RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 IGLC3P0DOY3 106 aa12.5□□□□□ -0.41
HERC2-208ENST00000566635 DAD1P61803 113 aa12.5□□□□□ -0.41
HERC2-208ENST00000566635 STPG4Q8N801 248 aa12.5□□□□□ -0.41
HERC2-208ENST00000566635 LOC100131303A0A0U1RQF7 123 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 NUDT3O95989 172 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 SPART-AS1P0CW21 52 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 COTL1Q14019 142 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 KRTAP21-3Q3LHN1 58 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 HUWE1Q7Z6Z7 4374 aaKnown RBP12.49□□□□□ -0.41
HERC2-208ENST00000566635 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 CIDEAO60543 219 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 TSHBP01222 138 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 ORMDL2Q53FV1 153 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 PHLDA1Q8WV24 401 aaPredicted RBP12.49□□□□□ -0.41
HERC2-208ENST00000566635 DNAJC30Q96LL9 226 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
HERC2-208ENST00000566635 I3L3M4 83 aa12.48□□□□□ -0.41
HERC2-208ENST00000566635 CCL25O15444 150 aa12.48□□□□□ -0.41
HERC2-208ENST00000566635 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
HERC2-208ENST00000566635 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
HERC2-208ENST00000566635 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 MRPS16Q9Y3D3 137 aaKnown RBP12.47□□□□□ -0.41
HERC2-208ENST00000566635 TRBV10-1A0A0K0K1A3 114 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 K7EMI3 77 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 GAGE4Q13068 117 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 GAGE5Q13069 117 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 UBE2V1Q13404 147 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
HERC2-208ENST00000566635 TRBV7-3A0A075B6L6 115 aa12.46□□□□□ -0.41
HERC2-208ENST00000566635 RHOHQ15669 191 aa12.46□□□□□ -0.41
HERC2-208ENST00000566635 SPATA12Q7Z6I5 190 aa12.46□□□□□ -0.41
HERC2-208ENST00000566635 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
HERC2-208ENST00000566635 HSPB8Q9UJY1 196 aa12.46□□□□□ -0.41
HERC2-208ENST00000566635 A0A0J9YWU9 116 aa12.46□□□□□ -0.42
HERC2-208ENST00000566635 PTTG1IPP53801 180 aa12.46□□□□□ -0.42
HERC2-208ENST00000566635 RPL36AP83881 106 aaKnown RBP12.46□□□□□ -0.42
HERC2-208ENST00000566635 RPL36ALQ969Q0 106 aaKnown RBP12.46□□□□□ -0.42
HERC2-208ENST00000566635 C11orf68Q9H3H3 251 aaKnown RBP12.46□□□□□ -0.42
HERC2-208ENST00000566635 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
HERC2-208ENST00000566635 HNRNPA3P51991 378 aaKnown RBP12.44□□□□□ -0.42
HERC2-208ENST00000566635 COX11Q9Y6N1 276 aa12.44□□□□□ -0.42
HERC2-208ENST00000566635 H0Y8G0 127 aa12.44□□□□□ -0.42
HERC2-208ENST00000566635 UBE2D3P61077 147 aa12.44□□□□□ -0.42
HERC2-208ENST00000566635 UBE2D2P62837 147 aa12.44□□□□□ -0.42
HERC2-208ENST00000566635 C2orf66Q6UXQ4 117 aa12.44□□□□□ -0.42
HERC2-208ENST00000566635 Q6ZN92 141 aa12.44□□□□□ -0.42
HERC2-208ENST00000566635 DNAH9Q9NYC9 4486 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 ATP5G1P05496 136 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 CRYBA4P53673 196 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
HERC2-208ENST00000566635 C12orf74Q32Q52 190 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 PRADC1Q9BSG0 188 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 HTN3P15516 51 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 IFI27L1Q96BM0 104 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
HERC2-208ENST00000566635 TEX48A0A1B0GUV7 120 aa12.42□□□□□ -0.42
HERC2-208ENST00000566635 SYS1-DBNDD2H3BUS1 97 aa12.42□□□□□ -0.42
HERC2-208ENST00000566635 PRO0255Q9UI72 69 aa12.41□□□□□ -0.42
HERC2-208ENST00000566635 LINC00694P0DN24 101 aa12.41□□□□□ -0.42
HERC2-208ENST00000566635 CYSLTR1Q9Y271 337 aa12.41□□□□□ -0.42
HERC2-208ENST00000566635 A0A0J9YY99 117 aa12.4□□□□□ -0.42
HERC2-208ENST00000566635 GYPEP15421 78 aa12.4□□□□□ -0.42
HERC2-208ENST00000566635 COL7A1Q02388 2944 aa12.4□□□□□ -0.42
HERC2-208ENST00000566635 F5H768 121 aa12.4□□□□□ -0.43
HERC2-208ENST00000566635 DAZ4Q86SG3 579 aaKnown RBP12.39□□□□□ -0.43
HERC2-208ENST00000566635 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
HERC2-208ENST00000566635 VSIG2Q96IQ7 327 aa12.39□□□□□ -0.43
HERC2-208ENST00000566635 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
HERC2-208ENST00000566635 CHCHD7Q9BUK0 85 aa12.39□□□□□ -0.43
HERC2-208ENST00000566635 DAZ3Q9NR90 486 aaKnown RBP12.39□□□□□ -0.43
HERC2-208ENST00000566635 PAX4O43316 350 aa12.38□□□□□ -0.43
HERC2-208ENST00000566635 Q6ZTC4 211 aa12.38□□□□□ -0.43
HERC2-208ENST00000566635 MEGF8Q7Z7M0 2845 aa12.38□□□□□ -0.43
HERC2-208ENST00000566635 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
HERC2-208ENST00000566635 PMCHL2Q9BQD1 86 aa12.38□□□□□ -0.43
HERC2-208ENST00000566635 ATP5LO75964 103 aa12.37□□□□□ -0.43
HERC2-208ENST00000566635 NANOS2P60321 138 aaKnown RBP12.37□□□□□ -0.43
HERC2-208ENST00000566635 NTM-AS1Q6ZSK4 140 aa12.37□□□□□ -0.43
HERC2-208ENST00000566635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.37□□□□□ -0.43
HERC2-208ENST00000566635 IGKV2-29A2NJV5 120 aaPredicted RBP12.37□□□□□ -0.43
HERC2-208ENST00000566635 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
HERC2-208ENST00000566635 ZMAT4Q9H898 229 aa12.37□□□□□ -0.43
HERC2-208ENST00000566635 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
HERC2-208ENST00000566635 ATOH7Q8N100 152 aa12.36□□□□□ -0.43
HERC2-208ENST00000566635 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 A0A096LPF7 62 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 ERASQ7Z444 233 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 C11orf45Q8TAV5 145 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 PRSS1P07477 247 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 LINC01545Q5VT33 79 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
HERC2-208ENST00000566635 HINT1P49773 126 aaPredicted RBP12.34□□□□□ -0.43
HERC2-208ENST00000566635 PRKDCP78527 4128 aaKnown RBP12.34□□□□□ -0.43
HERC2-208ENST00000566635 BAALCQ8WXS3 180 aa12.34□□□□□ -0.43
HERC2-208ENST00000566635 OPRPNQ99935 248 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms