RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 SETQ01105 290 aaPredicted RBP8.71□□□□□ -1.01
POLR1A-201ENST00000263857 TMC1Q8TDI8 760 aa8.7□□□□□ -1.02
POLR1A-201ENST00000263857 GOLGA6L4A6NEF3 574 aa8.68□□□□□ -1.02
POLR1A-201ENST00000263857 CCDC34Q96HJ3 373 aa8.67□□□□□ -1.02
POLR1A-201ENST00000263857 MS4A1P11836 297 aa8.67□□□□□ -1.02
POLR1A-201ENST00000263857 FGD1P98174 961 aa8.65□□□□□ -1.02
POLR1A-201ENST00000263857 MCCP23508 829 aa8.64□□□□□ -1.03
POLR1A-201ENST00000263857 FTSJ3Q8IY81 847 aaKnown RBP8.63□□□□□ -1.03
POLR1A-201ENST00000263857 GON4LQ3T8J9 2241 aa8.63□□□□□ -1.03
POLR1A-201ENST00000263857 HTATSF1O43719 755 aaKnown RBP8.63□□□□□ -1.03
POLR1A-201ENST00000263857 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
POLR1A-201ENST00000263857 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
POLR1A-201ENST00000263857 CLSTN1O94985 981 aa8.62□□□□□ -1.03
POLR1A-201ENST00000263857 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
POLR1A-201ENST00000263857 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
POLR1A-201ENST00000263857 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
POLR1A-201ENST00000263857 TPM4P67936 248 aa8.61□□□□□ -1.03
POLR1A-201ENST00000263857 HSCBQ8IWL3 235 aa8.61□□□□□ -1.03
POLR1A-201ENST00000263857 SYAP1Q96A49 352 aaPredicted RBP8.61□□□□□ -1.03
POLR1A-201ENST00000263857 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
POLR1A-201ENST00000263857 DRC7Q8IY82 874 aa8.61□□□□□ -1.03
POLR1A-201ENST00000263857 HSP90AB1P08238 724 aaKnown RBP8.6□□□□□ -1.03
POLR1A-201ENST00000263857 PRM3Q9NNZ6 103 aa8.6□□□□□ -1.03
POLR1A-201ENST00000263857 EIF4G2P78344 907 aaKnown RBP eCLIP8.59□□□□□ -1.038e-7■■■■■ 28.7
POLR1A-201ENST00000263857 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
POLR1A-201ENST00000263857 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
POLR1A-201ENST00000263857 NOP58Q9Y2X3 529 aaKnown RBP8.58□□□□□ -1.04
POLR1A-201ENST00000263857 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
POLR1A-201ENST00000263857 GBP4Q96PP9 640 aa8.58□□□□□ -1.04
POLR1A-201ENST00000263857 KCNJ4P48050 445 aa8.58□□□□□ -1.04
POLR1A-201ENST00000263857 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
POLR1A-201ENST00000263857 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
POLR1A-201ENST00000263857 KAT6BQ8WYB5 2073 aa8.56□□□□□ -1.04
POLR1A-201ENST00000263857 A0A0G2JS52 829 aa8.55□□□□□ -1.04
POLR1A-201ENST00000263857 PHF14O94880 888 aa8.54□□□□□ -1.04
POLR1A-201ENST00000263857 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
POLR1A-201ENST00000263857 RRP12Q5JTH9 1297 aaKnown RBP8.54□□□□□ -1.04
POLR1A-201ENST00000263857 CHGAP10645 457 aaKnown RBP8.54□□□□□ -1.04
POLR1A-201ENST00000263857 GPS2Q13227 327 aa8.54□□□□□ -1.04
POLR1A-201ENST00000263857 NPHP1O15259 732 aa8.54□□□□□ -1.04
POLR1A-201ENST00000263857 OS9Q13438 667 aaPredicted RBP8.53□□□□□ -1.04
POLR1A-201ENST00000263857 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
POLR1A-201ENST00000263857 TPM3P06753 285 aa8.53□□□□□ -1.04
POLR1A-201ENST00000263857 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
POLR1A-201ENST00000263857 GOLGA6L3A6NEY3 463 aa8.53□□□□□ -1.04
POLR1A-201ENST00000263857 CEP89Q96ST8 783 aa8.52□□□□□ -1.04
POLR1A-201ENST00000263857 SCAF1Q9H7N4 1312 aaKnown RBP8.52□□□□□ -1.04
POLR1A-201ENST00000263857 HMMRO75330 724 aa8.52□□□□□ -1.05
POLR1A-201ENST00000263857 MAPK8IP3Q9UPT6 1336 aa8.51□□□□□ -1.05
POLR1A-201ENST00000263857 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
POLR1A-201ENST00000263857 HSP90B1P14625 803 aaKnown RBP8.5□□□□□ -1.05
POLR1A-201ENST00000263857 NCBP3Q53F19 620 aaKnown RBP8.5□□□□□ -1.05
POLR1A-201ENST00000263857 KIAA1211Q6ZU35 1233 aa8.5□□□□□ -1.05
POLR1A-201ENST00000263857 CHMP4AQ9BY43 222 aa8.5□□□□□ -1.05
POLR1A-201ENST00000263857 NPM1P06748 294 aaKnown RBP eCLIP8.5□□□□□ -1.05
POLR1A-201ENST00000263857 LAS1LQ9Y4W2 734 aaKnown RBP8.5□□□□□ -1.05
POLR1A-201ENST00000263857 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
POLR1A-201ENST00000263857 DCAF1Q9Y4B6 1507 aa8.49□□□□□ -1.05
POLR1A-201ENST00000263857 FBLN2P98095 1184 aa8.49□□□□□ -1.05
POLR1A-201ENST00000263857 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
POLR1A-201ENST00000263857 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
POLR1A-201ENST00000263857 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
POLR1A-201ENST00000263857 CDR1P51861 262 aa8.48□□□□□ -1.05
POLR1A-201ENST00000263857 PPP4R2Q9NY27 417 aa8.48□□□□□ -1.05
POLR1A-201ENST00000263857 RSPH6AQ9H0K4 717 aa8.48□□□□□ -1.05
POLR1A-201ENST00000263857 CHMP4CQ96CF2 233 aa8.48□□□□□ -1.05
POLR1A-201ENST00000263857 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
POLR1A-201ENST00000263857 CALD1Q05682 793 aaKnown RBP8.47□□□□□ -1.05
POLR1A-201ENST00000263857 TEX35Q5T0J7 233 aa8.47□□□□□ -1.05
POLR1A-201ENST00000263857 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
POLR1A-201ENST00000263857 C14orf37Q86TY3 774 aa8.47□□□□□ -1.05
POLR1A-201ENST00000263857 GPATCH3Q96I76 525 aa8.46□□□□□ -1.06
POLR1A-201ENST00000263857 SALL2Q9Y467 1007 aaPredicted RBP8.46□□□□□ -1.06
POLR1A-201ENST00000263857 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.06
POLR1A-201ENST00000263857 TPM1P09493 284 aa8.45□□□□□ -1.06
POLR1A-201ENST00000263857 TSPY4P0CV99 314 aa8.45□□□□□ -1.06
POLR1A-201ENST00000263857 TSPY10P0CW01 314 aa8.45□□□□□ -1.06
POLR1A-201ENST00000263857 HDAC5Q9UQL6 1122 aa8.44□□□□□ -1.06
POLR1A-201ENST00000263857 CCDC180Q9P1Z9 1646 aa8.44□□□□□ -1.06
POLR1A-201ENST00000263857 HSP90AA2PQ14568 343 aaPredicted RBP8.44□□□□□ -1.06
POLR1A-201ENST00000263857 DCTN1Q14203 1278 aa8.44□□□□□ -1.06
POLR1A-201ENST00000263857 CCDC191Q8NCU4 936 aa8.44□□□□□ -1.06
POLR1A-201ENST00000263857 KIF3AQ9Y496 699 aa8.44□□□□□ -1.06
POLR1A-201ENST00000263857 TSR1Q2NL82 804 aaKnown RBP8.43□□□□□ -1.06
POLR1A-201ENST00000263857 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
POLR1A-201ENST00000263857 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
POLR1A-201ENST00000263857 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
POLR1A-201ENST00000263857 TPM2P07951 284 aa8.42□□□□□ -1.06
POLR1A-201ENST00000263857 ISY1Q9ULR0 285 aaKnown RBP8.42□□□□□ -1.06
POLR1A-201ENST00000263857 RDXP35241 583 aaKnown RBP8.42□□□□□ -1.06
POLR1A-201ENST00000263857 KRI1Q8N9T8 703 aaKnown RBP8.41□□□□□ -1.06
POLR1A-201ENST00000263857 AK7Q96M32 723 aa8.41□□□□□ -1.06
POLR1A-201ENST00000263857 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
POLR1A-201ENST00000263857 IPO8O15397 1037 aaKnown RBP8.41□□□□□ -1.06
POLR1A-201ENST00000263857 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
POLR1A-201ENST00000263857 CWC15Q9P013 229 aaKnown RBP8.4□□□□□ -1.07
POLR1A-201ENST00000263857 IPO7O95373 1038 aaKnown RBP8.39□□□□□ -1.07
POLR1A-201ENST00000263857 RGS3P49796 1198 aa8.39□□□□□ -1.07
POLR1A-201ENST00000263857 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
POLR1A-201ENST00000263857 RSF1Q96T23 1441 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms