RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 TNIKQ9UKE5 1360 aa10.93□□□□□ -0.66
C1GALT1-201ENST00000223122 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
C1GALT1-201ENST00000223122 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
C1GALT1-201ENST00000223122 UPF2Q9HAU5 1272 aaKnown RBP10.91□□□□□ -0.66
C1GALT1-201ENST00000223122 EEA1Q15075 1411 aa10.91□□□□□ -0.66
C1GALT1-201ENST00000223122 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
C1GALT1-201ENST00000223122 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
C1GALT1-201ENST00000223122 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.87□□□□□ -0.67
C1GALT1-201ENST00000223122 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
C1GALT1-201ENST00000223122 SOGA1O94964 1423 aa10.87□□□□□ -0.67
C1GALT1-201ENST00000223122 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
C1GALT1-201ENST00000223122 TSPY4P0CV99 314 aa10.86□□□□□ -0.67
C1GALT1-201ENST00000223122 TSPY10P0CW01 314 aa10.86□□□□□ -0.67
C1GALT1-201ENST00000223122 ANP32BQ92688 251 aaKnown RBP10.86□□□□□ -0.67
C1GALT1-201ENST00000223122 ANP32EQ9BTT0 268 aa10.86□□□□□ -0.67
C1GALT1-201ENST00000223122 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
C1GALT1-201ENST00000223122 RGL3Q3MIN7 710 aa10.84□□□□□ -0.67
C1GALT1-201ENST00000223122 NACADO15069 1562 aa10.84□□□□□ -0.67
C1GALT1-201ENST00000223122 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
C1GALT1-201ENST00000223122 ESF1Q9H501 851 aaKnown RBP10.82□□□□□ -0.68
C1GALT1-201ENST00000223122 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
C1GALT1-201ENST00000223122 KCNH8Q96L42 1107 aa10.8□□□□□ -0.68
C1GALT1-201ENST00000223122 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
C1GALT1-201ENST00000223122 LAS1LQ9Y4W2 734 aaKnown RBP10.77□□□□□ -0.68
C1GALT1-201ENST00000223122 CARD11Q9BXL7 1154 aa10.77□□□□□ -0.69
C1GALT1-201ENST00000223122 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
C1GALT1-201ENST00000223122 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
C1GALT1-201ENST00000223122 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
C1GALT1-201ENST00000223122 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
C1GALT1-201ENST00000223122 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
C1GALT1-201ENST00000223122 CC2D1BQ5T0F9 858 aaKnown RBP10.74□□□□□ -0.69
C1GALT1-201ENST00000223122 PPP4R2Q9NY27 417 aa10.74□□□□□ -0.69
C1GALT1-201ENST00000223122 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
C1GALT1-201ENST00000223122 EIF4G1Q04637 1599 aaKnown RBP10.74□□□□□ -0.69
C1GALT1-201ENST00000223122 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
C1GALT1-201ENST00000223122 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
C1GALT1-201ENST00000223122 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
C1GALT1-201ENST00000223122 CFDP1Q9UEE9 299 aaPredicted RBP10.73□□□□□ -0.69
C1GALT1-201ENST00000223122 WIZO95785 1651 aa10.73□□□□□ -0.69
C1GALT1-201ENST00000223122 ZBTB7CA1YPR0 619 aa10.72□□□□□ -0.69
C1GALT1-201ENST00000223122 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
C1GALT1-201ENST00000223122 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
C1GALT1-201ENST00000223122 MYH16Q9H6N6 1097 aa10.71□□□□□ -0.69
C1GALT1-201ENST00000223122 BECN1Q14457 450 aa10.71□□□□□ -0.7
C1GALT1-201ENST00000223122 NOP58Q9Y2X3 529 aaKnown RBP10.71□□□□□ -0.7
C1GALT1-201ENST00000223122 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.7
C1GALT1-201ENST00000223122 RGS3P49796 1198 aa10.7□□□□□ -0.7
C1GALT1-201ENST00000223122 FOXD1Q16676 465 aa10.69□□□□□ -0.7
C1GALT1-201ENST00000223122 CUX2O14529 1486 aa10.69□□□□□ -0.7
C1GALT1-201ENST00000223122 TNNT2P45379 298 aaPredicted RBP10.69□□□□□ -0.7
C1GALT1-201ENST00000223122 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
C1GALT1-201ENST00000223122 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
C1GALT1-201ENST00000223122 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
C1GALT1-201ENST00000223122 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
C1GALT1-201ENST00000223122 PPM1GO15355 546 aaPredicted RBP10.67□□□□□ -0.7
C1GALT1-201ENST00000223122 GLIPR1L2Q4G1C9 344 aa10.66□□□□□ -0.7
C1GALT1-201ENST00000223122 RBM19Q9Y4C8 960 aaKnown RBP10.66□□□□□ -0.7
C1GALT1-201ENST00000223122 NCLP19338 710 aaKnown RBP10.66□□□□□ -0.7
C1GALT1-201ENST00000223122 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
C1GALT1-201ENST00000223122 CARMIL1Q5VZK9 1371 aa10.66□□□□□ -0.7
C1GALT1-201ENST00000223122 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.7
C1GALT1-201ENST00000223122 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
C1GALT1-201ENST00000223122 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
C1GALT1-201ENST00000223122 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
C1GALT1-201ENST00000223122 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
C1GALT1-201ENST00000223122 DCAF11Q8TEB1 546 aa10.64□□□□□ -0.71
C1GALT1-201ENST00000223122 CFAP53Q96M91 514 aa10.63□□□□□ -0.71
C1GALT1-201ENST00000223122 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
C1GALT1-201ENST00000223122 TRIM44Q96DX7 344 aaPredicted RBP10.62□□□□□ -0.71
C1GALT1-201ENST00000223122 CCER2I3L3R5 266 aa10.62□□□□□ -0.71
C1GALT1-201ENST00000223122 DEKP35659 375 aaKnown RBP10.6□□□□□ -0.71
C1GALT1-201ENST00000223122 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
C1GALT1-201ENST00000223122 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
C1GALT1-201ENST00000223122 SPRYD3Q8NCJ5 442 aa10.59□□□□□ -0.71
C1GALT1-201ENST00000223122 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
C1GALT1-201ENST00000223122 MAPK8IP3Q9UPT6 1336 aa10.57□□□□□ -0.72
C1GALT1-201ENST00000223122 A0A0G2JS52 829 aa10.57□□□□□ -0.72
C1GALT1-201ENST00000223122 GOLGA6L22H0YM25 854 aa10.57□□□□□ -0.72
C1GALT1-201ENST00000223122 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
C1GALT1-201ENST00000223122 TMF1P82094 1093 aa10.56□□□□□ -0.72
C1GALT1-201ENST00000223122 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
C1GALT1-201ENST00000223122 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
C1GALT1-201ENST00000223122 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
C1GALT1-201ENST00000223122 RAPGEF2Q9Y4G8 1499 aa10.54□□□□□ -0.72
C1GALT1-201ENST00000223122 PKD2Q13563 968 aa10.54□□□□□ -0.72
C1GALT1-201ENST00000223122 CASC1Q6TDU7 716 aa10.54□□□□□ -0.72
C1GALT1-201ENST00000223122 PTMAP06454 111 aaKnown RBP10.54□□□□□ -0.72
C1GALT1-201ENST00000223122 HSP90AB1P08238 724 aaKnown RBP10.54□□□□□ -0.72
C1GALT1-201ENST00000223122 MPHOSPH9Q99550 1183 aa10.53□□□□□ -0.72
C1GALT1-201ENST00000223122 POGKQ9P215 609 aa10.53□□□□□ -0.72
C1GALT1-201ENST00000223122 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
C1GALT1-201ENST00000223122 SAFB2Q14151 953 aaKnown RBP eCLIP10.52□□□□□ -0.73
C1GALT1-201ENST00000223122 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
C1GALT1-201ENST00000223122 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
C1GALT1-201ENST00000223122 FHOD3Q2V2M9 1422 aa10.51□□□□□ -0.73
C1GALT1-201ENST00000223122 ROCK2O75116 1388 aaKnown RBP10.51□□□□□ -0.73
C1GALT1-201ENST00000223122 TAOK2Q9UL54 1235 aa10.5□□□□□ -0.73
C1GALT1-201ENST00000223122 DNTTIP2Q5QJE6 756 aaKnown RBP10.5□□□□□ -0.73
C1GALT1-201ENST00000223122 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
C1GALT1-201ENST00000223122 DHX57Q6P158 1386 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms