RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
CNTNAP3-201ENST00000297668 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
CNTNAP3-201ENST00000297668 EEA1Q15075 1411 aa22.17■■□□□ 1.14
CNTNAP3-201ENST00000297668 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
CNTNAP3-201ENST00000297668 DDRGK1Q96HY6 314 aa22.15■■□□□ 1.14
CNTNAP3-201ENST00000297668 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
CNTNAP3-201ENST00000297668 BECN1Q14457 450 aa22.14■■□□□ 1.13
CNTNAP3-201ENST00000297668 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
CNTNAP3-201ENST00000297668 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
CNTNAP3-201ENST00000297668 RGL3Q3MIN7 710 aa22.09■■□□□ 1.13
CNTNAP3-201ENST00000297668 ANP32EQ9BTT0 268 aa22.07■■□□□ 1.12
CNTNAP3-201ENST00000297668 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
CNTNAP3-201ENST00000297668 SUPT16HQ9Y5B9 1047 aaKnown RBP22.07■■□□□ 1.12
CNTNAP3-201ENST00000297668 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
CNTNAP3-201ENST00000297668 KCNH8Q96L42 1107 aa22.02■■□□□ 1.12
CNTNAP3-201ENST00000297668 CDCA8Q53HL2 280 aa22.02■■□□□ 1.11
CNTNAP3-201ENST00000297668 CFAP53Q96M91 514 aa22.02■■□□□ 1.11
CNTNAP3-201ENST00000297668 KNSTRNQ9Y448 316 aa22.01■■□□□ 1.11
CNTNAP3-201ENST00000297668 GOLGA6L22H0YM25 854 aa22■■□□□ 1.11
CNTNAP3-201ENST00000297668 TRIM44Q96DX7 344 aaPredicted RBP21.99■■□□□ 1.11
CNTNAP3-201ENST00000297668 NCLP19338 710 aaKnown RBP21.99■■□□□ 1.11
CNTNAP3-201ENST00000297668 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
CNTNAP3-201ENST00000297668 PPP1R15AO75807 674 aaPredicted RBP21.98■■□□□ 1.11
CNTNAP3-201ENST00000297668 CARD11Q9BXL7 1154 aa21.98■■□□□ 1.11
CNTNAP3-201ENST00000297668 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
CNTNAP3-201ENST00000297668 CFDP1Q9UEE9 299 aaPredicted RBP21.97■■□□□ 1.11
CNTNAP3-201ENST00000297668 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
CNTNAP3-201ENST00000297668 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
CNTNAP3-201ENST00000297668 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
CNTNAP3-201ENST00000297668 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
CNTNAP3-201ENST00000297668 SIN3AQ96ST3 1273 aa21.91■■□□□ 1.1
CNTNAP3-201ENST00000297668 ZBTB7CA1YPR0 619 aa21.91■■□□□ 1.1
CNTNAP3-201ENST00000297668 FTSJ3Q8IY81 847 aaKnown RBP21.89■■□□□ 1.1
CNTNAP3-201ENST00000297668 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
CNTNAP3-201ENST00000297668 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
CNTNAP3-201ENST00000297668 A0A0G2JS52 829 aa21.88■■□□□ 1.09
CNTNAP3-201ENST00000297668 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
CNTNAP3-201ENST00000297668 PLEKHG5O94827 1062 aa21.87■■□□□ 1.09
CNTNAP3-201ENST00000297668 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
CNTNAP3-201ENST00000297668 CDK11BP21127 795 aaKnown RBP21.83■■□□□ 1.09
CNTNAP3-201ENST00000297668 RGS3P49796 1198 aa21.82■■□□□ 1.08
CNTNAP3-201ENST00000297668 CASC1Q6TDU7 716 aa21.82■■□□□ 1.08
CNTNAP3-201ENST00000297668 MAPK8IP3Q9UPT6 1336 aa21.82■■□□□ 1.08
CNTNAP3-201ENST00000297668 NUDCQ9Y266 331 aa21.8■■□□□ 1.08
CNTNAP3-201ENST00000297668 PTMAP06454 111 aaKnown RBP21.79■■□□□ 1.08
CNTNAP3-201ENST00000297668 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
CNTNAP3-201ENST00000297668 ERICH6BQ5W0A0 696 aa21.78■■□□□ 1.08
CNTNAP3-201ENST00000297668 FRAT1Q92837 279 aaPredicted RBP21.77■■□□□ 1.08
CNTNAP3-201ENST00000297668 ZRSR1Q15695 479 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3-201ENST00000297668 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3-201ENST00000297668 B4GALNT3Q6L9W6 998 aa21.74■■□□□ 1.07
CNTNAP3-201ENST00000297668 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
CNTNAP3-201ENST00000297668 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
CNTNAP3-201ENST00000297668 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
CNTNAP3-201ENST00000297668 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
CNTNAP3-201ENST00000297668 TIMELESSQ9UNS1 1208 aa21.71■■□□□ 1.07
CNTNAP3-201ENST00000297668 CHMP4BQ9H444 224 aaKnown RBP21.7■■□□□ 1.06
CNTNAP3-201ENST00000297668 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
CNTNAP3-201ENST00000297668 POGKQ9P215 609 aa21.7■■□□□ 1.06
CNTNAP3-201ENST00000297668 MS4A1P11836 297 aa21.69■■□□□ 1.06
CNTNAP3-201ENST00000297668 DNTTIP2Q5QJE6 756 aaKnown RBP21.69■■□□□ 1.06
CNTNAP3-201ENST00000297668 TPRNQ4KMQ1 711 aa21.67■■□□□ 1.06
CNTNAP3-201ENST00000297668 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
CNTNAP3-201ENST00000297668 TMF1P82094 1093 aa21.65■■□□□ 1.06
CNTNAP3-201ENST00000297668 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.06
CNTNAP3-201ENST00000297668 CCER2I3L3R5 266 aa21.64■■□□□ 1.05
CNTNAP3-201ENST00000297668 DCAF11Q8TEB1 546 aa21.64■■□□□ 1.05
CNTNAP3-201ENST00000297668 ARID4BQ4LE39 1312 aaPredicted RBP21.63■■□□□ 1.05
CNTNAP3-201ENST00000297668 HAP1P54257 671 aaPredicted RBP21.63■■□□□ 1.05
CNTNAP3-201ENST00000297668 HSP90AB1P08238 724 aaKnown RBP21.61■■□□□ 1.05
CNTNAP3-201ENST00000297668 RTN4Q9NQC3 1192 aaKnown RBP21.59■■□□□ 1.05
CNTNAP3-201ENST00000297668 NAP1L5Q96NT1 182 aaPredicted RBP21.59■■□□□ 1.05
CNTNAP3-201ENST00000297668 PNNQ9H307 717 aaKnown RBP21.58■■□□□ 1.05
CNTNAP3-201ENST00000297668 PLCB2Q00722 1185 aa21.57■■□□□ 1.04
CNTNAP3-201ENST00000297668 OS9Q13438 667 aaPredicted RBP21.54■■□□□ 1.04
CNTNAP3-201ENST00000297668 LMOD2Q6P5Q4 547 aa21.54■■□□□ 1.04
CNTNAP3-201ENST00000297668 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
CNTNAP3-201ENST00000297668 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
CNTNAP3-201ENST00000297668 FGD1P98174 961 aa21.52■■□□□ 1.04
CNTNAP3-201ENST00000297668 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.03
CNTNAP3-201ENST00000297668 HSCBQ8IWL3 235 aa21.51■■□□□ 1.03
CNTNAP3-201ENST00000297668 KCNJ4P48050 445 aa21.51■■□□□ 1.03
CNTNAP3-201ENST00000297668 NACADO15069 1562 aa21.51■■□□□ 1.03
CNTNAP3-201ENST00000297668 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
CNTNAP3-201ENST00000297668 SOGA1O94964 1423 aa21.5■■□□□ 1.03
CNTNAP3-201ENST00000297668 MORC1Q86VD1 984 aa21.48■■□□□ 1.03
CNTNAP3-201ENST00000297668 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
CNTNAP3-201ENST00000297668 VPS8Q8N3P4 1428 aa21.45■■□□□ 1.02
CNTNAP3-201ENST00000297668 KANK1Q14678 1352 aa21.45■■□□□ 1.02
CNTNAP3-201ENST00000297668 CUX2O14529 1486 aa21.44■■□□□ 1.02
CNTNAP3-201ENST00000297668 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
CNTNAP3-201ENST00000297668 TAOK2Q9UL54 1235 aa21.43■■□□□ 1.02
CNTNAP3-201ENST00000297668 PKD2Q13563 968 aa21.43■■□□□ 1.02
CNTNAP3-201ENST00000297668 GOLGA6L4A6NEF3 574 aa21.42■■□□□ 1.02
CNTNAP3-201ENST00000297668 GOLGA6L6A8MZA4 724 aa21.42■■□□□ 1.02
CNTNAP3-201ENST00000297668 NRDCO43847 1150 aa21.42■■□□□ 1.02
CNTNAP3-201ENST00000297668 KTN1Q86UP2 1357 aaKnown RBP21.42■■□□□ 1.02
CNTNAP3-201ENST00000297668 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3-201ENST00000297668 L1TD1Q5T7N2 865 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3-201ENST00000297668 NAP1L2Q9ULW6 460 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms