RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GUCA1AP43080 201 aaPredicted RBP-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 ARPC4P59998 168 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 CCL8P80075 99 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 CFAP126Q5VTH2 177 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 ZNF818PQ6ZRF7 136 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 UBE2DNLQ8IWF7 75 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 PCLOQ9Y6V0 5065 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 ALMS1Q8TCU4 4167 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 CFTRP13569 1480 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 TRAV13-2A0A0B4J235 113 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 SIX6O95475 246 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 PPP1R17O96001 155 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 Q6AWC8 147 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 CNFNQ9BYD5 112 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 LINC00474Q9P2X8 69 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 PRO0255Q9UI72 69 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 CHD6Q8TD26 2715 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 LRRC37A3O60309 1634 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 LRP6O75581 1613 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 FAM208BQ5VWN6 2430 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 ROBO1Q9Y6N7 1651 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 SPTBN2O15020 2390 aa-0.14□□□□□ -2.43
TOP2A-202ENST00000577541 PXDNQ92626 1479 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 NWD2Q9ULI1 1742 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 SHROOM2Q13796 1616 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 BIVM-ERCC5R4GMW8 1640 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 A6NIN4 97 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 K7EP13 123 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 M0R135 149 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 BCE1O60756 84 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 IFNA17P01571 189 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 MEIG1Q5JSS6 88 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 BAGE3Q86Y29 109 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 ARL11Q969Q4 196 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 TCEAL4Q96EI5 215 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 LINC00472Q9H8W2 130 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 SERP1Q9Y6X1 66 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 U3KQA8 63 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 NCOR1O75376 2440 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 PTPRQQ9UMZ3 2332 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 FLNCQ14315 2725 aa-0.15□□□□□ -2.43
TOP2A-202ENST00000577541 MIF4GDA9UHW6 222 aaKnown RBP-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 C10orf128Q5T292 105 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 Q5VV11 94 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 TTC9CQ8N5M4 171 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 FAM213BQ8TBF2 198 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 AMELXQ99217 191 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 SNRNP25Q9BV90 132 aaKnown RBP-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 NDUFA4L2Q9NRX3 87 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 SCN3BQ9NY72 215 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 CCDC167Q9P0B6 97 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 PATJQ8NI35 1801 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 C2CD3Q4AC94 2353 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 LRP1BQ9NZR2 4599 aa-0.16□□□□□ -2.44
TOP2A-202ENST00000577541 VWFP04275 2813 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 ABCA2Q9BZC7 2435 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 STAB1Q9NY15 2570 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 FAM25AB3EWG3 89 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 FAM25CB3EWG5 89 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 FAM25GB3EWG6 89 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 I3L2K1 104 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 PRM1P04553 51 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 ARHGEF5Q12774 1597 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 AKAP6Q13023 2319 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 CCDC58Q4VC31 144 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 CYP4F30PQ9H0H9 118 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 RERGLQ9H628 205 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 NPVFQ9HCQ7 196 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 PKD1L1Q8TDX9 2849 aa-0.17□□□□□ -2.44
TOP2A-202ENST00000577541 ROCK2O75116 1388 aaKnown RBP-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 PRKDCP78527 4128 aaKnown RBP-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 BSNQ9UPA5 3926 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 ZNF609O15014 1411 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 CPSF1Q10570 1443 aaKnown RBP-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 CTXND1A0A1B0GTU2 59 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 A0A1B0GV90 55 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 OOSP1A8MZH6 123 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 S100A12P80511 92 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 CATR1Q13166 79 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 V9GYH0 126 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 BCL9LQ86UU0 1499 aa-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 RIMS1Q86UR5 1692 aaKnown RBP-0.18□□□□□ -2.44
TOP2A-202ENST00000577541 PPIP5K1Q6PFW1 1433 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 SELENOWP63302 87 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 SPAG11BQ08648 103 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 SPAG11AQ6PDA7 123 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 SCP2D1Q9UJQ7 156 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 LENEPQ9Y5L5 61 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 RNF213Q63HN8 5207 aa-0.19□□□□□ -2.44
TOP2A-202ENST00000577541 PLXNB2O15031 1838 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 CUL7Q14999 1698 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 PPRC1Q5VV67 1664 aaKnown RBP-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 KIF21AQ7Z4S6 1674 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 C10orf142B7Z368 130 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 M0R3E3 92 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 HMGN1P05114 100 aa-0.2□□□□□ -2.44
TOP2A-202ENST00000577541 TSC22D3Q99576 134 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms