RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
CTDSPL-201ENST00000273179 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
CTDSPL-201ENST00000273179 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
CTDSPL-201ENST00000273179 ARID4BQ4LE39 1312 aaPredicted RBP12.39□□□□□ -0.43
CTDSPL-201ENST00000273179 CNGB1Q14028 1251 aaPredicted RBP12.37□□□□□ -0.43
CTDSPL-201ENST00000273179 BCCIPQ9P287 314 aaKnown RBP eCLIP12.35□□□□□ -0.43
CTDSPL-201ENST00000273179 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
CTDSPL-201ENST00000273179 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
CTDSPL-201ENST00000273179 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
CTDSPL-201ENST00000273179 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
CTDSPL-201ENST00000273179 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
CTDSPL-201ENST00000273179 PRDM10Q9NQV6 1147 aa12.25□□□□□ -0.45
CTDSPL-201ENST00000273179 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
CTDSPL-201ENST00000273179 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
CTDSPL-201ENST00000273179 PSMD1Q99460 953 aa12.23□□□□□ -0.45
CTDSPL-201ENST00000273179 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
CTDSPL-201ENST00000273179 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.46
CTDSPL-201ENST00000273179 APPP05067 770 aa12.21□□□□□ -0.46
CTDSPL-201ENST00000273179 ZNF592Q92610 1267 aa12.19□□□□□ -0.46
CTDSPL-201ENST00000273179 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
CTDSPL-201ENST00000273179 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
CTDSPL-201ENST00000273179 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
CTDSPL-201ENST00000273179 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
CTDSPL-201ENST00000273179 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
CTDSPL-201ENST00000273179 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
CTDSPL-201ENST00000273179 CNPY4Q8N129 248 aa12.17□□□□□ -0.46
CTDSPL-201ENST00000273179 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL-201ENST00000273179 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
CTDSPL-201ENST00000273179 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
CTDSPL-201ENST00000273179 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.46
CTDSPL-201ENST00000273179 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
CTDSPL-201ENST00000273179 NBR1Q14596 966 aa12.13□□□□□ -0.47
CTDSPL-201ENST00000273179 NACADO15069 1562 aa12.12□□□□□ -0.47
CTDSPL-201ENST00000273179 CLSTN1O94985 981 aa12.12□□□□□ -0.47
CTDSPL-201ENST00000273179 IGSF3O75054 1194 aa12.11□□□□□ -0.47
CTDSPL-201ENST00000273179 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
CTDSPL-201ENST00000273179 OS9Q13438 667 aaPredicted RBP12.1□□□□□ -0.47
CTDSPL-201ENST00000273179 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
CTDSPL-201ENST00000273179 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
CTDSPL-201ENST00000273179 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL-201ENST00000273179 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
CTDSPL-201ENST00000273179 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
CTDSPL-201ENST00000273179 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
CTDSPL-201ENST00000273179 RB1CC1Q8TDY2 1594 aa12.05□□□□□ -0.48
CTDSPL-201ENST00000273179 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
CTDSPL-201ENST00000273179 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
CTDSPL-201ENST00000273179 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
CTDSPL-201ENST00000273179 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
CTDSPL-201ENST00000273179 IPO4Q8TEX9 1081 aaKnown RBP12.01□□□□□ -0.49
CTDSPL-201ENST00000273179 IL27Q8NEV9 243 aa12□□□□□ -0.49
CTDSPL-201ENST00000273179 FTSJ3Q8IY81 847 aaKnown RBP12□□□□□ -0.49
CTDSPL-201ENST00000273179 FAM193AP78312 1265 aa11.99□□□□□ -0.49
CTDSPL-201ENST00000273179 NEFMP07197 916 aa11.99□□□□□ -0.49
CTDSPL-201ENST00000273179 WIZO95785 1651 aa11.98□□□□□ -0.49
CTDSPL-201ENST00000273179 PLCD3Q8N3E9 789 aa11.96□□□□□ -0.49
CTDSPL-201ENST00000273179 SECISBP2LQ93073 1101 aaKnown RBP11.94□□□□□ -0.5
CTDSPL-201ENST00000273179 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
CTDSPL-201ENST00000273179 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
CTDSPL-201ENST00000273179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTDSPL-201ENST00000273179 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.5
CTDSPL-201ENST00000273179 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
CTDSPL-201ENST00000273179 FAM9BQ8IZU0 186 aa11.88□□□□□ -0.51
CTDSPL-201ENST00000273179 FKBP8Q14318 412 aa11.87□□□□□ -0.51
CTDSPL-201ENST00000273179 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-201ENST00000273179 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-201ENST00000273179 FBLN2P98095 1184 aa11.86□□□□□ -0.51
CTDSPL-201ENST00000273179 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
CTDSPL-201ENST00000273179 UNC13AQ9UPW8 1703 aa11.85□□□□□ -0.51
CTDSPL-201ENST00000273179 CLGNO14967 610 aa11.84□□□□□ -0.51
CTDSPL-201ENST00000273179 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
CTDSPL-201ENST00000273179 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL-201ENST00000273179 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
CTDSPL-201ENST00000273179 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
CTDSPL-201ENST00000273179 IRX3P78415 501 aaPredicted RBP11.82□□□□□ -0.52
CTDSPL-201ENST00000273179 LAS1LQ9Y4W2 734 aaKnown RBP11.81□□□□□ -0.52
CTDSPL-201ENST00000273179 RAD21O60216 631 aa11.8□□□□□ -0.52
CTDSPL-201ENST00000273179 ANAPC15P60006 121 aa11.79□□□□□ -0.52
CTDSPL-201ENST00000273179 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
CTDSPL-201ENST00000273179 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
CTDSPL-201ENST00000273179 PPP6R1Q9UPN7 881 aa11.78□□□□□ -0.52
CTDSPL-201ENST00000273179 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL-201ENST00000273179 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
CTDSPL-201ENST00000273179 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
CTDSPL-201ENST00000273179 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL-201ENST00000273179 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
CTDSPL-201ENST00000273179 SMARCA4P51532 1647 aa11.74□□□□□ -0.53
CTDSPL-201ENST00000273179 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
CTDSPL-201ENST00000273179 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
CTDSPL-201ENST00000273179 RGS3P49796 1198 aa11.72□□□□□ -0.53
CTDSPL-201ENST00000273179 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
CTDSPL-201ENST00000273179 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
CTDSPL-201ENST00000273179 MCCP23508 829 aa11.72□□□□□ -0.53
CTDSPL-201ENST00000273179 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL-201ENST00000273179 SOX12O15370 315 aa11.71□□□□□ -0.54
CTDSPL-201ENST00000273179 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTDSPL-201ENST00000273179 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
CTDSPL-201ENST00000273179 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
CTDSPL-201ENST00000273179 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
CTDSPL-201ENST00000273179 AXDND1Q5T1B0 1012 aaPredicted RBP11.66□□□□□ -0.54
CTDSPL-201ENST00000273179 PNNQ9H307 717 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms