RNA–Protein interactions for RNA: ENST00000246043.8

RRBP1-201, Transcript of ribosome binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RRBP1, Length 4,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRBP1-201ENST00000246043 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
RRBP1-201ENST00000246043 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
RRBP1-201ENST00000246043 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
RRBP1-201ENST00000246043 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
RRBP1-201ENST00000246043 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.338e-7■□□□□ 9.2
RRBP1-201ENST00000246043 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
RRBP1-201ENST00000246043 TNNT2P45379 298 aaPredicted RBP17.07■□□□□ 0.32
RRBP1-201ENST00000246043 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
RRBP1-201ENST00000246043 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
RRBP1-201ENST00000246043 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
RRBP1-201ENST00000246043 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
RRBP1-201ENST00000246043 ZNF777Q9ULD5 760 aaPredicted RBP17■□□□□ 0.31
RRBP1-201ENST00000246043 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
RRBP1-201ENST00000246043 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
RRBP1-201ENST00000246043 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
RRBP1-201ENST00000246043 L1TD1Q5T7N2 865 aaKnown RBP16.96■□□□□ 0.31
RRBP1-201ENST00000246043 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
RRBP1-201ENST00000246043 SIN3AQ96ST3 1273 aa16.91■□□□□ 0.3
RRBP1-201ENST00000246043 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
RRBP1-201ENST00000246043 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
RRBP1-201ENST00000246043 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
RRBP1-201ENST00000246043 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
RRBP1-201ENST00000246043 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
RRBP1-201ENST00000246043 KDM2AQ9Y2K7 1162 aa16.85■□□□□ 0.29
RRBP1-201ENST00000246043 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
RRBP1-201ENST00000246043 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
RRBP1-201ENST00000246043 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
RRBP1-201ENST00000246043 PTMAP06454 111 aaKnown RBP16.84■□□□□ 0.29
RRBP1-201ENST00000246043 RRP7BPQ9NSQ0 103 aa16.84■□□□□ 0.29
RRBP1-201ENST00000246043 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
RRBP1-201ENST00000246043 RGS3P49796 1198 aa16.82■□□□□ 0.28
RRBP1-201ENST00000246043 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
RRBP1-201ENST00000246043 DNTTIP2Q5QJE6 756 aaKnown RBP16.81■□□□□ 0.28
RRBP1-201ENST00000246043 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
RRBP1-201ENST00000246043 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
RRBP1-201ENST00000246043 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
RRBP1-201ENST00000246043 TSPY4P0CV99 314 aa16.77■□□□□ 0.27
RRBP1-201ENST00000246043 TSPY10P0CW01 314 aa16.77■□□□□ 0.27
RRBP1-201ENST00000246043 FBLN2P98095 1184 aa16.75■□□□□ 0.27
RRBP1-201ENST00000246043 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
RRBP1-201ENST00000246043 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
RRBP1-201ENST00000246043 RSPH6AQ9H0K4 717 aa16.73■□□□□ 0.27
RRBP1-201ENST00000246043 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
RRBP1-201ENST00000246043 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
RRBP1-201ENST00000246043 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
RRBP1-201ENST00000246043 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
RRBP1-201ENST00000246043 CDK11BP21127 795 aaKnown RBP16.7■□□□□ 0.26
RRBP1-201ENST00000246043 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
RRBP1-201ENST00000246043 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
RRBP1-201ENST00000246043 HSP90AB1P08238 724 aaKnown RBP16.68■□□□□ 0.26
RRBP1-201ENST00000246043 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
RRBP1-201ENST00000246043 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
RRBP1-201ENST00000246043 MS4A1P11836 297 aa16.66■□□□□ 0.26
RRBP1-201ENST00000246043 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
RRBP1-201ENST00000246043 SOGA1O94964 1423 aa16.66■□□□□ 0.26
RRBP1-201ENST00000246043 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
RRBP1-201ENST00000246043 PTMSP20962 102 aa16.65■□□□□ 0.26
RRBP1-201ENST00000246043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.268e-14■■■■□ 22.8
RRBP1-201ENST00000246043 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
RRBP1-201ENST00000246043 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
RRBP1-201ENST00000246043 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
RRBP1-201ENST00000246043 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
RRBP1-201ENST00000246043 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
RRBP1-201ENST00000246043 RAB3GAP2Q9H2M9 1393 aa16.63■□□□□ 0.25
RRBP1-201ENST00000246043 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
RRBP1-201ENST00000246043 GOLGA6L3A6NEY3 463 aa16.61■□□□□ 0.25
RRBP1-201ENST00000246043 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
RRBP1-201ENST00000246043 GSE1Q14687 1217 aa16.61■□□□□ 0.25
RRBP1-201ENST00000246043 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
RRBP1-201ENST00000246043 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
RRBP1-201ENST00000246043 GBP4Q96PP9 640 aa16.59■□□□□ 0.25
RRBP1-201ENST00000246043 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
RRBP1-201ENST00000246043 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
RRBP1-201ENST00000246043 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
RRBP1-201ENST00000246043 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
RRBP1-201ENST00000246043 RALBP1Q15311 655 aa16.53■□□□□ 0.24
RRBP1-201ENST00000246043 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
RRBP1-201ENST00000246043 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
RRBP1-201ENST00000246043 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
RRBP1-201ENST00000246043 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
RRBP1-201ENST00000246043 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
RRBP1-201ENST00000246043 ZRSR1Q15695 479 aaKnown RBP16.52■□□□□ 0.24
RRBP1-201ENST00000246043 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
RRBP1-201ENST00000246043 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
RRBP1-201ENST00000246043 PDE4AP27815 886 aa16.51■□□□□ 0.23
RRBP1-201ENST00000246043 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
RRBP1-201ENST00000246043 KTN1Q86UP2 1357 aaKnown RBP16.5■□□□□ 0.23
RRBP1-201ENST00000246043 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
RRBP1-201ENST00000246043 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
RRBP1-201ENST00000246043 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
RRBP1-201ENST00000246043 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
RRBP1-201ENST00000246043 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
RRBP1-201ENST00000246043 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
RRBP1-201ENST00000246043 TMF1P82094 1093 aa16.48■□□□□ 0.23
RRBP1-201ENST00000246043 NRDCO43847 1150 aa16.47■□□□□ 0.23
RRBP1-201ENST00000246043 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
RRBP1-201ENST00000246043 KIAA2012Q0VF49 1180 aa16.47■□□□□ 0.23
RRBP1-201ENST00000246043 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
RRBP1-201ENST00000246043 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
RRBP1-201ENST00000246043 RWDD1Q9H446 243 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms