RNA–Protein interactions for RNA: ENST00000285670.6

SAMSN1-201, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-201ENST00000285670 SPDYE4A6NLX3 237 aa7.63□□□□□ -1.19
SAMSN1-201ENST00000285670 C7P10643 843 aa7.63□□□□□ -1.19
SAMSN1-201ENST00000285670 PELP1Q8IZL8 1130 aaKnown RBP7.63□□□□□ -1.19
SAMSN1-201ENST00000285670 MNX1P50219 401 aaPredicted RBP7.62□□□□□ -1.19
SAMSN1-201ENST00000285670 METRNQ9UJH8 293 aa7.62□□□□□ -1.19
SAMSN1-201ENST00000285670 ATMINO43313 823 aaPredicted RBP7.59□□□□□ -1.19
SAMSN1-201ENST00000285670 MS4A3Q96HJ5 214 aa7.59□□□□□ -1.19
SAMSN1-201ENST00000285670 CSRNP3Q8WYN3 585 aa7.57□□□□□ -1.2
SAMSN1-201ENST00000285670 SCUBE2Q9NQ36 999 aa7.55□□□□□ -1.2
SAMSN1-201ENST00000285670 POTEJP0CG39 1038 aa7.53□□□□□ -1.2
SAMSN1-201ENST00000285670 SHROOM4Q9ULL8 1493 aa7.51□□□□□ -1.21
SAMSN1-201ENST00000285670 SUPT5HO00267 1087 aaKnown RBP7.5□□□□□ -1.21
SAMSN1-201ENST00000285670 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
SAMSN1-201ENST00000285670 ATN1P54259 1190 aaPredicted RBP7.49□□□□□ -1.21
SAMSN1-201ENST00000285670 CCDC61Q9Y6R9 512 aa7.49□□□□□ -1.21
SAMSN1-201ENST00000285670 ZCCHC6Q5VYS8 1495 aaKnown RBP7.48□□□□□ -1.21
SAMSN1-201ENST00000285670 KIF12Q96FN5 646 aa7.46□□□□□ -1.22
SAMSN1-201ENST00000285670 FAM163AQ96GL9 167 aaPredicted RBP7.46□□□□□ -1.22
SAMSN1-201ENST00000285670 PCGF6Q9BYE7 350 aa7.46□□□□□ -1.22
SAMSN1-201ENST00000285670 TSPYL2Q9H2G4 693 aaPredicted RBP7.46□□□□□ -1.22
SAMSN1-201ENST00000285670 TIE1P35590 1138 aa7.45□□□□□ -1.22
SAMSN1-201ENST00000285670 BMP2KQ9NSY1 1161 aaPredicted RBP7.44□□□□□ -1.22
SAMSN1-201ENST00000285670 PROM2Q8N271 834 aa7.44□□□□□ -1.22
SAMSN1-201ENST00000285670 MYO15BQ96JP2 1530 aa7.43□□□□□ -1.22
SAMSN1-201ENST00000285670 POTEFA5A3E0 1075 aa7.42□□□□□ -1.22
SAMSN1-201ENST00000285670 PPARGC1BQ86YN6 1023 aaKnown RBP7.41□□□□□ -1.22
SAMSN1-201ENST00000285670 DCAF1Q9Y4B6 1507 aa7.39□□□□□ -1.23
SAMSN1-201ENST00000285670 PLEKHG5O94827 1062 aa7.39□□□□□ -1.23
SAMSN1-201ENST00000285670 IER5LQ5T953 404 aa7.39□□□□□ -1.23
SAMSN1-201ENST00000285670 MAP3K13O43283 966 aa7.37□□□□□ -1.23
SAMSN1-201ENST00000285670 SEC24BO95487 1268 aa7.36□□□□□ -1.23
SAMSN1-201ENST00000285670 SGIP1Q9BQI5 828 aa7.36□□□□□ -1.23
SAMSN1-201ENST00000285670 TRPC6Q9Y210 931 aa7.36□□□□□ -1.23
SAMSN1-201ENST00000285670 TTLL13PA6NNM8 815 aa7.35□□□□□ -1.23
SAMSN1-201ENST00000285670 CDAN1Q8IWY9 1227 aa7.35□□□□□ -1.23
SAMSN1-201ENST00000285670 COLQQ9Y215 455 aaPredicted RBP7.33□□□□□ -1.24
SAMSN1-201ENST00000285670 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
SAMSN1-201ENST00000285670 TRIM35Q9UPQ4 493 aa7.3□□□□□ -1.24
SAMSN1-201ENST00000285670 MIER1Q8N108 512 aa7.29□□□□□ -1.24
SAMSN1-201ENST00000285670 TRIM26Q12899 539 aaPredicted RBP7.27□□□□□ -1.24
SAMSN1-201ENST00000285670 SLAIN1Q8ND83 568 aa7.27□□□□□ -1.24
SAMSN1-201ENST00000285670 PCDHB13Q9Y5F0 798 aa7.27□□□□□ -1.24
SAMSN1-201ENST00000285670 ST18O60284 1047 aa7.26□□□□□ -1.25
SAMSN1-201ENST00000285670 EHMT2Q96KQ7 1210 aa7.26□□□□□ -1.25
SAMSN1-201ENST00000285670 ZBTB47Q9UFB7 747 aaPredicted RBP7.26□□□□□ -1.25
SAMSN1-201ENST00000285670 ZEB1P37275 1124 aaPredicted RBP7.26□□□□□ -1.25
SAMSN1-201ENST00000285670 PLCG2P16885 1265 aa7.25□□□□□ -1.25
SAMSN1-201ENST00000285670 TMEM121BQ9BXQ6 578 aaPredicted RBP7.25□□□□□ -1.25
SAMSN1-201ENST00000285670 SNPHO15079 494 aa7.22□□□□□ -1.25
SAMSN1-201ENST00000285670 TMEM106CQ9BVX2 250 aa7.21□□□□□ -1.26
SAMSN1-201ENST00000285670 LOC105371045A0A1W2PR82 267 aa7.2□□□□□ -1.26
SAMSN1-201ENST00000285670 NUBP1P53384 320 aa7.2□□□□□ -1.26
SAMSN1-201ENST00000285670 IRX5P78411 483 aaPredicted RBP7.2□□□□□ -1.26
SAMSN1-201ENST00000285670 IFNL1Q8IU54 200 aa7.2□□□□□ -1.26
SAMSN1-201ENST00000285670 PLCD3Q8N3E9 789 aa7.2□□□□□ -1.26
SAMSN1-201ENST00000285670 MMRN1Q13201 1228 aa7.2□□□□□ -1.26
SAMSN1-201ENST00000285670 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
SAMSN1-201ENST00000285670 SPNS2Q8IVW8 549 aa7.18□□□□□ -1.26
SAMSN1-201ENST00000285670 MYT1Q01538 1121 aa7.18□□□□□ -1.26
SAMSN1-201ENST00000285670 OCEL1Q9H607 264 aa7.16□□□□□ -1.26
SAMSN1-201ENST00000285670 NACADO15069 1562 aa7.16□□□□□ -1.26
SAMSN1-201ENST00000285670 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.15□□□□□ -1.26
SAMSN1-201ENST00000285670 DCAF8L2P0C7V8 631 aa7.14□□□□□ -1.27
SAMSN1-201ENST00000285670 ABCC9O60706 1549 aa7.09□□□□□ -1.27
SAMSN1-201ENST00000285670 MARVELD3Q96A59 401 aa7.07□□□□□ -1.28
SAMSN1-201ENST00000285670 ACIN1Q9UKV3 1341 aaKnown RBP7.06□□□□□ -1.28
SAMSN1-201ENST00000285670 C3orf67Q6ZVT6 689 aa7.06□□□□□ -1.28
SAMSN1-201ENST00000285670 L3MBTL3Q96JM7 780 aaPredicted RBP7.06□□□□□ -1.28
SAMSN1-201ENST00000285670 EMP3P54852 163 aa7.05□□□□□ -1.28
SAMSN1-201ENST00000285670 RB1CC1Q8TDY2 1594 aa7.05□□□□□ -1.28
SAMSN1-201ENST00000285670 DCAF8Q5TAQ9 597 aa7.03□□□□□ -1.28
SAMSN1-201ENST00000285670 PDCD7Q8N8D1 485 aaKnown RBP7.03□□□□□ -1.28
SAMSN1-201ENST00000285670 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
SAMSN1-201ENST00000285670 PYGBP11216 843 aa7.03□□□□□ -1.28
SAMSN1-201ENST00000285670 ZNF467Q7Z7K2 595 aaPredicted RBP7.02□□□□□ -1.29
SAMSN1-201ENST00000285670 HS3ST6Q96QI5 342 aa7.01□□□□□ -1.29
SAMSN1-201ENST00000285670 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
SAMSN1-201ENST00000285670 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
SAMSN1-201ENST00000285670 PCDHB8Q9UN66 801 aa7.01□□□□□ -1.29
SAMSN1-201ENST00000285670 MKRN3Q13064 507 aaKnown RBP7.01□□□□□ -1.29
SAMSN1-201ENST00000285670 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
SAMSN1-201ENST00000285670 CENPBP07199 599 aaPredicted RBP7□□□□□ -1.29
SAMSN1-201ENST00000285670 GOLGA2Q08379 1002 aa7□□□□□ -1.29
SAMSN1-201ENST00000285670 TRIM41Q8WV44 630 aa6.99□□□□□ -1.29
SAMSN1-201ENST00000285670 GTF3C3Q9Y5Q9 886 aa6.98□□□□□ -1.29
SAMSN1-201ENST00000285670 GSE1Q14687 1217 aa6.97□□□□□ -1.29
SAMSN1-201ENST00000285670 FAM205CA6NFA0 338 aa6.96□□□□□ -1.29
SAMSN1-201ENST00000285670 POTEB3A0JP26 581 aa6.96□□□□□ -1.3
SAMSN1-201ENST00000285670 POTEBQ6S5H4 581 aa6.96□□□□□ -1.3
SAMSN1-201ENST00000285670 CHRM1P11229 460 aaPredicted RBP6.95□□□□□ -1.3
SAMSN1-201ENST00000285670 ILDR1Q86SU0 546 aaPredicted RBP6.95□□□□□ -1.3
SAMSN1-201ENST00000285670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.3
SAMSN1-201ENST00000285670 DIEXFQ68CQ4 756 aaKnown RBP6.94□□□□□ -1.3
SAMSN1-201ENST00000285670 FBXO3Q9UK99 471 aa6.93□□□□□ -1.3
SAMSN1-201ENST00000285670 CCER1Q8TC90 406 aaPredicted RBP6.93□□□□□ -1.3
SAMSN1-201ENST00000285670 PSEN1P49768 467 aa6.92□□□□□ -1.3
SAMSN1-201ENST00000285670 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
SAMSN1-201ENST00000285670 RSF1Q96T23 1441 aaPredicted RBP6.91□□□□□ -1.3
SAMSN1-201ENST00000285670 G3V3G9 751 aa6.9□□□□□ -1.3
SAMSN1-201ENST00000285670 HOXB1P14653 301 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms