RNA–Protein interactions for RNA: ENSMUST00000141557.7

Trappc13-203, Transcript of Trafficking protein particle complex subunit 13, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Trappc13, Length 3,502 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13-203ENSMUST00000141557 Gm35339A0A140LHH9 1649 aa16.35■□□□□ 0.21
Trappc13-203ENSMUST00000141557 NischQ80TM9 1593 aa15.3■□□□□ 0.04
Trappc13-203ENSMUST00000141557 Abcc9P70170 1546 aa15.24■□□□□ 0.03
Trappc13-203ENSMUST00000141557 Abcc8B2RUS7 1588 aa14.89□□□□□ -0.03
Trappc13-203ENSMUST00000141557 Ccdc180J3QNE4 1664 aa14.41□□□□□ -0.1
Trappc13-203ENSMUST00000141557 Dcaf1Q80TR8 1506 aa14.29□□□□□ -0.12
Trappc13-203ENSMUST00000141557 ScribQ80U72 1612 aa14.2□□□□□ -0.14
Trappc13-203ENSMUST00000141557 Rtl1Q7M732 1744 aa14□□□□□ -0.17
Trappc13-203ENSMUST00000141557 Crybg2B7ZCC2 1516 aa13.62□□□□□ -0.23
Trappc13-203ENSMUST00000141557 Kdm5dQ62240 1548 aa13.55□□□□□ -0.24
Trappc13-203ENSMUST00000141557 NacadQ5SWP3 1504 aa13.48□□□□□ -0.25
Trappc13-203ENSMUST00000141557 Baz1aO88379 1555 aa13.4□□□□□ -0.26
Trappc13-203ENSMUST00000141557 Rb1cc1Q9ESK9 1588 aa13.38□□□□□ -0.27
Trappc13-203ENSMUST00000141557 Zcchc6Q5BLK4 1491 aaKnown RBP13.31□□□□□ -0.28
Trappc13-203ENSMUST00000141557 Sycp2Q9CUU3 1500 aa13.29□□□□□ -0.28
Trappc13-203ENSMUST00000141557 Smarca2Q6DIC0 1577 aa13.23□□□□□ -0.29
Trappc13-203ENSMUST00000141557 BicraF8VPZ9 1578 aa13.16□□□□□ -0.3
Trappc13-203ENSMUST00000141557 Top2bQ64511 1612 aa12.68□□□□□ -0.38
Trappc13-203ENSMUST00000141557 Cttnbp2B9EJA2 1648 aa12.65□□□□□ -0.39
Trappc13-203ENSMUST00000141557 Smarca4Q3TKT4 1613 aaKnown RBP12.6□□□□□ -0.39
Trappc13-203ENSMUST00000141557 Unc13aQ4KUS2 1712 aa12.58□□□□□ -0.4
Trappc13-203ENSMUST00000141557 TnnQ80Z71 1560 aa12.51□□□□□ -0.41
Trappc13-203ENSMUST00000141557 Synj1Q8CHC4 1574 aa12.47□□□□□ -0.41
Trappc13-203ENSMUST00000141557 Thoc2B1AZI6 1594 aaKnown RBP12.47□□□□□ -0.41
Trappc13-203ENSMUST00000141557 Cecr2E9Q2Z1 1453 aa12.42□□□□□ -0.42
Trappc13-203ENSMUST00000141557 Baz1bQ9Z277 1479 aa12.41□□□□□ -0.42
Trappc13-203ENSMUST00000141557 Gpatch8A2A6A1 1505 aa12.38□□□□□ -0.43
Trappc13-203ENSMUST00000141557 Iqgap2Q3UQ44 1575 aa12.37□□□□□ -0.43
Trappc13-203ENSMUST00000141557 CftrP26361 1476 aa12.36□□□□□ -0.43
Trappc13-203ENSMUST00000141557 Wdr62Q3U3T8 1523 aa12.31□□□□□ -0.44
Trappc13-203ENSMUST00000141557 Atad2bE9Q166 1460 aaKnown RBP12.3□□□□□ -0.44
Trappc13-203ENSMUST00000141557 Eif4g1Q6NZJ6 1600 aaKnown RBP12.3□□□□□ -0.44
Trappc13-203ENSMUST00000141557 Brd4Q9ESU6 1400 aaKnown RBP12.26□□□□□ -0.45
Trappc13-203ENSMUST00000141557 Fam135aQ6NS59 1506 aa12.21□□□□□ -0.46
Trappc13-203ENSMUST00000141557 Lamc3Q9R0B6 1581 aa12.2□□□□□ -0.46
Trappc13-203ENSMUST00000141557 Pds5bQ4VA53 1446 aaKnown RBP12.18□□□□□ -0.46
Trappc13-203ENSMUST00000141557 Cc2d2aQ8CFW7 1633 aa12.17□□□□□ -0.46
Trappc13-203ENSMUST00000141557 Top2aQ01320 1528 aaKnown RBP12.11□□□□□ -0.47
Trappc13-203ENSMUST00000141557 Golga3P55937 1487 aa12.1□□□□□ -0.47
Trappc13-203ENSMUST00000141557 Rhox8Q6VSS7 320 aa12.1□□□□□ -0.47
Trappc13-203ENSMUST00000141557 Frmpd1A2AKB4 1549 aa12.09□□□□□ -0.47
Trappc13-203ENSMUST00000141557 HrcG5E8J6 738 aa12.08□□□□□ -0.48
Trappc13-203ENSMUST00000141557 Cep164Q5DU05 1446 aa11.99□□□□□ -0.49
Trappc13-203ENSMUST00000141557 Fmn1Q05860 1466 aa11.97□□□□□ -0.49
Trappc13-203ENSMUST00000141557 Camsap1A2AHC3 1581 aa11.91□□□□□ -0.5
Trappc13-203ENSMUST00000141557 Erich3F6QRE9 1637 aa11.84□□□□□ -0.51
Trappc13-203ENSMUST00000141557 Rapgef2Q8CHG7 1496 aa11.82□□□□□ -0.52
Trappc13-203ENSMUST00000141557 NrkQ9R0G8 1455 aa11.82□□□□□ -0.52
Trappc13-203ENSMUST00000141557 Rsf1E9PWW9 1441 aaKnown RBP11.8□□□□□ -0.52
Trappc13-203ENSMUST00000141557 Kif21aQ9QXL2 1672 aa11.76□□□□□ -0.53
Trappc13-203ENSMUST00000141557 Ccdc88bQ4QRL3 1481 aa11.76□□□□□ -0.53
Trappc13-203ENSMUST00000141557 Ercc6F8VPZ5 1481 aa11.75□□□□□ -0.53
Trappc13-203ENSMUST00000141557 Pbrm1Q8BSQ9 1634 aaKnown RBP11.75□□□□□ -0.53
Trappc13-203ENSMUST00000141557 AqrQ8CFQ3 1481 aaKnown RBP11.73□□□□□ -0.53
Trappc13-203ENSMUST00000141557 Map3k1P53349 1493 aa11.73□□□□□ -0.53
Trappc13-203ENSMUST00000141557 Setd1bQ8CFT2 1985 aa11.7□□□□□ -0.54
Trappc13-203ENSMUST00000141557 Peg3Q3URU2 1571 aa11.68□□□□□ -0.54
Trappc13-203ENSMUST00000141557 Trim41Q5NCC3 630 aa11.68□□□□□ -0.54
Trappc13-203ENSMUST00000141557 Lmo7E9PYF4 1699 aaKnown RBP11.66□□□□□ -0.54
Trappc13-203ENSMUST00000141557 SynmQ70IV5 1561 aa11.62□□□□□ -0.55
Trappc13-203ENSMUST00000141557 Grin2bQ01097 1482 aa11.62□□□□□ -0.55
Trappc13-203ENSMUST00000141557 Phldb1Q6PDH0 1371 aaKnown RBP11.6□□□□□ -0.55
Trappc13-203ENSMUST00000141557 Shroom4Q1W617 1475 aa11.6□□□□□ -0.55
Trappc13-203ENSMUST00000141557 Adamts12Q811B3 1600 aa11.59□□□□□ -0.55
Trappc13-203ENSMUST00000141557 EprsQ8CGC7 1512 aaKnown RBP11.56□□□□□ -0.56
Trappc13-203ENSMUST00000141557 Ccdc18Q640L5 1455 aa11.53□□□□□ -0.56
Trappc13-203ENSMUST00000141557 TchhA0A0B4J1F9 1599 aa11.52□□□□□ -0.56
Trappc13-203ENSMUST00000141557 Abca5Q8K448 1642 aa11.51□□□□□ -0.57
Trappc13-203ENSMUST00000141557 Arhgap35Q91YM2 1499 aa11.5□□□□□ -0.57
Trappc13-203ENSMUST00000141557 Samd9lQ69Z37 1561 aa11.48□□□□□ -0.57
Trappc13-203ENSMUST00000141557 Ankrd26Q811D2 1581 aa11.47□□□□□ -0.57
Trappc13-203ENSMUST00000141557 Mroh2bQ7M6Y6 1581 aa11.46□□□□□ -0.57
Trappc13-203ENSMUST00000141557 Crocc2F6XLV1 1638 aa11.43□□□□□ -0.58
Trappc13-203ENSMUST00000141557 Zcchc11B2RX14 1644 aaKnown RBP11.42□□□□□ -0.58
Trappc13-203ENSMUST00000141557 PogzQ8BZH4 1409 aaKnown RBP11.42□□□□□ -0.58
Trappc13-203ENSMUST00000141557 Lrriq1Q0P5X1 1673 aa11.42□□□□□ -0.58
Trappc13-203ENSMUST00000141557 Eif4g3Q80XI3 1579 aaKnown RBP11.41□□□□□ -0.58
Trappc13-203ENSMUST00000141557 Efcab5A0JP43 1406 aa11.41□□□□□ -0.58
Trappc13-203ENSMUST00000141557 PtprkP35822 1457 aa11.41□□□□□ -0.58
Trappc13-203ENSMUST00000141557 Mrc2Q64449 1479 aa11.4□□□□□ -0.58
Trappc13-203ENSMUST00000141557 Cep162Q6ZQ06 1403 aa11.39□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Kdm5bQ80Y84 1544 aa11.39□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Abca16E9PWJ7 1678 aa11.39□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Polr1aO35134 1717 aaKnown RBP11.38□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Pprc1Q6NZN1 1644 aa11.36□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Magi3Q9EQJ9 1476 aa11.36□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Fhod3Q76LL6 1578 aa11.36□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Urb2E9Q7L1 1524 aaKnown RBP11.35□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Arhgef5E9Q7D5 1581 aa11.35□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Ccdc136Q3TVA9 1136 aa11.35□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Gcc2Q8CHG3 1679 aa11.34□□□□□ -0.59
Trappc13-203ENSMUST00000141557 Kiaa1210E9Q0C6 1637 aa11.32□□□□□ -0.6
Trappc13-203ENSMUST00000141557 Kif21bQ9QXL1 1668 aa11.32□□□□□ -0.6
Trappc13-203ENSMUST00000141557 Tiam1Q60610 1591 aa11.31□□□□□ -0.6
Trappc13-203ENSMUST00000141557 Nup160Q9Z0W3 1402 aaKnown RBP11.29□□□□□ -0.6
Trappc13-203ENSMUST00000141557 Pla2r1Q62028 1487 aa11.28□□□□□ -0.6
Trappc13-203ENSMUST00000141557 Duox2A2AQ99 1517 aa11.28□□□□□ -0.6
Trappc13-203ENSMUST00000141557 Chic1Q8CBW7 227 aa11.28□□□□□ -0.6
Trappc13-203ENSMUST00000141557 BlmO88700 1416 aa11.27□□□□□ -0.61
Trappc13-203ENSMUST00000141557 Pcf11G3X9Z4 1553 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms