RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 HERVK_113P63121 156 aa9.48□□□□□ -0.89
CPSF7-223ENST00000544669 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
CPSF7-223ENST00000544669 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
CPSF7-223ENST00000544669 DAZ4Q86SG3 579 aaKnown RBP9.48□□□□□ -0.89
CPSF7-223ENST00000544669 DAZ3Q9NR90 486 aaKnown RBP9.48□□□□□ -0.89
CPSF7-223ENST00000544669 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
CPSF7-223ENST00000544669 IGHV3-73A0A0B4J1V6 119 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
CPSF7-223ENST00000544669 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
CPSF7-223ENST00000544669 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 TCL1BO95988 128 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 DEFB104AQ8WTQ1 72 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
CPSF7-223ENST00000544669 SPTAN1Q13813 2472 aaKnown RBP9.47□□□□□ -0.89
CPSF7-223ENST00000544669 AGRNO00468 2067 aa9.46□□□□□ -0.89
CPSF7-223ENST00000544669 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.9
CPSF7-223ENST00000544669 FHL3Q13643 280 aa9.46□□□□□ -0.9
CPSF7-223ENST00000544669 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.9
CPSF7-223ENST00000544669 MTURNQ8N3F0 131 aa9.46□□□□□ -0.9
CPSF7-223ENST00000544669 ZNF843Q8N446 348 aa9.46□□□□□ -0.9
CPSF7-223ENST00000544669 RELNP78509 3460 aa9.46□□□□□ -0.9
CPSF7-223ENST00000544669 AZU1P20160 251 aa9.45□□□□□ -0.9
CPSF7-223ENST00000544669 MIAQ16674 131 aa9.45□□□□□ -0.9
CPSF7-223ENST00000544669 Q1RN00 199 aa9.45□□□□□ -0.9
CPSF7-223ENST00000544669 Q6ZSV7 163 aa9.45□□□□□ -0.9
CPSF7-223ENST00000544669 ZNF418Q8TF45 676 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-223ENST00000544669 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
CPSF7-223ENST00000544669 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 TRAV4A0A0B4J268 109 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 H7C423 109 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 CCL24O00175 119 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 PRSS2P07478 247 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 PROK1P58294 105 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 IL17DQ8TAD2 202 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 PPDPFQ9H3Y8 114 aa9.44□□□□□ -0.9
CPSF7-223ENST00000544669 NCOR2Q9Y618 2525 aa9.43□□□□□ -0.9
CPSF7-223ENST00000544669 PRRC2AP48634 2157 aaKnown RBP9.43□□□□□ -0.9
CPSF7-223ENST00000544669 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
CPSF7-223ENST00000544669 NDUFA1O15239 70 aa9.43□□□□□ -0.9
CPSF7-223ENST00000544669 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-223ENST00000544669 FAM104AQ969W3 186 aa9.43□□□□□ -0.9
CPSF7-223ENST00000544669 SLC25A20O43772 301 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 ODF3L2Q3SX64 289 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 K7EQD1 137 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 Q6ZSN1 163 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 LITAFQ99732 161 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 C16orf95Q9H693 158 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
CPSF7-223ENST00000544669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-223ENST00000544669 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
CPSF7-223ENST00000544669 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-223ENST00000544669 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
CPSF7-223ENST00000544669 HERV-K104P63124 156 aa9.41□□□□□ -0.9
CPSF7-223ENST00000544669 Q6ZUT4 128 aa9.41□□□□□ -0.9
CPSF7-223ENST00000544669 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
CPSF7-223ENST00000544669 PKD1L2Q7Z442 2459 aa9.41□□□□□ -0.9
CPSF7-223ENST00000544669 A0A1B0GV72 72 aa9.4□□□□□ -0.9
CPSF7-223ENST00000544669 KRTAP10-9P60411 292 aa9.4□□□□□ -0.9
CPSF7-223ENST00000544669 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.9
CPSF7-223ENST00000544669 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.9
CPSF7-223ENST00000544669 TMEM101Q96IK0 257 aa9.4□□□□□ -0.9
CPSF7-223ENST00000544669 CEMP1Q6PRD7 247 aaPredicted RBP9.4□□□□□ -0.91
CPSF7-223ENST00000544669 SFTA2Q6UW10 78 aa9.4□□□□□ -0.91
CPSF7-223ENST00000544669 CHD8Q9HCK8 2581 aa9.4□□□□□ -0.91
CPSF7-223ENST00000544669 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 C9JAW5 83 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 PRB1P04280 392 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
CPSF7-223ENST00000544669 H3BT86 120 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 SPINK8P0C7L1 97 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 UBE2L6O14933 153 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
CPSF7-223ENST00000544669 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
CPSF7-223ENST00000544669 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
CPSF7-223ENST00000544669 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
CPSF7-223ENST00000544669 BBC3Q96PG8 261 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-223ENST00000544669 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
CPSF7-223ENST00000544669 IGHV3-38A0A0C4DH36 116 aa9.36□□□□□ -0.91
CPSF7-223ENST00000544669 H7C2G1 150 aa9.36□□□□□ -0.91
CPSF7-223ENST00000544669 INSL3P51460 131 aa9.36□□□□□ -0.91
CPSF7-223ENST00000544669 ADARB2-AS1A8MUL3 147 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 LINC00242Q5T6M2 205 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 OVOL2Q9BRP0 275 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 CSPG4Q6UVK1 2322 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
CPSF7-223ENST00000544669 ADAMTSL4-AS1Q5T5F5 129 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 CARD19Q96LW7 228 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
CPSF7-223ENST00000544669 DOPEY2Q9Y3R5 2298 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms