RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 C12orf74Q32Q52 190 aa8.59□□□□□ -1.03
HERC1-214ENST00000561400 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
HERC1-214ENST00000561400 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
HERC1-214ENST00000561400 PGPA6NDG6 321 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 F6UB75 175 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 PFN2P35080 140 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 GDF5OSQ5U4N7 250 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 AAMDCQ9H7C9 122 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 PRAC2D3DTV9 90 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 ATP5G3P48201 142 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
HERC1-214ENST00000561400 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 C9JCJ5 164 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 STHQ8IWL8 128 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 ANKRD29Q8N6D5 301 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 OTORQ9NRC9 128 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 A8MWV9 139 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
HERC1-214ENST00000561400 ZNF493Q6ZR52 646 aa8.57□□□□□ -1.04
HERC1-214ENST00000561400 TRAV8-1A0A0A6YYK1 113 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
HERC1-214ENST00000561400 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 MEGF8Q7Z7M0 2845 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 K7EIL1 84 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
HERC1-214ENST00000561400 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
HERC1-214ENST00000561400 OSTCQ9NRP0 149 aa8.56□□□□□ -1.04
HERC1-214ENST00000561400 A0A0J9YX75 114 aa8.55□□□□□ -1.04
HERC1-214ENST00000561400 ATP5G1P05496 136 aa8.55□□□□□ -1.04
HERC1-214ENST00000561400 OR8A1Q8NGG7 326 aa8.55□□□□□ -1.04
HERC1-214ENST00000561400 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
HERC1-214ENST00000561400 IGKV2-40A0A087WW87 121 aaPredicted RBP8.54□□□□□ -1.04
HERC1-214ENST00000561400 H3BMM0 161 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 IGKV2D-40P01614 121 aaPredicted RBP8.54□□□□□ -1.04
HERC1-214ENST00000561400 IGHV4-30-4P0DP06 118 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 DPM2O94777 84 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 HLA-DRB4P13762 266 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 COX7CP15954 63 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 C2orf48Q96LS8 159 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 EPDR1Q9UM22 224 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 HLA-DRB4X5D2U9 266 aa8.54□□□□□ -1.04
HERC1-214ENST00000561400 IGKV3-20P01619 116 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 TRACP01848 142 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 ERCC8Q13216 396 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 RBMY1BA6NDE4 496 aaKnown RBP8.53□□□□□ -1.04
HERC1-214ENST00000561400 RBMY1EA6NEQ0 496 aaKnown RBP8.53□□□□□ -1.04
HERC1-214ENST00000561400 TCRAP04437 139 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 RBMY1DP0C7P1 496 aaKnown RBP8.53□□□□□ -1.04
HERC1-214ENST00000561400 IMUPQ9GZP8 106 aa8.53□□□□□ -1.04
HERC1-214ENST00000561400 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 LGALS9BQ3B8N2 356 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 LGALS9CQ6DKI2 356 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 AGPAT4-IT1Q9H0P7 198 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 NBEAL2Q6ZNJ1 2754 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 A8MTW9 85 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 NCR2O95944 276 aa8.52□□□□□ -1.05
HERC1-214ENST00000561400 PEX7O00628 323 aa8.51□□□□□ -1.05
HERC1-214ENST00000561400 LINC00322Q6ZN03 302 aaPredicted RBP8.51□□□□□ -1.05
HERC1-214ENST00000561400 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
HERC1-214ENST00000561400 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 PSMB2P49721 201 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 DEFB121Q5J5C9 76 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 HHLA3Q9XRX5 114 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 IGLV2-11P01706 119 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 Q8TAT8 98 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 C11orf52Q96A22 123 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 DSCR8Q96T75 97 aa8.5□□□□□ -1.05
HERC1-214ENST00000561400 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
HERC1-214ENST00000561400 CD164Q04900 197 aa8.49□□□□□ -1.05
HERC1-214ENST00000561400 GIG44P09565 113 aaPredicted RBP8.49□□□□□ -1.05
HERC1-214ENST00000561400 FXYD7P58549 80 aa8.49□□□□□ -1.05
HERC1-214ENST00000561400 SRSF9Q13242 221 aaKnown RBP eCLIP8.49□□□□□ -1.05
HERC1-214ENST00000561400 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
HERC1-214ENST00000561400 TMSB15BA0A087X1C1 80 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 ZNF138P52744 262 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 SPINK13Q1W4C9 94 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 H7C1H1 209 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 LTAP01374 205 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 UBE2D3P61077 147 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 UBE2D2P62837 147 aa8.48□□□□□ -1.05
HERC1-214ENST00000561400 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
HERC1-214ENST00000561400 PRKDCP78527 4128 aaKnown RBP8.47□□□□□ -1.05
HERC1-214ENST00000561400 K7EMI3 77 aa8.46□□□□□ -1.05
HERC1-214ENST00000561400 IGKCP01834 107 aa8.46□□□□□ -1.05
HERC1-214ENST00000561400 ATP5L2Q7Z4Y8 100 aa8.46□□□□□ -1.05
HERC1-214ENST00000561400 PRNTQ86SH4 94 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms