RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 TSHBP01222 138 aa13.94□□□□□ -0.18
PDE8A-211ENST00000559742 RNASE3P12724 160 aaKnown RBP13.94□□□□□ -0.18
PDE8A-211ENST00000559742 C18orf65Q6ZTR6 163 aa13.94□□□□□ -0.18
PDE8A-211ENST00000559742 TMEM263Q8WUH6 116 aaKnown RBP13.94□□□□□ -0.18
PDE8A-211ENST00000559742 AMELXQ99217 191 aa13.94□□□□□ -0.18
PDE8A-211ENST00000559742 MDFICQ9P1T7 246 aa13.94□□□□□ -0.18
PDE8A-211ENST00000559742 J3QLI3 93 aa13.93□□□□□ -0.18
PDE8A-211ENST00000559742 LINC01620Q4KN68 170 aa13.93□□□□□ -0.18
PDE8A-211ENST00000559742 Q96MF0 132 aa13.93□□□□□ -0.18
PDE8A-211ENST00000559742 ELANEP08246 267 aa13.93□□□□□ -0.18
PDE8A-211ENST00000559742 LINC01600Q96MT4 127 aa13.93□□□□□ -0.18
PDE8A-211ENST00000559742 H7C2G1 150 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 K7EMT4 169 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 ID1P41134 155 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 JPT2Q9H910 190 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 ATXN8Q156A1 80 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 Q6YL49 198 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 DPH3P1Q9H4G8 78 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 ZNF702PQ9H963 129 aa13.92□□□□□ -0.18
PDE8A-211ENST00000559742 DUX3Q96PT4 197 aa13.91□□□□□ -0.18
PDE8A-211ENST00000559742 DEFB113Q30KQ7 82 aa13.91□□□□□ -0.18
PDE8A-211ENST00000559742 ITPR2Q14571 2701 aa13.91□□□□□ -0.18
PDE8A-211ENST00000559742 MTORP42345 2549 aa13.9□□□□□ -0.18
PDE8A-211ENST00000559742 A0A0B4J2C4 111 aa13.9□□□□□ -0.18
PDE8A-211ENST00000559742 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
PDE8A-211ENST00000559742 PMVKQ15126 192 aa13.9□□□□□ -0.18
PDE8A-211ENST00000559742 HIST2H2BCQ6DN03 193 aa13.9□□□□□ -0.18
PDE8A-211ENST00000559742 TMEM170BQ5T4T1 132 aa13.9□□□□□ -0.18
PDE8A-211ENST00000559742 LGALS9O00182 355 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 TP53TG1Q9Y2A0 90 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 TRAV2A0A0B4J234 112 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 IGIPA6NJ69 53 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 KLLNB2CW77 178 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 H3BMM0 161 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 J3QQQ9 107 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 UBE2WQ96B02 151 aa13.89□□□□□ -0.19
PDE8A-211ENST00000559742 A0A087WWL8 130 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 TRBV10-2A0A0K0K1G8 114 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 SPINK13Q1W4C9 94 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 KHDC1LQ5JSQ8 128 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 SLURP1P55000 103 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 ZNRF2Q8NHG8 242 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 ZNF580Q9UK33 172 aa13.88□□□□□ -0.19
PDE8A-211ENST00000559742 LGALS3P17931 250 aaKnown RBP13.87□□□□□ -0.19
PDE8A-211ENST00000559742 APRG1Q8IVJ8 170 aa13.87□□□□□ -0.19
PDE8A-211ENST00000559742 SNRPD3P62318 126 aaKnown RBP13.87□□□□□ -0.19
PDE8A-211ENST00000559742 Q1RN00 199 aa13.87□□□□□ -0.19
PDE8A-211ENST00000559742 NOTCH3Q9UM47 2321 aa13.86□□□□□ -0.19
PDE8A-211ENST00000559742 FSHBP01225 129 aa13.86□□□□□ -0.19
PDE8A-211ENST00000559742 MRPL23Q16540 153 aaKnown RBP13.86□□□□□ -0.19
PDE8A-211ENST00000559742 FAM74A4Q5TZK3 123 aa13.86□□□□□ -0.19
PDE8A-211ENST00000559742 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
PDE8A-211ENST00000559742 CHCHD5Q9BSY4 110 aa13.85□□□□□ -0.19
PDE8A-211ENST00000559742 HTN1P15515 57 aa13.85□□□□□ -0.19
PDE8A-211ENST00000559742 TMEM126AQ9H061 195 aa13.85□□□□□ -0.19
PDE8A-211ENST00000559742 A0A0J9YX75 114 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 F5H697 171 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 K7EQG2 157 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 PPP1R17O96001 155 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 RPL39P62891 51 aaKnown RBP13.84□□□□□ -0.19
PDE8A-211ENST00000559742 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 LINC01587Q99440 93 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 PPDPFQ9H3Y8 114 aa13.84□□□□□ -0.19
PDE8A-211ENST00000559742 HELZ2Q9BYK8 2649 aaKnown RBP13.84□□□□□ -0.19
PDE8A-211ENST00000559742 ZNF876PQ49A33 203 aa13.83□□□□□ -0.19
PDE8A-211ENST00000559742 C3orf56Q8N813 242 aa13.83□□□□□ -0.19
PDE8A-211ENST00000559742 TMEM141Q96I45 108 aa13.83□□□□□ -0.19
PDE8A-211ENST00000559742 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.2
PDE8A-211ENST00000559742 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.82□□□□□ -0.2
PDE8A-211ENST00000559742 TRBV30A0A0K0K1B3 111 aa13.82□□□□□ -0.2
PDE8A-211ENST00000559742 TRIAP1O43715 76 aa13.82□□□□□ -0.2
PDE8A-211ENST00000559742 C2orf82Q6UX34 121 aa13.82□□□□□ -0.2
PDE8A-211ENST00000559742 C11orf44Q8N8P7 122 aa13.82□□□□□ -0.2
PDE8A-211ENST00000559742 WFDC11Q8NEX6 87 aa13.82□□□□□ -0.2
PDE8A-211ENST00000559742 TIMM17AQ99595 171 aa13.82□□□□□ -0.2
PDE8A-211ENST00000559742 TMEM89A2RUT3 159 aa13.81□□□□□ -0.2
PDE8A-211ENST00000559742 ZNF56Q15929 161 aa13.81□□□□□ -0.2
PDE8A-211ENST00000559742 KMT2BQ9UMN6 2715 aaPredicted RBP13.81□□□□□ -0.2
PDE8A-211ENST00000559742 KNCNA6PVL3 124 aa13.8□□□□□ -0.2
PDE8A-211ENST00000559742 KRTAP1-3Q8IUG1 177 aa13.8□□□□□ -0.2
PDE8A-211ENST00000559742 H7C423 109 aa13.8□□□□□ -0.2
PDE8A-211ENST00000559742 LEPROTO15243 131 aa13.8□□□□□ -0.2
PDE8A-211ENST00000559742 PRM2P04554 102 aa13.8□□□□□ -0.2
PDE8A-211ENST00000559742 TRBV7-7A0A0K0K1E9 115 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 FAM240AA0A1B0GVK7 77 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 LINC00315P59091 139 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 KIF25-AS1Q9Y6Z4 181 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 SUMO4Q6EEV6 95 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 POM121L12Q8N7R1 296 aa13.79□□□□□ -0.2
PDE8A-211ENST00000559742 POLR2KP53803 58 aaKnown RBP13.78□□□□□ -0.2
PDE8A-211ENST00000559742 TMEM223A0PJW6 202 aa13.78□□□□□ -0.2
PDE8A-211ENST00000559742 H3BT86 120 aa13.78□□□□□ -0.2
PDE8A-211ENST00000559742 IGHV3-16A0A0C4DH30 117 aa13.77□□□□□ -0.21
PDE8A-211ENST00000559742 DEFB131AP59861 70 aa13.77□□□□□ -0.21
PDE8A-211ENST00000559742 PDZD2O15018 2839 aa13.77□□□□□ -0.21
PDE8A-211ENST00000559742 M0R2P5 195 aa13.77□□□□□ -0.21
PDE8A-211ENST00000559742 NXPH4O95158 308 aa13.76□□□□□ -0.21
PDE8A-211ENST00000559742 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms