RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 LINC01356Q8N9X3 169 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 MRAPQ8TCY5 172 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 ZNF580Q9UK33 172 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 ZFYVE26Q68DK2 2539 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 A0A0J9YXV3 536 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 KLLNB2CW77 178 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 LY6HO94772 140 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 MT-ATP8P03928 68 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 IGHV3-30-3P0DP02 117 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 LRRC75A-AS1Q8N1F1 130 aa2.67□□□□□ -1.98
VMP1-216ENST00000592790 IGHV3-16A0A0C4DH30 117 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 IGIPA6NJ69 53 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 F8W735 103 aaPredicted RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 COX6B1P14854 86 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 ZNF22P17026 224 aaPredicted RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 TIRAPP58753 221 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 RPL39P62891 51 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 DAZ2Q13117 558 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 PRR30Q53SZ7 412 aaPredicted RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 RUSC1-AS1Q66K80 236 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 C11orf71Q6IPW1 123 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 DAZ4Q86SG3 579 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 DAZ3Q9NR90 486 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 PTPRBP23467 1997 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 KALRNO60229 2985 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 PCNX1Q96RV3 2341 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TRBV10-1A0A0K0K1A3 114 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TRACP01848 142 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 NBL1P41271 181 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 LINC00158P58513 81 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 GAGE2AQ6NT46 116 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 BRD3OSQ6XYD6 125 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 C22orf34Q6ZV56 151 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 Q8NA96 180 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 AJUBAQ96IF1 538 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TMEM243Q9BU79 118 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 C11orf21Q9P2W6 132 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 PRR14LQ5THK1 2151 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TRGV2A0A075B6R0 118 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 CLPSL1A2RUU4 121 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 A6NDX4 124 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 COX7A2LO14548 114 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 POM121L12Q8N7R1 296 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TMEM263Q8WUH6 116 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 C9orf85Q96MD7 179 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 ACACAQ13085 2346 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TRRAPQ9Y4A5 3859 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 IGLV4-3A0A075B6K6 122 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 M0QY20 66 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 BAALC-AS2P0C853 105 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 RNASE3P12724 160 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 ZFP36P26651 326 aaKnown RBP2.66□□□□□ -1.98
VMP1-216ENST00000592790 SYNJ2BPP57105 145 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 DEFB131AP59861 70 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 FAM222AQ5U5X8 452 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 APRG1Q8IVJ8 170 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 VSIG2Q96IQ7 327 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 TOMM7Q9P0U1 55 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 SS18L2Q9UHA2 77 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 DSCAML1Q8TD84 2053 aa2.66□□□□□ -1.98
VMP1-216ENST00000592790 ZGRF1Q86YA3 2104 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 IGHV3OR16-12A0A075B7B8 117 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 TRGV4A0A0C4DH28 118 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 F6UB75 175 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 H7C423 109 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 UQCRQO14949 82 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 NDUFA1O15239 70 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 CXCL5P42830 114 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 XGP55808 180 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 UBE2E2Q96LR5 201 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 VPREB3Q9UKI3 123 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 MYO9AB2RTY4 2548 aa2.65□□□□□ -1.98
VMP1-216ENST00000592790 OTOGLQ3ZCN5 2332 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 TRGV1A0A0A0MS02 117 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 J3KT08 172 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 LST1O00453 97 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 PAX4O43316 350 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 NPC2P61916 151 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 MRPS36P82909 103 aaKnown RBP2.65□□□□□ -1.99
VMP1-216ENST00000592790 SS18Q15532 418 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 SBSPONQ8IVN8 264 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 C20orf173Q96LM9 149 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 Q9H8V8 135 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 EDA2RQ9HAV5 297 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 PRO0461Q9UI25 63 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 JMJD7-PLA2G4BH0Y9G9 81 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 K7EQG2 157 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 LMO4P61968 165 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 ATP5EP2Q5VTU8 51 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 SMIM20Q8N5G0 67 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 DAND5Q8N907 189 aa2.65□□□□□ -1.99
VMP1-216ENST00000592790 IGLV4-69A0A075B6H9 119 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 TRAV12-2A0A075B6T6 113 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 IGHV3-73A0A0B4J1V6 119 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 TRAV13-1A0A0B4J241 112 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 ADORA2A-AS1P86434 159 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 UNQ9165/PRO28630Q6UXU0 137 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 CHCHD5Q9BSY4 110 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 UBL5Q9BZL1 73 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 CSDC2Q9Y534 153 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms