RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
DDB1-201ENST00000301764 CANXP27824 592 aaKnown RBP20.55■□□□□ 0.88
DDB1-201ENST00000301764 ARXQ96QS3 562 aa20.5■□□□□ 0.87
DDB1-201ENST00000301764 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
DDB1-201ENST00000301764 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
DDB1-201ENST00000301764 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
DDB1-201ENST00000301764 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
DDB1-201ENST00000301764 KANK4Q5T7N3 995 aaPredicted RBP20.46■□□□□ 0.87
DDB1-201ENST00000301764 RRP7BPQ9NSQ0 103 aa20.46■□□□□ 0.87
DDB1-201ENST00000301764 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
DDB1-201ENST00000301764 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
DDB1-201ENST00000301764 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
DDB1-201ENST00000301764 NEFMP07197 916 aa20.43■□□□□ 0.86
DDB1-201ENST00000301764 MTUS2Q5JR59 1369 aa20.42■□□□□ 0.86
DDB1-201ENST00000301764 GLIPR1L2Q4G1C9 344 aa20.36■□□□□ 0.85
DDB1-201ENST00000301764 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
DDB1-201ENST00000301764 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.84
DDB1-201ENST00000301764 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
DDB1-201ENST00000301764 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
DDB1-201ENST00000301764 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
DDB1-201ENST00000301764 DDRGK1Q96HY6 314 aa20.31■□□□□ 0.84
DDB1-201ENST00000301764 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
DDB1-201ENST00000301764 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
DDB1-201ENST00000301764 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
DDB1-201ENST00000301764 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.24■□□□□ 0.83
DDB1-201ENST00000301764 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
DDB1-201ENST00000301764 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
DDB1-201ENST00000301764 HSP90AA1P07900 732 aaKnown RBP20.22■□□□□ 0.83
DDB1-201ENST00000301764 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
DDB1-201ENST00000301764 HSPA5P11021 654 aaKnown RBP20.2■□□□□ 0.82
DDB1-201ENST00000301764 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.2■□□□□ 0.82
DDB1-201ENST00000301764 FBLN2P98095 1184 aa20.19■□□□□ 0.82
DDB1-201ENST00000301764 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
DDB1-201ENST00000301764 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
DDB1-201ENST00000301764 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
DDB1-201ENST00000301764 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
DDB1-201ENST00000301764 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.82
DDB1-201ENST00000301764 RGS3P49796 1198 aa20.13■□□□□ 0.81
DDB1-201ENST00000301764 IPO9Q96P70 1041 aaKnown RBP20.12■□□□□ 0.81
DDB1-201ENST00000301764 WIZO95785 1651 aa20.1■□□□□ 0.81
DDB1-201ENST00000301764 BECN1Q14457 450 aa20.09■□□□□ 0.81
DDB1-201ENST00000301764 NACADO15069 1562 aa20.06■□□□□ 0.8
DDB1-201ENST00000301764 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
DDB1-201ENST00000301764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.82e-7■■■□□ 14.7
DDB1-201ENST00000301764 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
DDB1-201ENST00000301764 NAP1L5Q96NT1 182 aaPredicted RBP20.02■□□□□ 0.79
DDB1-201ENST00000301764 FOXD1Q16676 465 aa20.01■□□□□ 0.79
DDB1-201ENST00000301764 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
DDB1-201ENST00000301764 RGL3Q3MIN7 710 aa20■□□□□ 0.79
DDB1-201ENST00000301764 TRIM44Q96DX7 344 aaPredicted RBP19.99■□□□□ 0.79
DDB1-201ENST00000301764 TSPY4P0CV99 314 aa19.98■□□□□ 0.79
DDB1-201ENST00000301764 TSPY10P0CW01 314 aa19.98■□□□□ 0.79
DDB1-201ENST00000301764 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
DDB1-201ENST00000301764 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
DDB1-201ENST00000301764 TCERG1O14776 1098 aaKnown RBP19.96■□□□□ 0.79
DDB1-201ENST00000301764 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
DDB1-201ENST00000301764 CC2D1BQ5T0F9 858 aaKnown RBP19.92■□□□□ 0.78
DDB1-201ENST00000301764 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
DDB1-201ENST00000301764 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
DDB1-201ENST00000301764 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
DDB1-201ENST00000301764 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
DDB1-201ENST00000301764 CHGAP10645 457 aaKnown RBP19.85■□□□□ 0.77
DDB1-201ENST00000301764 KNSTRNQ9Y448 316 aa19.85■□□□□ 0.77
DDB1-201ENST00000301764 CUX2O14529 1486 aa19.84■□□□□ 0.77
DDB1-201ENST00000301764 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
DDB1-201ENST00000301764 NEUROD2Q15784 382 aa19.83■□□□□ 0.77
DDB1-201ENST00000301764 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.76
DDB1-201ENST00000301764 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.76
DDB1-201ENST00000301764 FRAT1Q92837 279 aaPredicted RBP19.83■□□□□ 0.76
DDB1-201ENST00000301764 CFDP1Q9UEE9 299 aaPredicted RBP19.83■□□□□ 0.76
DDB1-201ENST00000301764 MSH5O43196 834 aa19.82■□□□□ 0.76
DDB1-201ENST00000301764 PDE4AP27815 886 aa19.81■□□□□ 0.76
DDB1-201ENST00000301764 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
DDB1-201ENST00000301764 SLKQ9H2G2 1235 aaPredicted RBP19.81■□□□□ 0.76
DDB1-201ENST00000301764 SPRYD3Q8NCJ5 442 aa19.8■□□□□ 0.76
DDB1-201ENST00000301764 USP35Q9P2H5 1018 aa19.8■□□□□ 0.76
DDB1-201ENST00000301764 ANO8Q9HCE9 1232 aaPredicted RBP19.79■□□□□ 0.76
DDB1-201ENST00000301764 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
DDB1-201ENST00000301764 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
DDB1-201ENST00000301764 SLC24A1O60721 1099 aa19.78■□□□□ 0.76
DDB1-201ENST00000301764 ARID4BQ4LE39 1312 aaPredicted RBP19.77■□□□□ 0.76
DDB1-201ENST00000301764 NCLP19338 710 aaKnown RBP19.77■□□□□ 0.75
DDB1-201ENST00000301764 EXOC6Q8TAG9 804 aa19.77■□□□□ 0.75
DDB1-201ENST00000301764 L1TD1Q5T7N2 865 aaKnown RBP19.76■□□□□ 0.75
DDB1-201ENST00000301764 GOLGA6L22H0YM25 854 aa19.75■□□□□ 0.75
DDB1-201ENST00000301764 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
DDB1-201ENST00000301764 GSE1Q14687 1217 aa19.74■□□□□ 0.75
DDB1-201ENST00000301764 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
DDB1-201ENST00000301764 IL27Q8NEV9 243 aa19.71■□□□□ 0.75
DDB1-201ENST00000301764 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
DDB1-201ENST00000301764 PLIN1O60240 522 aa19.7■□□□□ 0.74
DDB1-201ENST00000301764 FTSJ3Q8IY81 847 aaKnown RBP19.7■□□□□ 0.74
DDB1-201ENST00000301764 PKD2Q13563 968 aa19.69■□□□□ 0.74
DDB1-201ENST00000301764 KIF21BO75037 1637 aa19.68■□□□□ 0.74
DDB1-201ENST00000301764 RALBP1Q15311 655 aa19.67■□□□□ 0.74
DDB1-201ENST00000301764 KTN1Q86UP2 1357 aaKnown RBP19.66■□□□□ 0.74
DDB1-201ENST00000301764 RRP1P56182 461 aaKnown RBP19.66■□□□□ 0.74
DDB1-201ENST00000301764 FHOD3Q2V2M9 1422 aa19.64■□□□□ 0.74
DDB1-201ENST00000301764 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
DDB1-201ENST00000301764 PLEKHD1A6NEE1 506 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms