RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 CRLF1O75462 422 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 MIAQ16674 131 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 Q6ZQT7 251 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 NFE4Q86UQ8 179 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 COX7B2Q8TF08 81 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 UBL5Q9BZL1 73 aa9.3□□□□□ -0.92
CDH1-212ENST00000611625 ZNF561-AS1K7EIQ3 104 aa9.29□□□□□ -0.92
CDH1-212ENST00000611625 APOC4P55056 127 aa9.29□□□□□ -0.92
CDH1-212ENST00000611625 A0A096LNJ9 63 aa9.29□□□□□ -0.92
CDH1-212ENST00000611625 RPL32P62910 135 aaKnown RBP9.29□□□□□ -0.92
CDH1-212ENST00000611625 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
CDH1-212ENST00000611625 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 TMEM223A0PJW6 202 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 TRAV4A0A0B4J268 109 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 TRBV10-1A0A0K0K1A3 114 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 USP9XQ93008 2570 aaPredicted RBP9.28□□□□□ -0.92
CDH1-212ENST00000611625 CHD7Q9P2D1 2997 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 GYPEP15421 78 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 KLLNB2CW77 178 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 SS18L2Q9UHA2 77 aa9.28□□□□□ -0.92
CDH1-212ENST00000611625 TLN2Q9Y4G6 2542 aa9.27□□□□□ -0.93
CDH1-212ENST00000611625 H0YGX0 51 aa9.27□□□□□ -0.93
CDH1-212ENST00000611625 RS1O15537 224 aa9.27□□□□□ -0.93
CDH1-212ENST00000611625 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
CDH1-212ENST00000611625 USP9YO00507 2555 aaPredicted RBP9.27□□□□□ -0.93
CDH1-212ENST00000611625 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
CDH1-212ENST00000611625 ORMDL1Q9P0S3 153 aa9.26□□□□□ -0.93
CDH1-212ENST00000611625 ABCA2Q9BZC7 2435 aa9.26□□□□□ -0.93
CDH1-212ENST00000611625 LINC00467Q9BRT7 94 aa9.26□□□□□ -0.93
CDH1-212ENST00000611625 ZMAT4Q9H898 229 aa9.26□□□□□ -0.93
CDH1-212ENST00000611625 CDKN2A-AS1Q9UH64 79 aa9.26□□□□□ -0.93
CDH1-212ENST00000611625 PRORYQ9H606 182 aa9.26□□□□□ -0.93
CDH1-212ENST00000611625 RAI1Q7Z5J4 1906 aaPredicted RBP9.25□□□□□ -0.93
CDH1-212ENST00000611625 HAMPP81172 84 aa9.25□□□□□ -0.93
CDH1-212ENST00000611625 PSMB8P28062 276 aa9.25□□□□□ -0.93
CDH1-212ENST00000611625 HIST2H2BCQ6DN03 193 aa9.25□□□□□ -0.93
CDH1-212ENST00000611625 Q6ZS46 218 aa9.25□□□□□ -0.93
CDH1-212ENST00000611625 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
CDH1-212ENST00000611625 HTTP42858 3142 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 UFSP1Q6NVU6 142 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 Q6YL49 198 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 Q6ZTI0 123 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
CDH1-212ENST00000611625 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 TSHBP01222 138 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
CDH1-212ENST00000611625 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 IGLV1-40P01703 118 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 PROK1P58294 105 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
CDH1-212ENST00000611625 CRYGDP07320 174 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 DEFB114Q30KQ6 69 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 C9orf85Q96MD7 179 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 COX7A2LO14548 114 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 PYGO1Q9Y3Y4 419 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 TRAV26-1A0A087WT03 109 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 CFAP126Q5VTH2 177 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
CDH1-212ENST00000611625 TEX49A0A1B0GTD5 131 aa9.21□□□□□ -0.93
CDH1-212ENST00000611625 J3QKU1 62 aa9.21□□□□□ -0.94
CDH1-212ENST00000611625 LECT2O14960 151 aa9.21□□□□□ -0.94
CDH1-212ENST00000611625 TRIAP1O43715 76 aa9.21□□□□□ -0.94
CDH1-212ENST00000611625 IGHV4-31P0DP07 118 aa9.2□□□□□ -0.94
CDH1-212ENST00000611625 C5orf42Q9H799 3197 aa9.2□□□□□ -0.94
CDH1-212ENST00000611625 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
CDH1-212ENST00000611625 IGIPA6NJ69 53 aa9.2□□□□□ -0.94
CDH1-212ENST00000611625 A0A1W2PPR1 153 aa9.2□□□□□ -0.94
CDH1-212ENST00000611625 DNAJC9-AS1A6NH13 148 aa9.2□□□□□ -0.94
CDH1-212ENST00000611625 NKAPP1Q8N9T2 125 aa9.2□□□□□ -0.94
CDH1-212ENST00000611625 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
CDH1-212ENST00000611625 ESM1Q9NQ30 184 aa9.19□□□□□ -0.94
CDH1-212ENST00000611625 ATP5G1P05496 136 aa9.19□□□□□ -0.94
CDH1-212ENST00000611625 TRACP01848 142 aa9.19□□□□□ -0.94
CDH1-212ENST00000611625 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 CRIP2P52943 208 aaPredicted RBP9.18□□□□□ -0.94
CDH1-212ENST00000611625 MRPL23Q16540 153 aaKnown RBP9.18□□□□□ -0.94
CDH1-212ENST00000611625 CHD8Q9HCK8 2581 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 IGKV3D-7A0A0C4DH55 119 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 TIRAPP58753 221 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 C9orf66Q5T8R8 295 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 LINC00308Q8TCZ7 52 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 Q9HAA7 133 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 F8WEM9 126 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 TMEM126AQ9H061 195 aa9.18□□□□□ -0.94
CDH1-212ENST00000611625 A8MZ25 164 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 NDUFA1O15239 70 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 INSL3P51460 131 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 HIST2H2BDQ6DRA6 164 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 RNF183Q96D59 192 aa9.17□□□□□ -0.94
CDH1-212ENST00000611625 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms