RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 APLNQ9ULZ1 77 aa7.43□□□□□ -1.22
NPIPB3-210ENST00000542817 A0A0J9YY99 117 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 TRBV6-4A0A1B0GX49 114 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 A6NJY4 79 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 C3orf84H3BNL1 204 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 K7ERU9 68 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 CIDEAO60543 219 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 P0DMU3 169 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 FAM231AP0DMU4 169 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 FAM231CP0DMU5 169 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 HINT1P49773 126 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 MRPL54Q6P161 138 aaKnown RBP7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 AP1S3Q96PC3 154 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
NPIPB3-210ENST00000542817 TRGV4A0A0C4DH28 118 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 IGLL5B9A064 214 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 H3BNG1 76 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 M0QY20 66 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 RHODO00212 210 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 HSBP1O75506 76 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 RIGQ13278 110 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 TMEM70Q9BUB7 260 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 CST9LQ9H4G1 147 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
NPIPB3-210ENST00000542817 A0A096LPF7 62 aa7.4□□□□□ -1.22
NPIPB3-210ENST00000542817 K7EQD1 137 aa7.4□□□□□ -1.22
NPIPB3-210ENST00000542817 TAX1BP3O14907 124 aa7.4□□□□□ -1.22
NPIPB3-210ENST00000542817 CAMPP49913 170 aa7.4□□□□□ -1.22
NPIPB3-210ENST00000542817 AMN1Q8IY45 258 aa7.4□□□□□ -1.22
NPIPB3-210ENST00000542817 FRAS1Q86XX4 4008 aa7.4□□□□□ -1.23
NPIPB3-210ENST00000542817 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 PAX4O43316 350 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 HBBP68871 147 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 SLAQ13239 276 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 VAMP3Q15836 100 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 BVES-AS1Q5T3Y7 98 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 FAM104BQ5XKR9 115 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 SLC25A34Q6PIV7 304 aa7.39□□□□□ -1.23
NPIPB3-210ENST00000542817 A0A1B0GW15 77 aa7.38□□□□□ -1.23
NPIPB3-210ENST00000542817 GYPEP15421 78 aa7.38□□□□□ -1.23
NPIPB3-210ENST00000542817 SEC11AP67812 179 aa7.38□□□□□ -1.23
NPIPB3-210ENST00000542817 SPATA12Q7Z6I5 190 aa7.38□□□□□ -1.23
NPIPB3-210ENST00000542817 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
NPIPB3-210ENST00000542817 DNAH17Q9UFH2 4485 aa7.38□□□□□ -1.23
NPIPB3-210ENST00000542817 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 MGPP08493 103 aa7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 RHOHQ15669 191 aa7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 ZNF56Q15929 161 aa7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 KIAA1644Q3SXP7 199 aa7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 MRPL51Q4U2R6 128 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 FAM19A2Q8N3H0 131 aa7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 KLK5Q9Y337 293 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-210ENST00000542817 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 SMKR1H3BMG3 65 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 SIVA1O15304 175 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 SMIM17P0DL12 118 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 UBE2D3P61077 147 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 UBE2D2P62837 147 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 ESRGQ1W209 222 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 NRACQ8N912 160 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 FAT2Q9NYQ8 4349 aa7.36□□□□□ -1.23
NPIPB3-210ENST00000542817 GAGE12JA6NER3 117 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 PRSS47A8MTI9 375 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 F5H697 171 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 NCR2O95944 276 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 NUDT3O95989 172 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 TCTAP57738 103 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 GAGE4Q13068 117 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 GAGE5Q13069 117 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 GAGE13Q4V321 117 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 MPV17L2Q567V2 206 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 VPS25Q9BRG1 176 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
NPIPB3-210ENST00000542817 H3BRM9 83 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 LINC01545Q5VT33 79 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 LYPD5Q6UWN5 251 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 GTF2H5Q6ZYL4 71 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 ZNRF2Q8NHG8 242 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 HSPB8Q9UJY1 196 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 LINC00588Q9Y4M8 146 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 ICOSQ9Y6W8 199 aa7.34□□□□□ -1.23
NPIPB3-210ENST00000542817 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
NPIPB3-210ENST00000542817 TRBV6-5A0A0K0K1A5 114 aa7.33□□□□□ -1.24
NPIPB3-210ENST00000542817 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
NPIPB3-210ENST00000542817 COX8AP10176 69 aa7.33□□□□□ -1.24
NPIPB3-210ENST00000542817 MRAP2Q96G30 205 aa7.33□□□□□ -1.24
NPIPB3-210ENST00000542817 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
NPIPB3-210ENST00000542817 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms