RNA–Protein interactions for RNA: ENST00000264318.3

GABRA4-201, Transcript of gamma-aminobutyric acid type A receptor alpha4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA4, Length 11,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4-201ENST00000264318 RRP9O43818 475 aaKnown RBP12.82□□□□□ -0.36
GABRA4-201ENST00000264318 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
GABRA4-201ENST00000264318 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
GABRA4-201ENST00000264318 DNTTIP2Q5QJE6 756 aaKnown RBP12.8□□□□□ -0.36
GABRA4-201ENST00000264318 HNRNPUQ00839 825 aaKnown RBP eCLIP12.79□□□□□ -0.36
GABRA4-201ENST00000264318 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
GABRA4-201ENST00000264318 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
GABRA4-201ENST00000264318 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
GABRA4-201ENST00000264318 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
GABRA4-201ENST00000264318 MAP7D2Q96T17 732 aa12.73□□□□□ -0.37
GABRA4-201ENST00000264318 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
GABRA4-201ENST00000264318 TRIM52Q96A61 297 aa12.72□□□□□ -0.37
GABRA4-201ENST00000264318 APPP05067 770 aa12.71□□□□□ -0.37
GABRA4-201ENST00000264318 CHAF1AQ13111 956 aaPredicted RBP12.71□□□□□ -0.38
GABRA4-201ENST00000264318 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
GABRA4-201ENST00000264318 ARID4BQ4LE39 1312 aaPredicted RBP12.7□□□□□ -0.38
GABRA4-201ENST00000264318 MTERF4Q7Z6M4 381 aaKnown RBP12.7□□□□□ -0.38
GABRA4-201ENST00000264318 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
GABRA4-201ENST00000264318 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
GABRA4-201ENST00000264318 TAF3Q5VWG9 929 aa12.67□□□□□ -0.38
GABRA4-201ENST00000264318 PTMAP06454 111 aaKnown RBP12.67□□□□□ -0.38
GABRA4-201ENST00000264318 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
GABRA4-201ENST00000264318 GSE1Q14687 1217 aa12.66□□□□□ -0.38
GABRA4-201ENST00000264318 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
GABRA4-201ENST00000264318 CALRP27797 417 aaKnown RBP12.65□□□□□ -0.38
GABRA4-201ENST00000264318 TPM2P07951 284 aa12.64□□□□□ -0.39
GABRA4-201ENST00000264318 HOMEZQ8IX15 550 aa12.64□□□□□ -0.39
GABRA4-201ENST00000264318 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
GABRA4-201ENST00000264318 GOLGA6L3A6NEY3 463 aa12.58□□□□□ -0.39
GABRA4-201ENST00000264318 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
GABRA4-201ENST00000264318 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
GABRA4-201ENST00000264318 EEA1Q15075 1411 aa12.57□□□□□ -0.4
GABRA4-201ENST00000264318 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
GABRA4-201ENST00000264318 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
GABRA4-201ENST00000264318 RBM10P98175 930 aaKnown RBP12.54□□□□□ -0.4
GABRA4-201ENST00000264318 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
GABRA4-201ENST00000264318 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
GABRA4-201ENST00000264318 ARID3AQ99856 593 aa12.53□□□□□ -0.4
GABRA4-201ENST00000264318 HMGB1P09429 215 aaKnown RBP12.51□□□□□ -0.41
GABRA4-201ENST00000264318 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
GABRA4-201ENST00000264318 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
GABRA4-201ENST00000264318 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
GABRA4-201ENST00000264318 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
GABRA4-201ENST00000264318 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
GABRA4-201ENST00000264318 B4GALNT3Q6L9W6 998 aa12.47□□□□□ -0.41
GABRA4-201ENST00000264318 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
GABRA4-201ENST00000264318 CCDC66A2RUB6 948 aa12.47□□□□□ -0.41
GABRA4-201ENST00000264318 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
GABRA4-201ENST00000264318 MRS2Q9HD23 443 aa12.45□□□□□ -0.42
GABRA4-201ENST00000264318 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
GABRA4-201ENST00000264318 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
GABRA4-201ENST00000264318 TONSLQ96HA7 1378 aa12.44□□□□□ -0.42
GABRA4-201ENST00000264318 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
GABRA4-201ENST00000264318 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
GABRA4-201ENST00000264318 FAM13BQ9NYF5 915 aa12.43□□□□□ -0.42
GABRA4-201ENST00000264318 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
GABRA4-201ENST00000264318 TSPYL1Q9H0U9 437 aa12.42□□□□□ -0.42
GABRA4-201ENST00000264318 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
GABRA4-201ENST00000264318 PATL2C9JE40 543 aaKnown RBP12.4□□□□□ -0.42
GABRA4-201ENST00000264318 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
GABRA4-201ENST00000264318 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
GABRA4-201ENST00000264318 FGD1P98174 961 aa12.39□□□□□ -0.43
GABRA4-201ENST00000264318 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
GABRA4-201ENST00000264318 NAP1L2Q9ULW6 460 aaPredicted RBP12.38□□□□□ -0.43
GABRA4-201ENST00000264318 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
GABRA4-201ENST00000264318 NOM1Q5C9Z4 860 aaKnown RBP12.37□□□□□ -0.43
GABRA4-201ENST00000264318 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
GABRA4-201ENST00000264318 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
GABRA4-201ENST00000264318 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
GABRA4-201ENST00000264318 NRDCO43847 1150 aa12.34□□□□□ -0.43
GABRA4-201ENST00000264318 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
GABRA4-201ENST00000264318 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
GABRA4-201ENST00000264318 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
GABRA4-201ENST00000264318 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
GABRA4-201ENST00000264318 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
GABRA4-201ENST00000264318 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
GABRA4-201ENST00000264318 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
GABRA4-201ENST00000264318 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
GABRA4-201ENST00000264318 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
GABRA4-201ENST00000264318 MS4A1P11836 297 aa12.29□□□□□ -0.44
GABRA4-201ENST00000264318 TEX35Q5T0J7 233 aa12.28□□□□□ -0.44
GABRA4-201ENST00000264318 GPS2Q13227 327 aa12.28□□□□□ -0.44
GABRA4-201ENST00000264318 GZF1Q9H116 711 aaPredicted RBP12.27□□□□□ -0.45
GABRA4-201ENST00000264318 MSH5O43196 834 aa12.27□□□□□ -0.45
GABRA4-201ENST00000264318 ISY1Q9ULR0 285 aaKnown RBP12.26□□□□□ -0.45
GABRA4-201ENST00000264318 HMGN5P82970 282 aaKnown RBP12.26□□□□□ -0.45
GABRA4-201ENST00000264318 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
GABRA4-201ENST00000264318 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
GABRA4-201ENST00000264318 SKOR2Q2VWA4 1001 aaPredicted RBP12.24□□□□□ -0.45
GABRA4-201ENST00000264318 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
GABRA4-201ENST00000264318 MRE11P49959 708 aa12.24□□□□□ -0.45
GABRA4-201ENST00000264318 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
GABRA4-201ENST00000264318 CLGNO14967 610 aa12.23□□□□□ -0.45
GABRA4-201ENST00000264318 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
GABRA4-201ENST00000264318 SYAP1Q96A49 352 aaPredicted RBP12.23□□□□□ -0.45
GABRA4-201ENST00000264318 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
GABRA4-201ENST00000264318 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
GABRA4-201ENST00000264318 AAMPQ13685 434 aa12.22□□□□□ -0.45
GABRA4-201ENST00000264318 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
GABRA4-201ENST00000264318 CCDC9Q9Y3X0 531 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms