RNA–Protein interactions for RNA: ENST00000286627.10

KCNMA1-201, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-201ENST00000286627 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
KCNMA1-201ENST00000286627 TNIKQ9UKE5 1360 aa22.01■■□□□ 1.11
KCNMA1-201ENST00000286627 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
KCNMA1-201ENST00000286627 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
KCNMA1-201ENST00000286627 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
KCNMA1-201ENST00000286627 MIER1Q8N108 512 aa21.97■■□□□ 1.11
KCNMA1-201ENST00000286627 HSP90AA1P07900 732 aaKnown RBP21.97■■□□□ 1.11
KCNMA1-201ENST00000286627 HIRIP3Q9BW71 556 aaPredicted RBP21.9■■□□□ 1.1
KCNMA1-201ENST00000286627 ANP32BQ92688 251 aaKnown RBP21.89■■□□□ 1.09
KCNMA1-201ENST00000286627 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
KCNMA1-201ENST00000286627 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
KCNMA1-201ENST00000286627 CFDP1Q9UEE9 299 aaPredicted RBP21.86■■□□□ 1.09
KCNMA1-201ENST00000286627 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
KCNMA1-201ENST00000286627 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
KCNMA1-201ENST00000286627 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
KCNMA1-201ENST00000286627 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
KCNMA1-201ENST00000286627 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
KCNMA1-201ENST00000286627 IRX6P78412 446 aaPredicted RBP21.7■■□□□ 1.06
KCNMA1-201ENST00000286627 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
KCNMA1-201ENST00000286627 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
KCNMA1-201ENST00000286627 CARD11Q9BXL7 1154 aa21.68■■□□□ 1.06
KCNMA1-201ENST00000286627 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
KCNMA1-201ENST00000286627 KNSTRNQ9Y448 316 aa21.67■■□□□ 1.06
KCNMA1-201ENST00000286627 CCNB3Q8WWL7 1395 aa21.63■■□□□ 1.05
KCNMA1-201ENST00000286627 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
KCNMA1-201ENST00000286627 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
KCNMA1-201ENST00000286627 CUX2O14529 1486 aa21.58■■□□□ 1.04
KCNMA1-201ENST00000286627 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
KCNMA1-201ENST00000286627 TIMELESSQ9UNS1 1208 aa21.58■■□□□ 1.04
KCNMA1-201ENST00000286627 NBR1Q14596 966 aa21.57■■□□□ 1.04
KCNMA1-201ENST00000286627 SOGA1O94964 1423 aa21.55■■□□□ 1.04
KCNMA1-201ENST00000286627 DDRGK1Q96HY6 314 aa21.54■■□□□ 1.04
KCNMA1-201ENST00000286627 C14orf37Q86TY3 774 aa21.53■■□□□ 1.04
KCNMA1-201ENST00000286627 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
KCNMA1-201ENST00000286627 BECN1Q14457 450 aa21.52■■□□□ 1.04
KCNMA1-201ENST00000286627 EIF5BO60841 1220 aaKnown RBP21.48■■□□□ 1.03
KCNMA1-201ENST00000286627 SUPT16HQ9Y5B9 1047 aaKnown RBP21.48■■□□□ 1.03
KCNMA1-201ENST00000286627 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
KCNMA1-201ENST00000286627 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
KCNMA1-201ENST00000286627 A0A0G2JS52 829 aa21.47■■□□□ 1.03
KCNMA1-201ENST00000286627 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
KCNMA1-201ENST00000286627 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
KCNMA1-201ENST00000286627 PLEKHG5O94827 1062 aa21.45■■□□□ 1.02
KCNMA1-201ENST00000286627 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
KCNMA1-201ENST00000286627 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
KCNMA1-201ENST00000286627 POGKQ9P215 609 aa21.43■■□□□ 1.02
KCNMA1-201ENST00000286627 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
KCNMA1-201ENST00000286627 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
KCNMA1-201ENST00000286627 PPM1GO15355 546 aaPredicted RBP21.42■■□□□ 1.02
KCNMA1-201ENST00000286627 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
KCNMA1-201ENST00000286627 ANP32EQ9BTT0 268 aa21.4■■□□□ 1.02
KCNMA1-201ENST00000286627 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
KCNMA1-201ENST00000286627 PPP4R2Q9NY27 417 aa21.39■■□□□ 1.02
KCNMA1-201ENST00000286627 TMF1P82094 1093 aa21.39■■□□□ 1.01
KCNMA1-201ENST00000286627 KANK1Q14678 1352 aa21.39■■□□□ 1.01
KCNMA1-201ENST00000286627 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
KCNMA1-201ENST00000286627 ARHGAP35Q9NRY4 1499 aa21.38■■□□□ 1.01
KCNMA1-201ENST00000286627 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
KCNMA1-201ENST00000286627 ARXQ96QS3 562 aa21.38■■□□□ 1.01
KCNMA1-201ENST00000286627 NEUROD2Q15784 382 aa21.37■■□□□ 1.01
KCNMA1-201ENST00000286627 SENP3-EIF4A1A0A087X0R7 540 aa21.37■■□□□ 1.01
KCNMA1-201ENST00000286627 GOLGA6L22H0YM25 854 aa21.35■■□□□ 1.01
KCNMA1-201ENST00000286627 NCLP19338 710 aaKnown RBP21.33■■□□□ 1.01
KCNMA1-201ENST00000286627 CHMP4BQ9H444 224 aaKnown RBP21.33■■□□□ 1
KCNMA1-201ENST00000286627 CCER2I3L3R5 266 aa21.32■■□□□ 1
KCNMA1-201ENST00000286627 MS4A1P11836 297 aa21.32■■□□□ 1
KCNMA1-201ENST00000286627 CC2D1BQ5T0F9 858 aaKnown RBP21.32■■□□□ 1
KCNMA1-201ENST00000286627 CASC1Q6TDU7 716 aa21.31■■□□□ 1
KCNMA1-201ENST00000286627 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
KCNMA1-201ENST00000286627 CARMIL2Q6F5E8 1435 aa21.3■■□□□ 1
KCNMA1-201ENST00000286627 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
KCNMA1-201ENST00000286627 HAP1P54257 671 aaPredicted RBP21.3■■□□□ 1
KCNMA1-201ENST00000286627 ABCC8Q09428 1581 aa21.3■■□□□ 1
KCNMA1-201ENST00000286627 FMN1Q68DA7 1419 aa21.29■■□□□ 1
KCNMA1-201ENST00000286627 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
KCNMA1-201ENST00000286627 LAS1LQ9Y4W2 734 aaKnown RBP21.28■■□□□ 1
KCNMA1-201ENST00000286627 TNNT2P45379 298 aaPredicted RBP21.26■□□□□ 0.99
KCNMA1-201ENST00000286627 HDGFP51858 240 aaKnown RBP21.25■□□□□ 0.99
KCNMA1-201ENST00000286627 FRAT1Q92837 279 aaPredicted RBP21.25■□□□□ 0.99
KCNMA1-201ENST00000286627 PKD2Q13563 968 aa21.25■□□□□ 0.99
KCNMA1-201ENST00000286627 U2SURPO15042 1029 aaKnown RBP21.24■□□□□ 0.99
KCNMA1-201ENST00000286627 GLIPR1L2Q4G1C9 344 aa21.24■□□□□ 0.99
KCNMA1-201ENST00000286627 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
KCNMA1-201ENST00000286627 RGS3P49796 1198 aa21.2■□□□□ 0.98
KCNMA1-201ENST00000286627 TRIM44Q96DX7 344 aaPredicted RBP21.2■□□□□ 0.98
KCNMA1-201ENST00000286627 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
KCNMA1-201ENST00000286627 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
KCNMA1-201ENST00000286627 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
KCNMA1-201ENST00000286627 LMOD2Q6P5Q4 547 aa21.17■□□□□ 0.98
KCNMA1-201ENST00000286627 MORC1Q86VD1 984 aa21.16■□□□□ 0.98
KCNMA1-201ENST00000286627 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
KCNMA1-201ENST00000286627 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
KCNMA1-201ENST00000286627 EFCAB2Q5VUJ9 269 aa21.15■□□□□ 0.98
KCNMA1-201ENST00000286627 ANKRD30AQ9BXX3 1397 aa21.15■□□□□ 0.98
KCNMA1-201ENST00000286627 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
KCNMA1-201ENST00000286627 B4GALNT3Q6L9W6 998 aa21.13■□□□□ 0.97
KCNMA1-201ENST00000286627 NUP155O75694 1391 aa21.12■□□□□ 0.97
KCNMA1-201ENST00000286627 GGT6Q6P531 493 aa21.12■□□□□ 0.97
KCNMA1-201ENST00000286627 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
KCNMA1-201ENST00000286627 CDK11BP21127 795 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms