RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 Q9UF83 564 aa13.71□□□□□ -0.21
VIM-AS1-202ENST00000605833 PKHD1L1Q86WI1 4243 aa13.71□□□□□ -0.21
VIM-AS1-202ENST00000605833 RIGQ13278 110 aa13.7□□□□□ -0.22
VIM-AS1-202ENST00000605833 RHEBQ15382 184 aa13.7□□□□□ -0.22
VIM-AS1-202ENST00000605833 C7orf77A4D0Y5 90 aa13.69□□□□□ -0.22
VIM-AS1-202ENST00000605833 SNAPINO95295 136 aa13.69□□□□□ -0.22
VIM-AS1-202ENST00000605833 KRTAP10-4P60372 401 aaPredicted RBP13.68□□□□□ -0.22
VIM-AS1-202ENST00000605833 IMMP2LQ96T52 175 aa13.68□□□□□ -0.22
VIM-AS1-202ENST00000605833 TMEM242Q9NWH2 141 aa13.68□□□□□ -0.22
VIM-AS1-202ENST00000605833 A0A087WWC5 75 aa13.67□□□□□ -0.22
VIM-AS1-202ENST00000605833 RAB4BP61018 213 aa13.67□□□□□ -0.22
VIM-AS1-202ENST00000605833 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
VIM-AS1-202ENST00000605833 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
VIM-AS1-202ENST00000605833 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
VIM-AS1-202ENST00000605833 UBR4Q5T4S7 5183 aa13.67□□□□□ -0.22
VIM-AS1-202ENST00000605833 A0A1B0GW15 77 aa13.66□□□□□ -0.22
VIM-AS1-202ENST00000605833 F5H697 171 aa13.66□□□□□ -0.22
VIM-AS1-202ENST00000605833 ZNF56Q15929 161 aa13.66□□□□□ -0.22
VIM-AS1-202ENST00000605833 IGKV2D-24A0A075B6R9 120 aa13.65□□□□□ -0.22
VIM-AS1-202ENST00000605833 MGPP08493 103 aa13.65□□□□□ -0.22
VIM-AS1-202ENST00000605833 KCNIP4Q6PIL6 250 aa13.65□□□□□ -0.22
VIM-AS1-202ENST00000605833 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
VIM-AS1-202ENST00000605833 S100A8P05109 93 aa13.64□□□□□ -0.23
VIM-AS1-202ENST00000605833 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
VIM-AS1-202ENST00000605833 S100PP25815 95 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 ATP5L2Q7Z4Y8 100 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 CIRBP-AS1Q8TBR5 109 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 RMI2Q96E14 147 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 BTF3L4Q96K17 158 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 TMEM191AQ9H0A3 160 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 KLK12Q9UKR0 248 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 COX11Q9Y6N1 276 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 URGCP-MRPS24S4R325 110 aa13.63□□□□□ -0.23
VIM-AS1-202ENST00000605833 MRPL54Q6P161 138 aaKnown RBP13.62□□□□□ -0.23
VIM-AS1-202ENST00000605833 NIT1Q86X76 327 aa13.62□□□□□ -0.23
VIM-AS1-202ENST00000605833 Q8N976 141 aa13.62□□□□□ -0.23
VIM-AS1-202ENST00000605833 TRBV10-1A0A0K0K1A3 114 aa13.61□□□□□ -0.23
VIM-AS1-202ENST00000605833 H7C1H1 209 aa13.61□□□□□ -0.23
VIM-AS1-202ENST00000605833 CAMPP49913 170 aa13.61□□□□□ -0.23
VIM-AS1-202ENST00000605833 HBBP68871 147 aa13.61□□□□□ -0.23
VIM-AS1-202ENST00000605833 UBE2WQ96B02 151 aa13.61□□□□□ -0.23
VIM-AS1-202ENST00000605833 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
VIM-AS1-202ENST00000605833 A0A1B0GXF2 115 aa13.59□□□□□ -0.23
VIM-AS1-202ENST00000605833 SUMO4Q6EEV6 95 aa13.59□□□□□ -0.23
VIM-AS1-202ENST00000605833 OXTP01178 125 aa13.58□□□□□ -0.24
VIM-AS1-202ENST00000605833 RPL36AP83881 106 aaKnown RBP13.58□□□□□ -0.24
VIM-AS1-202ENST00000605833 RPL36ALQ969Q0 106 aaKnown RBP13.58□□□□□ -0.24
VIM-AS1-202ENST00000605833 PLA2G2DQ9UNK4 145 aa13.58□□□□□ -0.24
VIM-AS1-202ENST00000605833 M0QY20 66 aa13.57□□□□□ -0.24
VIM-AS1-202ENST00000605833 RAB4AP20338 218 aa13.56□□□□□ -0.24
VIM-AS1-202ENST00000605833 RASL11AQ6T310 242 aa13.56□□□□□ -0.24
VIM-AS1-202ENST00000605833 AMN1Q8IY45 258 aa13.56□□□□□ -0.24
VIM-AS1-202ENST00000605833 GATD1Q8NB37 220 aa13.56□□□□□ -0.24
VIM-AS1-202ENST00000605833 A0A087WX48 190 aa13.55□□□□□ -0.24
VIM-AS1-202ENST00000605833 FAM104BQ5XKR9 115 aa13.55□□□□□ -0.24
VIM-AS1-202ENST00000605833 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
VIM-AS1-202ENST00000605833 RNF185Q96GF1 192 aa13.55□□□□□ -0.24
VIM-AS1-202ENST00000605833 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
VIM-AS1-202ENST00000605833 ATRAIDQ6UW56 229 aa13.54□□□□□ -0.24
VIM-AS1-202ENST00000605833 MRAP2Q96G30 205 aa13.54□□□□□ -0.24
VIM-AS1-202ENST00000605833 NIT2Q9NQR4 276 aa13.54□□□□□ -0.24
VIM-AS1-202ENST00000605833 TRAV26-2A0A0B4J265 109 aa13.53□□□□□ -0.24
VIM-AS1-202ENST00000605833 HNRNPA3P51991 378 aaKnown RBP13.53□□□□□ -0.24
VIM-AS1-202ENST00000605833 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
VIM-AS1-202ENST00000605833 RPL37AP61513 92 aaKnown RBP13.52□□□□□ -0.25
VIM-AS1-202ENST00000605833 UBE2D3P61077 147 aa13.51□□□□□ -0.25
VIM-AS1-202ENST00000605833 UBE2D2P62837 147 aa13.51□□□□□ -0.25
VIM-AS1-202ENST00000605833 ELOBQ15370 118 aa13.51□□□□□ -0.25
VIM-AS1-202ENST00000605833 COX19Q49B96 90 aa13.51□□□□□ -0.25
VIM-AS1-202ENST00000605833 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
VIM-AS1-202ENST00000605833 MRPL51Q4U2R6 128 aaKnown RBP13.5□□□□□ -0.25
VIM-AS1-202ENST00000605833 C1orf43Q9BWL3 253 aa13.5□□□□□ -0.25
VIM-AS1-202ENST00000605833 SMCO4Q9NRQ5 59 aa13.5□□□□□ -0.25
VIM-AS1-202ENST00000605833 PPP1R17O96001 155 aa13.49□□□□□ -0.25
VIM-AS1-202ENST00000605833 C14orf177Q52M58 125 aa13.49□□□□□ -0.25
VIM-AS1-202ENST00000605833 ENHOQ6UWT2 76 aa13.49□□□□□ -0.25
VIM-AS1-202ENST00000605833 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
VIM-AS1-202ENST00000605833 HLA-DQA1P01909 254 aa13.48□□□□□ -0.25
VIM-AS1-202ENST00000605833 CKS2P33552 79 aa13.48□□□□□ -0.25
VIM-AS1-202ENST00000605833 Q0VG73 95 aa13.48□□□□□ -0.25
VIM-AS1-202ENST00000605833 TRBV24-1A0A075B6N3 115 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 USP17L23D6RBM5 183 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 CRPP02741 224 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 PPBPP02775 128 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 MPV17L2Q567V2 206 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 TMEM136Q6ZRR5 245 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 RPL39LQ96EH5 51 aaKnown RBP13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 GNB1LQ9BYB4 327 aa13.47□□□□□ -0.25
VIM-AS1-202ENST00000605833 TGIF2-C20orf24A0A0A6YYL0 155 aa13.46□□□□□ -0.25
VIM-AS1-202ENST00000605833 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
VIM-AS1-202ENST00000605833 SMKR1H3BMG3 65 aa13.46□□□□□ -0.25
VIM-AS1-202ENST00000605833 TMEM97Q5BJF2 176 aa13.46□□□□□ -0.25
VIM-AS1-202ENST00000605833 ST20Q9HBF5 79 aa13.46□□□□□ -0.25
VIM-AS1-202ENST00000605833 GAS8-AS1O95177 125 aa13.45□□□□□ -0.26
VIM-AS1-202ENST00000605833 NCR2O95944 276 aa13.45□□□□□ -0.26
VIM-AS1-202ENST00000605833 TRBV6-8A0A0A6YYG3 113 aa13.44□□□□□ -0.26
VIM-AS1-202ENST00000605833 D6R8Y8 96 aa13.44□□□□□ -0.26
VIM-AS1-202ENST00000605833 MT-ND6P03923 174 aa13.44□□□□□ -0.26
VIM-AS1-202ENST00000605833 ANGP03950 147 aaKnown RBP13.44□□□□□ -0.26
VIM-AS1-202ENST00000605833 PRSS1P07477 247 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms