RNA–Protein interactions for RNA: ENSMUST00000141557.7

Trappc13-203, Transcript of Trafficking protein particle complex subunit 13, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Trappc13, Length 3,502 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13-203ENSMUST00000141557 Map3k4O08648 1597 aa11.26□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Abcc2Q8VI47 1543 aa11.25□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Dnmt1P13864 1620 aaKnown RBP11.24□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Pdcd11Q6NS46 1862 aaKnown RBP11.24□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Cdc42bpaQ3UU96 1719 aa11.23□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Cul7Q8VE73 1689 aa11.23□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Rusc2Q80U22 1514 aa11.22□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Cux2P70298 1426 aa11.22□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Lmtk2Q3TYD6 1471 aa11.22□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Rpap1Q80TE0 1409 aa11.2□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Arap1Q4LDD4 1452 aa11.2□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Cux1P53564 1515 aa11.2□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Disp1Q3TDN0 1521 aa11.2□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Slx4Q6P1D7 1565 aa11.2□□□□□ -0.62
Trappc13-203ENSMUST00000141557 LrpprcQ6PB66 1392 aaKnown RBP11.2□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Kif15Q6P9L6 1387 aa11.18□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Rpgrip1Q9EPQ2 1331 aa11.18□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Ift140E9PY46 1464 aa11.17□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Setbp1Q9Z180 1582 aa11.17□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Rrbp1Q99PL5 1605 aaKnown RBP11.16□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Ncapd3Q6ZQK0 1506 aa11.15□□□□□ -0.62
Trappc13-203ENSMUST00000141557 Neurl4Q5NCX5 1563 aa11.14□□□□□ -0.63
Trappc13-203ENSMUST00000141557 WizO88286 1684 aaKnown RBP11.14□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Kiaa1551Q5DTW7 1521 aa11.13□□□□□ -0.63
Trappc13-203ENSMUST00000141557 BC005561E9Q5E2 1589 aa11.12□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Grin2aP35436 1464 aa11.12□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Chd1P40201 1711 aa11.1□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Carmil1Q6EDY6 1374 aa11.1□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Fam208aQ69ZR9 1610 aaKnown RBP11.1□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Soga1E1U8D0 1418 aa11.1□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Lamc1P02468 1607 aaKnown RBP11.09□□□□□ -0.63
Trappc13-203ENSMUST00000141557 Arhgef12Q8R4H2 1543 aaKnown RBP11.08□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Arhgef11Q68FM7 1552 aa11.08□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Gm1043A0A140LJC2 1431 aa11.07□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Hecw1Q8K4P8 1604 aa11.06□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Fyco1Q8VDC1 1437 aa11.06□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Acin1Q9JIX8 1338 aaKnown RBP11.05□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Dhx29Q6PGC1 1365 aaKnown RBP11.04□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Rapgef6Q5NCJ1 1609 aa11.04□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Mast1Q9R1L5 1570 aa11.03□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Wdr7Q920I9 1489 aa11.03□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Mroh2aD3Z750 1679 aa11.03□□□□□ -0.64
Trappc13-203ENSMUST00000141557 NhsB1AV60 1647 aa11.03□□□□□ -0.64
Trappc13-203ENSMUST00000141557 Rnf17Q99MV7 1640 aa11.02□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Prdm2A2A7B5 1709 aaKnown RBP11.02□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Naip1Q9QWK5 1403 aa11.02□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Kiaa0556Q8C753 1610 aa11.01□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Arhgef40Q3UPH7 1517 aa11.01□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Plb1Q3TTY0 1478 aa11□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Abca17E9PX95 1733 aa11□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Dennd4bQ3U1Y4 1499 aa10.98□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Cc2d2bA0A286YDU8 1405 aa10.98□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Mapkbp1Q6NS57 1503 aa10.97□□□□□ -0.65
Trappc13-203ENSMUST00000141557 Eea1Q8BL66 1411 aa10.95□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Gm32742A0A1B0GT42 1604 aa10.95□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Ccdc141E9Q8Q6 1531 aa10.94□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Prex2Q3LAC4 1598 aa10.94□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Trpm2Q91YD4 1506 aa10.94□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Shroom2A2ALU4 1481 aa10.93□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Abca8bQ8K440 1620 aa10.93□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Clip1Q922J3 1391 aa10.93□□□□□ -0.66
Trappc13-203ENSMUST00000141557 PxdnQ3UQ28 1475 aa10.92□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Camsap2Q8C1B1 1461 aa10.92□□□□□ -0.66
Trappc13-203ENSMUST00000141557 CntlnA2AM05 1397 aa10.91□□□□□ -0.66
Trappc13-203ENSMUST00000141557 CadpsQ80TJ1 1355 aa10.91□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Gm7298A0A0N4SVU1 1476 aa10.91□□□□□ -0.66
Trappc13-203ENSMUST00000141557 Rfx7F8VPJ6 1459 aa10.9□□□□□ -0.66
Trappc13-203ENSMUST00000141557 3425401B19RikD3Z1D3 1412 aa10.87□□□□□ -0.67
Trappc13-203ENSMUST00000141557 Cngb1E1AZ71 1325 aa10.87□□□□□ -0.67
Trappc13-203ENSMUST00000141557 Rad54l2Q99NG0 1466 aa10.86□□□□□ -0.67
Trappc13-203ENSMUST00000141557 Dnajc5bQ9CQ94 199 aa10.86□□□□□ -0.67
Trappc13-203ENSMUST00000141557 Trpm1Q2TV84 1622 aa10.84□□□□□ -0.67
Trappc13-203ENSMUST00000141557 Tmem131lQ3U3D7 1597 aa10.83□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Fmn2Q9JL04 1578 aa10.83□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Abcc3B2RX12 1523 aa10.83□□□□□ -0.68
Trappc13-203ENSMUST00000141557 SphkapQ6NSW3 1687 aa10.82□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Kdm6bQ5NCY0 1641 aa10.82□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Adcy10Q8C0T9 1614 aa10.82□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Esf1Q3V1V3 845 aaKnown RBP10.8□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Naip2Q9QUK4 1447 aa10.8□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Kidins220E9Q9B7 1793 aa10.79□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Robo2Q7TPD3 1470 aa10.79□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Cfap74Q3UY96 1578 aa10.78□□□□□ -0.68
Trappc13-203ENSMUST00000141557 NexmifQ5DTT1 1515 aa10.77□□□□□ -0.68
Trappc13-203ENSMUST00000141557 Vps8Q0P5W1 1427 aa10.77□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Cdc42bpbQ7TT50 1713 aa10.77□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Fhad1A6PWD2 1420 aa10.77□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Tubgcp6G5E8P0 1769 aa10.76□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Ubl4bQ9CQ84 188 aa10.76□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Kdm3bQ6ZPY7 1562 aa10.76□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Ankrd36D3Z4K0 1415 aa10.75□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Neo1P97798 1493 aa10.75□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Cfap65Q3V0B4 1847 aa10.74□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Abca9Q8K449 1623 aa10.74□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Iqgap1Q9JKF1 1657 aaKnown RBP10.74□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Caskin1Q6P9K8 1431 aa10.73□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Cul9Q80TT8 1865 aa10.73□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Xrn1P97789 1719 aaKnown RBP10.73□□□□□ -0.69
Trappc13-203ENSMUST00000141557 A2mQ6GQT1 1474 aa10.72□□□□□ -0.69
Trappc13-203ENSMUST00000141557 Akap12Q9WTQ5 1684 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms