RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 IRX6P78412 446 aaPredicted RBP13.32□□□□□ -0.28
TRIM44-201ENST00000299413 ISY1Q9ULR0 285 aaKnown RBP13.3□□□□□ -0.28
TRIM44-201ENST00000299413 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM44-201ENST00000299413 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
TRIM44-201ENST00000299413 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
TRIM44-201ENST00000299413 HIRIP3Q9BW71 556 aaPredicted RBP13.29□□□□□ -0.28
TRIM44-201ENST00000299413 FKBP8Q14318 412 aa13.28□□□□□ -0.28
TRIM44-201ENST00000299413 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.28
TRIM44-201ENST00000299413 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
TRIM44-201ENST00000299413 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
TRIM44-201ENST00000299413 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
TRIM44-201ENST00000299413 DDX10Q13206 875 aaKnown RBP13.25□□□□□ -0.29
TRIM44-201ENST00000299413 SOX12O15370 315 aa13.24□□□□□ -0.29
TRIM44-201ENST00000299413 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
TRIM44-201ENST00000299413 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
TRIM44-201ENST00000299413 MLECQ14165 292 aa13.21□□□□□ -0.29
TRIM44-201ENST00000299413 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
TRIM44-201ENST00000299413 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
TRIM44-201ENST00000299413 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
TRIM44-201ENST00000299413 RGL3Q3MIN7 710 aa13.2□□□□□ -0.3
TRIM44-201ENST00000299413 NCLP19338 710 aaKnown RBP13.19□□□□□ -0.3
TRIM44-201ENST00000299413 PRM3Q9NNZ6 103 aa13.19□□□□□ -0.3
TRIM44-201ENST00000299413 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
TRIM44-201ENST00000299413 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
TRIM44-201ENST00000299413 ZRSR1Q15695 479 aaKnown RBP13.14□□□□□ -0.31
TRIM44-201ENST00000299413 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
TRIM44-201ENST00000299413 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
TRIM44-201ENST00000299413 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
TRIM44-201ENST00000299413 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
TRIM44-201ENST00000299413 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
TRIM44-201ENST00000299413 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
TRIM44-201ENST00000299413 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
TRIM44-201ENST00000299413 PDE4CQ08493 712 aa13.1□□□□□ -0.31
TRIM44-201ENST00000299413 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
TRIM44-201ENST00000299413 FGD1P98174 961 aa13.09□□□□□ -0.31
TRIM44-201ENST00000299413 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
TRIM44-201ENST00000299413 POGKQ9P215 609 aa13.06□□□□□ -0.32
TRIM44-201ENST00000299413 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
TRIM44-201ENST00000299413 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRIM44-201ENST00000299413 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
TRIM44-201ENST00000299413 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
TRIM44-201ENST00000299413 KCNJ4P48050 445 aa13.03□□□□□ -0.32
TRIM44-201ENST00000299413 CASC1Q6TDU7 716 aa13.02□□□□□ -0.33
TRIM44-201ENST00000299413 DNTTIP2Q5QJE6 756 aaKnown RBP13.01□□□□□ -0.33
TRIM44-201ENST00000299413 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
TRIM44-201ENST00000299413 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
TRIM44-201ENST00000299413 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
TRIM44-201ENST00000299413 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
TRIM44-201ENST00000299413 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
TRIM44-201ENST00000299413 ERICH6BQ5W0A0 696 aa12.98□□□□□ -0.33
TRIM44-201ENST00000299413 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
TRIM44-201ENST00000299413 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
TRIM44-201ENST00000299413 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
TRIM44-201ENST00000299413 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
TRIM44-201ENST00000299413 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
TRIM44-201ENST00000299413 KRI1Q8N9T8 703 aaKnown RBP12.94□□□□□ -0.34
TRIM44-201ENST00000299413 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
TRIM44-201ENST00000299413 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
TRIM44-201ENST00000299413 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
TRIM44-201ENST00000299413 APBB1O00213 710 aa12.94□□□□□ -0.34
TRIM44-201ENST00000299413 BECN1Q14457 450 aa12.94□□□□□ -0.34
TRIM44-201ENST00000299413 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
TRIM44-201ENST00000299413 GOLGA6L22H0YM25 854 aa12.93□□□□□ -0.34
TRIM44-201ENST00000299413 GLIPR1L2Q4G1C9 344 aa12.92□□□□□ -0.34
TRIM44-201ENST00000299413 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
TRIM44-201ENST00000299413 STK26Q9P289 416 aa12.92□□□□□ -0.34
TRIM44-201ENST00000299413 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
TRIM44-201ENST00000299413 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
TRIM44-201ENST00000299413 RGS3P49796 1198 aa12.91□□□□□ -0.34
TRIM44-201ENST00000299413 G3V3G9 751 aa12.9□□□□□ -0.34
TRIM44-201ENST00000299413 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
TRIM44-201ENST00000299413 MSH5O43196 834 aa12.89□□□□□ -0.35
TRIM44-201ENST00000299413 GNL2Q13823 731 aaKnown RBP12.89□□□□□ -0.35
TRIM44-201ENST00000299413 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
TRIM44-201ENST00000299413 CHMP3Q9Y3E7 222 aa12.87□□□□□ -0.35
TRIM44-201ENST00000299413 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
TRIM44-201ENST00000299413 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
TRIM44-201ENST00000299413 SRPK2P78362 688 aaKnown RBP12.85□□□□□ -0.35
TRIM44-201ENST00000299413 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
TRIM44-201ENST00000299413 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
TRIM44-201ENST00000299413 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
TRIM44-201ENST00000299413 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
TRIM44-201ENST00000299413 NOC3LQ8WTT2 800 aaKnown RBP12.83□□□□□ -0.36
TRIM44-201ENST00000299413 NAP1L5Q96NT1 182 aaPredicted RBP12.82□□□□□ -0.36
TRIM44-201ENST00000299413 ARID3AQ99856 593 aa12.81□□□□□ -0.36
TRIM44-201ENST00000299413 GOLGA6L6A8MZA4 724 aa12.81□□□□□ -0.36
TRIM44-201ENST00000299413 DRC7Q8IY82 874 aa12.8□□□□□ -0.36
TRIM44-201ENST00000299413 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM44-201ENST00000299413 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
TRIM44-201ENST00000299413 GOLGA6L4A6NEF3 574 aa12.8□□□□□ -0.36
TRIM44-201ENST00000299413 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
TRIM44-201ENST00000299413 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
TRIM44-201ENST00000299413 CREBRFQ8IUR6 639 aa12.8□□□□□ -0.36
TRIM44-201ENST00000299413 CFDP1Q9UEE9 299 aaPredicted RBP12.79□□□□□ -0.36
TRIM44-201ENST00000299413 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
TRIM44-201ENST00000299413 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
TRIM44-201ENST00000299413 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
TRIM44-201ENST00000299413 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
TRIM44-201ENST00000299413 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
TRIM44-201ENST00000299413 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms