RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 CenpbP27790 599 aa21.67■■□□□ 1.06
Nup54-201ENSMUST00000038514 Grin2bQ01097 1482 aa21.67■■□□□ 1.06
Nup54-201ENSMUST00000038514 Pcf11G3X9Z4 1553 aa21.66■■□□□ 1.06
Nup54-201ENSMUST00000038514 AqrQ8CFQ3 1481 aaKnown RBP21.65■■□□□ 1.06
Nup54-201ENSMUST00000038514 Slx4Q6P1D7 1565 aa21.65■■□□□ 1.06
Nup54-201ENSMUST00000038514 Il27Q8K3I6 234 aa21.61■■□□□ 1.05
Nup54-201ENSMUST00000038514 Lmo7E9PYF4 1699 aaKnown RBP21.61■■□□□ 1.05
Nup54-201ENSMUST00000038514 Ercc6F8VPZ5 1481 aa21.56■■□□□ 1.04
Nup54-201ENSMUST00000038514 BlmO88700 1416 aa21.55■■□□□ 1.04
Nup54-201ENSMUST00000038514 Gm38655A0A286YDK6 273 aa21.54■■□□□ 1.04
Nup54-201ENSMUST00000038514 Rpap1Q80TE0 1409 aa21.49■■□□□ 1.03
Nup54-201ENSMUST00000038514 Peg3Q3URU2 1571 aa21.49■■□□□ 1.03
Nup54-201ENSMUST00000038514 Myt1Q8CFC2 1127 aa21.49■■□□□ 1.03
Nup54-201ENSMUST00000038514 Tnnt3Q9QZ47 272 aa21.46■■□□□ 1.03
Nup54-201ENSMUST00000038514 UacaQ8CGB3 1411 aa21.46■■□□□ 1.03
Nup54-201ENSMUST00000038514 Cux1P53564 1515 aa21.45■■□□□ 1.02
Nup54-201ENSMUST00000038514 Hnrnpul2Q00PI9 745 aaKnown RBP21.44■■□□□ 1.02
Nup54-201ENSMUST00000038514 3425401B19RikD3Z1D3 1412 aa21.44■■□□□ 1.02
Nup54-201ENSMUST00000038514 CntlnA2AM05 1397 aa21.43■■□□□ 1.02
Nup54-201ENSMUST00000038514 Fhad1A6PWD2 1420 aa21.4■■□□□ 1.02
Nup54-201ENSMUST00000038514 Ankrd36D3Z4K0 1415 aa21.4■■□□□ 1.02
Nup54-201ENSMUST00000038514 Carmil1Q6EDY6 1374 aa21.39■■□□□ 1.01
Nup54-201ENSMUST00000038514 Urb2E9Q7L1 1524 aaKnown RBP21.37■■□□□ 1.01
Nup54-201ENSMUST00000038514 Fyco1Q8VDC1 1437 aa21.36■■□□□ 1.01
Nup54-201ENSMUST00000038514 Fam50aQ9WV03 339 aaKnown RBP21.35■■□□□ 1.01
Nup54-201ENSMUST00000038514 Vps8Q0P5W1 1427 aa21.34■■□□□ 1.01
Nup54-201ENSMUST00000038514 Crocc2F6XLV1 1638 aa21.33■■□□□ 1.01
Nup54-201ENSMUST00000038514 Mia2Q91ZV0 1396 aa21.33■■□□□ 1
Nup54-201ENSMUST00000038514 Efcab5A0JP43 1406 aa21.32■■□□□ 1
Nup54-201ENSMUST00000038514 Dhx29Q6PGC1 1365 aaKnown RBP21.31■■□□□ 1
Nup54-201ENSMUST00000038514 NclP09405 707 aaKnown RBP21.3■■□□□ 1
Nup54-201ENSMUST00000038514 Mapk8ip2Q9ERE9 830 aa21.3■■□□□ 1
Nup54-201ENSMUST00000038514 SafbD3YXK2 937 aaKnown RBP21.29■■□□□ 1
Nup54-201ENSMUST00000038514 Lmod2Q3UHZ5 550 aa21.29■■□□□ 1
Nup54-201ENSMUST00000038514 Camsap2Q8C1B1 1461 aa21.28■■□□□ 1
Nup54-201ENSMUST00000038514 Ccer2J3QPU5 274 aa21.28■■□□□ 1
Nup54-201ENSMUST00000038514 Znf710Q3U288 666 aa21.27■■□□□ 1
Nup54-201ENSMUST00000038514 Naip2Q9QUK4 1447 aa21.26■□□□□ 0.99
Nup54-201ENSMUST00000038514 Gm1043A0A140LJC2 1431 aa21.26■□□□□ 0.99
Nup54-201ENSMUST00000038514 Cux2P70298 1426 aa21.26■□□□□ 0.99
Nup54-201ENSMUST00000038514 Gm13697A2AK42 830 aa21.25■□□□□ 0.99
Nup54-201ENSMUST00000038514 Gm7298A0A0N4SVU1 1476 aa21.24■□□□□ 0.99
Nup54-201ENSMUST00000038514 Hspa5P20029 655 aaKnown RBP21.23■□□□□ 0.99
Nup54-201ENSMUST00000038514 Cul7Q8VE73 1689 aa21.22■□□□□ 0.99
Nup54-201ENSMUST00000038514 PogzQ8BZH4 1409 aaKnown RBP21.22■□□□□ 0.99
Nup54-201ENSMUST00000038514 SynmQ70IV5 1561 aa21.22■□□□□ 0.99
Nup54-201ENSMUST00000038514 Duox2A2AQ99 1517 aa21.21■□□□□ 0.99
Nup54-201ENSMUST00000038514 Stra8P70278 393 aa21.21■□□□□ 0.99
Nup54-201ENSMUST00000038514 Phldb1Q6PDH0 1371 aaKnown RBP21.2■□□□□ 0.98
Nup54-201ENSMUST00000038514 Polr1aO35134 1717 aaKnown RBP21.19■□□□□ 0.98
Nup54-201ENSMUST00000038514 LrpprcQ6PB66 1392 aaKnown RBP21.19■□□□□ 0.98
Nup54-201ENSMUST00000038514 A2mQ6GQT1 1474 aa21.17■□□□□ 0.98
Nup54-201ENSMUST00000038514 Samd9lQ69Z37 1561 aa21.16■□□□□ 0.98
Nup54-201ENSMUST00000038514 Dennd4bQ3U1Y4 1499 aa21.15■□□□□ 0.98
Nup54-201ENSMUST00000038514 Fhod3Q76LL6 1578 aa21.15■□□□□ 0.98
Nup54-201ENSMUST00000038514 Thoc2B1AZI6 1594 aaKnown RBP21.14■□□□□ 0.98
Nup54-201ENSMUST00000038514 Ncoa2Q61026 1462 aa21.14■□□□□ 0.98
Nup54-201ENSMUST00000038514 Fam71e1A1L3C1 212 aa21.14■□□□□ 0.97
Nup54-201ENSMUST00000038514 Naip5Q9R016 1403 aa21.13■□□□□ 0.97
Nup54-201ENSMUST00000038514 Aebp1Q640N1 1128 aa21.13■□□□□ 0.97
Nup54-201ENSMUST00000038514 Npm1Q61937 292 aaKnown RBP21.1■□□□□ 0.97
Nup54-201ENSMUST00000038514 Lmtk2Q3TYD6 1471 aa21.07■□□□□ 0.96
Nup54-201ENSMUST00000038514 Kif21aQ9QXL2 1672 aa21.06■□□□□ 0.96
Nup54-201ENSMUST00000038514 Smg6P61406 1418 aaKnown RBP21.04■□□□□ 0.96
Nup54-201ENSMUST00000038514 Pprc1Q6NZN1 1644 aa21.03■□□□□ 0.96
Nup54-201ENSMUST00000038514 Gcc2Q8CHG3 1679 aa21.02■□□□□ 0.96
Nup54-201ENSMUST00000038514 Ccnb3Q810T2 1396 aa21■□□□□ 0.95
Nup54-201ENSMUST00000038514 Fam135aQ6NS59 1506 aa21■□□□□ 0.95
Nup54-201ENSMUST00000038514 Rad54l2Q99NG0 1466 aa20.99■□□□□ 0.95
Nup54-201ENSMUST00000038514 Abca5Q8K448 1642 aa20.99■□□□□ 0.95
Nup54-201ENSMUST00000038514 Ubl4bQ9CQ84 188 aa20.99■□□□□ 0.95
Nup54-201ENSMUST00000038514 Setbp1Q9Z180 1582 aa20.98■□□□□ 0.95
Nup54-201ENSMUST00000038514 Anp32aO35381 247 aa20.97■□□□□ 0.95
Nup54-201ENSMUST00000038514 Sin3aQ60520 1274 aaKnown RBP20.96■□□□□ 0.95
Nup54-201ENSMUST00000038514 EprsQ8CGC7 1512 aaKnown RBP20.94■□□□□ 0.94
Nup54-201ENSMUST00000038514 Gpatch8A2A6A1 1505 aa20.93■□□□□ 0.94
Nup54-201ENSMUST00000038514 Calr4Q3TQS0 420 aa20.92■□□□□ 0.94
Nup54-201ENSMUST00000038514 Pla2r1Q62028 1487 aa20.91■□□□□ 0.94
Nup54-201ENSMUST00000038514 NexmifQ5DTT1 1515 aa20.9■□□□□ 0.94
Nup54-201ENSMUST00000038514 Chic2Q9D9G3 165 aa20.89■□□□□ 0.94
Nup54-201ENSMUST00000038514 Rfx7F8VPJ6 1459 aa20.88■□□□□ 0.93
Nup54-201ENSMUST00000038514 BC005561E9Q5E2 1589 aa20.87■□□□□ 0.93
Nup54-201ENSMUST00000038514 CadpsQ80TJ1 1355 aa20.85■□□□□ 0.93
Nup54-201ENSMUST00000038514 Ube2uB1AUC4 352 aa20.85■□□□□ 0.93
Nup54-201ENSMUST00000038514 Kif27Q7M6Z4 1394 aa20.82■□□□□ 0.92
Nup54-201ENSMUST00000038514 Mug1P28665 1476 aa20.82■□□□□ 0.92
Nup54-201ENSMUST00000038514 Mphosph9A6H5Y1 991 aa20.82■□□□□ 0.92
Nup54-201ENSMUST00000038514 Magi3Q9EQJ9 1476 aa20.82■□□□□ 0.92
Nup54-201ENSMUST00000038514 Ncoa1P70365 1447 aa20.81■□□□□ 0.92
Nup54-201ENSMUST00000038514 Nolc1E9Q5C9 702 aaKnown RBP20.81■□□□□ 0.92
Nup54-201ENSMUST00000038514 WizO88286 1684 aaKnown RBP20.78■□□□□ 0.92
Nup54-201ENSMUST00000038514 Rprd2Q6NXI6 1469 aaKnown RBP20.77■□□□□ 0.92
Nup54-201ENSMUST00000038514 Adamts12Q811B3 1600 aa20.77■□□□□ 0.91
Nup54-201ENSMUST00000038514 Washc2Q6PGL7 1334 aa20.76■□□□□ 0.91
Nup54-201ENSMUST00000038514 Slc24a1Q91WD8 1130 aa20.74■□□□□ 0.91
Nup54-201ENSMUST00000038514 Ift140E9PY46 1464 aa20.74■□□□□ 0.91
Nup54-201ENSMUST00000038514 Kif21bQ9QXL1 1668 aa20.74■□□□□ 0.91
Nup54-201ENSMUST00000038514 Lamc1P02468 1607 aaKnown RBP20.73■□□□□ 0.91
Nup54-201ENSMUST00000038514 Usp47Q8BY87 1376 aa20.72■□□□□ 0.91
Nup54-201ENSMUST00000038514 Grin2aP35436 1464 aa20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 787.2 ms