RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 TULP1O00294 542 aaPredicted RBP9.69□□□□□ -0.86
TSC1-201ENST00000298552 ACIN1Q9UKV3 1341 aaKnown RBP9.69□□□□□ -0.86
TSC1-201ENST00000298552 NEFHP12036 1026 aa9.69□□□□□ -0.86
TSC1-201ENST00000298552 RRP12Q5JTH9 1297 aaKnown RBP9.69□□□□□ -0.86
TSC1-201ENST00000298552 NPHP1O15259 732 aa9.68□□□□□ -0.86
TSC1-201ENST00000298552 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
TSC1-201ENST00000298552 HMMRO75330 724 aa9.68□□□□□ -0.86
TSC1-201ENST00000298552 TPM4P67936 248 aa9.67□□□□□ -0.86
TSC1-201ENST00000298552 HMGB1P09429 215 aaKnown RBP9.66□□□□□ -0.86
TSC1-201ENST00000298552 CSRNP3Q8WYN3 585 aa9.66□□□□□ -0.86
TSC1-201ENST00000298552 FAM50AQ14320 339 aaKnown RBP9.65□□□□□ -0.86
TSC1-201ENST00000298552 HTATSF1O43719 755 aaKnown RBP9.65□□□□□ -0.86
TSC1-201ENST00000298552 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.87
TSC1-201ENST00000298552 FKBP8Q14318 412 aa9.64□□□□□ -0.87
TSC1-201ENST00000298552 TMX4Q9H1E5 349 aaPredicted RBP9.63□□□□□ -0.87
TSC1-201ENST00000298552 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
TSC1-201ENST00000298552 FGD1P98174 961 aa9.63□□□□□ -0.87
TSC1-201ENST00000298552 HSP90B1P14625 803 aaKnown RBP9.62□□□□□ -0.87
TSC1-201ENST00000298552 MSNP26038 577 aaKnown RBP9.62□□□□□ -0.87
TSC1-201ENST00000298552 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
TSC1-201ENST00000298552 A0A0G2JS52 829 aa9.6□□□□□ -0.87
TSC1-201ENST00000298552 CCDC70Q6NSX1 233 aa9.6□□□□□ -0.87
TSC1-201ENST00000298552 SEPT11Q9NVA2 429 aaKnown RBP9.6□□□□□ -0.87
TSC1-201ENST00000298552 MEX3CQ5U5Q3 659 aaKnown RBP9.59□□□□□ -0.87
TSC1-201ENST00000298552 NAP1L5Q96NT1 182 aaPredicted RBP9.59□□□□□ -0.88
TSC1-201ENST00000298552 KAT6BQ8WYB5 2073 aa9.58□□□□□ -0.88
TSC1-201ENST00000298552 APPP05067 770 aa9.58□□□□□ -0.88
TSC1-201ENST00000298552 MS4A1P11836 297 aa9.58□□□□□ -0.88
TSC1-201ENST00000298552 MCCP23508 829 aa9.57□□□□□ -0.88
TSC1-201ENST00000298552 CCDC136Q96JN2 1154 aa9.57□□□□□ -0.88
TSC1-201ENST00000298552 GPS2Q13227 327 aa9.57□□□□□ -0.88
TSC1-201ENST00000298552 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
TSC1-201ENST00000298552 GNL2Q13823 731 aaKnown RBP9.57□□□□□ -0.88
TSC1-201ENST00000298552 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
TSC1-201ENST00000298552 PPM1GO15355 546 aaPredicted RBP9.56□□□□□ -0.88
TSC1-201ENST00000298552 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
TSC1-201ENST00000298552 RDXP35241 583 aaKnown RBP9.56□□□□□ -0.88
TSC1-201ENST00000298552 DRC7Q8IY82 874 aa9.55□□□□□ -0.88
TSC1-201ENST00000298552 CHMP4AQ9BY43 222 aa9.55□□□□□ -0.88
TSC1-201ENST00000298552 CDR1P51861 262 aa9.55□□□□□ -0.88
TSC1-201ENST00000298552 ZRSR2Q15696 482 aaKnown RBP9.55□□□□□ -0.88
TSC1-201ENST00000298552 NEXNQ0ZGT2 675 aa9.55□□□□□ -0.88
TSC1-201ENST00000298552 SYAP1Q96A49 352 aaPredicted RBP9.54□□□□□ -0.88
TSC1-201ENST00000298552 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
TSC1-201ENST00000298552 ARXQ96QS3 562 aa9.53□□□□□ -0.88
TSC1-201ENST00000298552 TPM3P06753 285 aa9.53□□□□□ -0.88
TSC1-201ENST00000298552 KCNJ4P48050 445 aa9.52□□□□□ -0.88
TSC1-201ENST00000298552 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
TSC1-201ENST00000298552 CHMP4CQ96CF2 233 aa9.52□□□□□ -0.89
TSC1-201ENST00000298552 HMGB3O15347 200 aaKnown RBP9.51□□□□□ -0.89
TSC1-201ENST00000298552 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
TSC1-201ENST00000298552 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
TSC1-201ENST00000298552 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
TSC1-201ENST00000298552 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
TSC1-201ENST00000298552 CAGE1Q8TC20 777 aa9.49□□□□□ -0.89
TSC1-201ENST00000298552 CFAP53Q96M91 514 aa9.49□□□□□ -0.89
TSC1-201ENST00000298552 GOLGA6L3A6NEY3 463 aa9.48□□□□□ -0.89
TSC1-201ENST00000298552 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
TSC1-201ENST00000298552 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
TSC1-201ENST00000298552 TPM2P07951 284 aa9.48□□□□□ -0.89
TSC1-201ENST00000298552 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
TSC1-201ENST00000298552 CCDC191Q8NCU4 936 aa9.47□□□□□ -0.89
TSC1-201ENST00000298552 PHF14O94880 888 aa9.47□□□□□ -0.89
TSC1-201ENST00000298552 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
TSC1-201ENST00000298552 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
TSC1-201ENST00000298552 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
TSC1-201ENST00000298552 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
TSC1-201ENST00000298552 NBR1Q14596 966 aa9.45□□□□□ -0.9
TSC1-201ENST00000298552 HDAC5Q9UQL6 1122 aa9.45□□□□□ -0.9
TSC1-201ENST00000298552 FEZ1Q99689 392 aa9.45□□□□□ -0.9
TSC1-201ENST00000298552 KIF3AQ9Y496 699 aa9.45□□□□□ -0.9
TSC1-201ENST00000298552 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
TSC1-201ENST00000298552 TPM1P09493 284 aa9.45□□□□□ -0.9
TSC1-201ENST00000298552 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
TSC1-201ENST00000298552 MYO6Q9UM54 1294 aa9.44□□□□□ -0.9
TSC1-201ENST00000298552 OS9Q13438 667 aaPredicted RBP9.44□□□□□ -0.9
TSC1-201ENST00000298552 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
TSC1-201ENST00000298552 ISY1Q9ULR0 285 aaKnown RBP9.44□□□□□ -0.9
TSC1-201ENST00000298552 TONSLQ96HA7 1378 aa9.44□□□□□ -0.9
TSC1-201ENST00000298552 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
TSC1-201ENST00000298552 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
TSC1-201ENST00000298552 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
TSC1-201ENST00000298552 TEX35Q5T0J7 233 aa9.41□□□□□ -0.9
TSC1-201ENST00000298552 TCEAL9Q9UHQ7 104 aa9.41□□□□□ -0.9
TSC1-201ENST00000298552 NAP1L2Q9ULW6 460 aaPredicted RBP9.41□□□□□ -0.9
TSC1-201ENST00000298552 ABCC9O60706 1549 aa9.41□□□□□ -0.9
TSC1-201ENST00000298552 INCENPQ9NQS7 918 aa9.4□□□□□ -0.9
TSC1-201ENST00000298552 HSCBQ8IWL3 235 aa9.4□□□□□ -0.9
TSC1-201ENST00000298552 KIAA1211Q6ZU35 1233 aa9.39□□□□□ -0.91
TSC1-201ENST00000298552 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
TSC1-201ENST00000298552 CCDC112Q8NEF3 446 aa9.39□□□□□ -0.91
TSC1-201ENST00000298552 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
TSC1-201ENST00000298552 IPO7O95373 1038 aaKnown RBP9.39□□□□□ -0.91
TSC1-201ENST00000298552 MYO10Q9HD67 2058 aa9.38□□□□□ -0.91
TSC1-201ENST00000298552 AK7Q96M32 723 aa9.38□□□□□ -0.91
TSC1-201ENST00000298552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■■■■■ 150.8
TSC1-201ENST00000298552 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
TSC1-201ENST00000298552 GBP4Q96PP9 640 aa9.38□□□□□ -0.91
TSC1-201ENST00000298552 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
TSC1-201ENST00000298552 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms