1 711 aa27.1■■□□□ 1.93
LETM1-201ENST00000302787 HSP90AB1P08238 724 aaKnown RBP27.1■■□□□ 1.93
LETM1-201ENST00000302787 PNNQ9H307 717 aaKnown RBP27.1■■□□□ 1.93
LETM1-201ENST00000302787 RTN4Q9NQC3 1192 aaKnown RBP27.09■■□□□ 1.93
LETM1-201ENST00000302787 KTN1Q86UP2 1357 aaKnown RBP27.07■■□□□ 1.92
LETM1-201ENST00000302787 ZRSR1Q15695 479 aaKnown RBP27.05■■□□□ 1.92
LETM1-201ENST00000302787 MPHOSPH9Q99550 1183 aa27.04■■□□□ 1.92
LETM1-201ENST00000302787 MORC1Q86VD1 984 aa27.04■■□□□ 1.92
LETM1-201ENST00000302787 DNTTIP2Q5QJE6 756 aaKnown RBP27.02■■□□□ 1.92
LETM1-201ENST00000302787 FMN1Q68DA7 1419 aa27■■□□□ 1.91
LETM1-201ENST00000302787 CDK11BP21127 795 aaKnown RBP27■■□□□ 1.91
LETM1-201ENST00000302787 NAP1L5Q96NT1 182 aaPredicted RBP27■■□□□ 1.91
LETM1-201ENST00000302787 HSCBQ8IWL3 235 aa26.98■■□□□ 1.91
LETM1-201ENST00000302787 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
LETM1-201ENST00000302787 HAP1P54257 671 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms