RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
TRAPPC10-201ENST00000291574 DDRGK1Q96HY6 314 aa18.02■□□□□ 0.48
TRAPPC10-201ENST00000291574 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
TRAPPC10-201ENST00000291574 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
TRAPPC10-201ENST00000291574 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
TRAPPC10-201ENST00000291574 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
TRAPPC10-201ENST00000291574 BECN1Q14457 450 aa17.97■□□□□ 0.47
TRAPPC10-201ENST00000291574 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
TRAPPC10-201ENST00000291574 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
TRAPPC10-201ENST00000291574 TRIM44Q96DX7 344 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC10-201ENST00000291574 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
TRAPPC10-201ENST00000291574 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
TRAPPC10-201ENST00000291574 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC10-201ENST00000291574 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
TRAPPC10-201ENST00000291574 RBM19Q9Y4C8 960 aaKnown RBP17.89■□□□□ 0.45
TRAPPC10-201ENST00000291574 RGS3P49796 1198 aa17.88■□□□□ 0.45
TRAPPC10-201ENST00000291574 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC10-201ENST00000291574 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
TRAPPC10-201ENST00000291574 MYH16Q9H6N6 1097 aa17.87■□□□□ 0.45
TRAPPC10-201ENST00000291574 ERICH6BQ5W0A0 696 aa17.86■□□□□ 0.45
TRAPPC10-201ENST00000291574 NCLP19338 710 aaKnown RBP17.86■□□□□ 0.45
TRAPPC10-201ENST00000291574 ESF1Q9H501 851 aaKnown RBP17.86■□□□□ 0.45
TRAPPC10-201ENST00000291574 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
TRAPPC10-201ENST00000291574 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.45
TRAPPC10-201ENST00000291574 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC10-201ENST00000291574 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
TRAPPC10-201ENST00000291574 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
TRAPPC10-201ENST00000291574 NEUROD2Q15784 382 aa17.81■□□□□ 0.44
TRAPPC10-201ENST00000291574 NAP1L5Q96NT1 182 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC10-201ENST00000291574 CARD11Q9BXL7 1154 aa17.8■□□□□ 0.44
TRAPPC10-201ENST00000291574 EEA1Q15075 1411 aa17.79■□□□□ 0.44
TRAPPC10-201ENST00000291574 TPRNQ4KMQ1 711 aa17.78■□□□□ 0.44
TRAPPC10-201ENST00000291574 KNSTRNQ9Y448 316 aa17.76■□□□□ 0.43
TRAPPC10-201ENST00000291574 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
TRAPPC10-201ENST00000291574 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC10-201ENST00000291574 DNTTIP2Q5QJE6 756 aaKnown RBP17.73■□□□□ 0.43
TRAPPC10-201ENST00000291574 FTSJ3Q8IY81 847 aaKnown RBP17.72■□□□□ 0.43
TRAPPC10-201ENST00000291574 TSHZ2Q9NRE2 1034 aa17.72■□□□□ 0.43
TRAPPC10-201ENST00000291574 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
TRAPPC10-201ENST00000291574 CC2D1BQ5T0F9 858 aaKnown RBP17.69■□□□□ 0.42
TRAPPC10-201ENST00000291574 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRAPPC10-201ENST00000291574 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
TRAPPC10-201ENST00000291574 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
TRAPPC10-201ENST00000291574 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
TRAPPC10-201ENST00000291574 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
TRAPPC10-201ENST00000291574 TNNT2P45379 298 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC10-201ENST00000291574 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC10-201ENST00000291574 CFDP1Q9UEE9 299 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC10-201ENST00000291574 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
TRAPPC10-201ENST00000291574 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
TRAPPC10-201ENST00000291574 PLCB2Q00722 1185 aa17.63■□□□□ 0.41
TRAPPC10-201ENST00000291574 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
TRAPPC10-201ENST00000291574 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
TRAPPC10-201ENST00000291574 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
TRAPPC10-201ENST00000291574 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
TRAPPC10-201ENST00000291574 HSP90AB1P08238 724 aaKnown RBP17.59■□□□□ 0.41
TRAPPC10-201ENST00000291574 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
TRAPPC10-201ENST00000291574 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC10-201ENST00000291574 CASC1Q6TDU7 716 aa17.56■□□□□ 0.4
TRAPPC10-201ENST00000291574 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
TRAPPC10-201ENST00000291574 C14orf37Q86TY3 774 aa17.55■□□□□ 0.4
TRAPPC10-201ENST00000291574 SOGA1O94964 1423 aa17.55■□□□□ 0.4
TRAPPC10-201ENST00000291574 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
TRAPPC10-201ENST00000291574 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC10-201ENST00000291574 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
TRAPPC10-201ENST00000291574 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
TRAPPC10-201ENST00000291574 ZRSR1Q15695 479 aaKnown RBP17.53■□□□□ 0.4
TRAPPC10-201ENST00000291574 KANK4Q5T7N3 995 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC10-201ENST00000291574 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC10-201ENST00000291574 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
TRAPPC10-201ENST00000291574 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
TRAPPC10-201ENST00000291574 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
TRAPPC10-201ENST00000291574 A0A0G2JS52 829 aa17.49■□□□□ 0.39
TRAPPC10-201ENST00000291574 FOXD1Q16676 465 aa17.49■□□□□ 0.39
TRAPPC10-201ENST00000291574 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC10-201ENST00000291574 L1TD1Q5T7N2 865 aaKnown RBP17.48■□□□□ 0.39
TRAPPC10-201ENST00000291574 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC10-201ENST00000291574 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
TRAPPC10-201ENST00000291574 RCAN3Q9UKA8 241 aa17.46■□□□□ 0.39
TRAPPC10-201ENST00000291574 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
TRAPPC10-201ENST00000291574 CDK11BP21127 795 aaKnown RBP17.46■□□□□ 0.39
TRAPPC10-201ENST00000291574 TMF1P82094 1093 aa17.45■□□□□ 0.38
TRAPPC10-201ENST00000291574 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
TRAPPC10-201ENST00000291574 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
TRAPPC10-201ENST00000291574 MS4A1P11836 297 aa17.42■□□□□ 0.38
TRAPPC10-201ENST00000291574 TCERG1O14776 1098 aaKnown RBP17.42■□□□□ 0.38
TRAPPC10-201ENST00000291574 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
TRAPPC10-201ENST00000291574 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
TRAPPC10-201ENST00000291574 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
TRAPPC10-201ENST00000291574 ARID3AQ99856 593 aa17.38■□□□□ 0.37
TRAPPC10-201ENST00000291574 POGKQ9P215 609 aa17.38■□□□□ 0.37
TRAPPC10-201ENST00000291574 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
TRAPPC10-201ENST00000291574 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
TRAPPC10-201ENST00000291574 KCNJ4P48050 445 aa17.36■□□□□ 0.37
TRAPPC10-201ENST00000291574 FGD1P98174 961 aa17.36■□□□□ 0.37
TRAPPC10-201ENST00000291574 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
TRAPPC10-201ENST00000291574 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
TRAPPC10-201ENST00000291574 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC10-201ENST00000291574 PKD2Q13563 968 aa17.34■□□□□ 0.37
TRAPPC10-201ENST00000291574 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms