RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 COL12A1Q99715 3063 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 TRAV17A0A0B4J275 112 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 TCRBV4S1A1TA0A5B7 111 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 C2orf70A6NJV1 201 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 G3V3Q6 166 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 PSCAO43653 123 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 ERC2-IT1O76042 136 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 IGKCP01834 107 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 CBLN1P23435 193 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
FOXN3-217ENST00000557572 PEA15Q15121 130 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 SLC48A1Q6P1K1 146 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 ALKAL2Q6UX46 152 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 ZNF833PQ6ZTB9 187 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 ZNF720Q7Z2F6 126 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 COMMD6Q7Z4G1 85 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 HMGN2P46Q86SG4 172 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 CLECL1Q8IZS7 167 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 Q9BRP9 147 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 MYO15AQ9UKN7 3530 aa1.84□□□□□ -2.12
FOXN3-217ENST00000557572 PCNX2A6NKB5 2137 aa1.84□□□□□ -2.12
FOXN3-217ENST00000557572 SPTAN1Q13813 2472 aaKnown RBP1.83□□□□□ -2.12
FOXN3-217ENST00000557572 LAMB2P55268 1798 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 HEATR5BQ9P2D3 2071 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 PATJQ8NI35 1801 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 KIF20BQ96Q89 1820 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 SMIM31A0A1B0GVY4 71 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 SFT2D2O95562 160 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 CXCL8P10145 99 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 HINT1P49773 126 aaPredicted RBP1.83□□□□□ -2.12
FOXN3-217ENST00000557572 ERHP84090 104 aaKnown RBP1.83□□□□□ -2.12
FOXN3-217ENST00000557572 MOBPQ13875 183 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 Q1T7F1 81 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 C6orf52Q5T4I8 152 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.83□□□□□ -2.12
FOXN3-217ENST00000557572 TSLPQ969D9 159 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 REG4Q9BYZ8 158 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 PLXNC1O60486 1568 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 FLNCQ14315 2725 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 CELSR3Q9NYQ7 3312 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 RP1L1Q8IWN7 2480 aaPredicted RBP1.83□□□□□ -2.12
FOXN3-217ENST00000557572 CNOT1A5YKK6 2376 aaKnown RBP1.83□□□□□ -2.12
FOXN3-217ENST00000557572 CLIP1P30622 1438 aa1.83□□□□□ -2.12
FOXN3-217ENST00000557572 PXDNQ92626 1479 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 NRXN1Q9ULB1 1477 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 SETD2Q9BYW2 2564 aaPredicted RBP1.82□□□□□ -2.12
FOXN3-217ENST00000557572 NRXN3Q9Y4C0 1643 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 IGLV3-16A0A075B6K0 115 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 TRAV40A0A0B4J280 105 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 TRBV7-7A0A0K0K1E9 115 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 IGLC7A0M8Q6 106 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 CYB5AP00167 134 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 ASIPP42127 132 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 PYDC2Q56P42 97 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
FOXN3-217ENST00000557572 SPTSSBQ8NFR3 76 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 FAM213BQ8TBF2 198 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 CCL26Q9Y258 94 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 QSER1Q2KHR3 1735 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 FMN2Q9NZ56 1722 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 DMDP11532 3685 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 COL14A1Q05707 1796 aaKnown RBP1.82□□□□□ -2.12
FOXN3-217ENST00000557572 PAPPA2Q9BXP8 1791 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 DAPK1P53355 1430 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 RELNP78509 3460 aa1.82□□□□□ -2.12
FOXN3-217ENST00000557572 TCHHQ07283 1943 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 C2CD3Q4AC94 2353 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 SMG1Q96Q15 3661 aaKnown RBP1.81□□□□□ -2.12
FOXN3-217ENST00000557572 TRPM2O94759 1503 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 CEP250Q9BV73 2442 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 PHRF1Q9P1Y6 1649 aaKnown RBP1.81□□□□□ -2.12
FOXN3-217ENST00000557572 NRAPQ86VF7 1730 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 LOC400499M0QZD8 3231 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 CXorf51AA0A1B0GTR3 108 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 FAUP35544 74 aaKnown RBP1.81□□□□□ -2.12
FOXN3-217ENST00000557572 DEFB134Q4QY38 66 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 Q5BKY6 102 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 Q8N9L7 120 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 C15orf53Q8NAA6 179 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 SPACA4Q8TDM5 124 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 AMELYQ99218 206 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 TIMM21Q9BVV7 248 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 MRPL35Q9NZE8 188 aaKnown RBP1.81□□□□□ -2.12
FOXN3-217ENST00000557572 PSORS1C2Q9UIG4 136 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 LTBP2Q14767 1821 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 FAM186AA6NE01 2351 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 FREM2Q5SZK8 3169 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 ATP7BP35670 1465 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 FREM3P0C091 2139 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
FOXN3-217ENST00000557572 SPTA1P02549 2419 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 POLQO75417 2590 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 TANC1Q9C0D5 1861 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 TRAV2A0A0B4J234 112 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 A0A0G2JQZ4 141 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 F8W1H4 67 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 GYPAP02724 150 aa1.8□□□□□ -2.12
FOXN3-217ENST00000557572 CTSGP08311 255 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms